DNATCO v4.1: results

HIV-1 DIS RNA subtype F- monoclinic form

Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1zci_A_C1_5BU2	AAA	AA00	85	0.18	AA00
02	1zci_A_5BU2_U3	AAA	AA00	97	0.11	AA00
03	1zci_A_U3_G4	AAA	AA00	95	0.12	AA00
04	1zci_A_G4_C5	AAA	AA00	87	0.09	AA00
05	1zci_A_C5_U6	AAA	AA00	94	0.16	AA00
06	1zci_A_U6_G7	AAA	AA00	92	0.15	AA00
07	1zci_A_G7_A8	OPN	OP06	72	0.38	OP06
08	1zci_A_A8_A9	A-B	AB05	55	0.20	AB05
09	1zci_A_A9_G10	NAN	NANT	0	1.46	OP05
10	1zci_A_G10_U11	AAA	AA00	82	0.17	AA00
11	1zci_A_U11_G12	AAA	AA00	92	0.20	AA00
12	1zci_A_G12_C13	AAA	AA00	94	0.15	AA00
13	1zci_A_C13_A14	AAA	AA00	96	0.08	AA00
14	1zci_A_A14_C15	AAA	AA00	85	0.15	AA00
15	1zci_A_C15_A16	AAA	AA00	95	0.19	AA00
16	1zci_A_A16_C17	AAA	AA00	81	0.21	AA00
17	1zci_A_C17_A18	AAA	AA00	96	0.13	AA00
18	1zci_A_A18_G19	AAA	AA00	97	0.10	AA00
19	1zci_A_G19_C20	AAA	AA00	92	0.14	AA00
20	1zci_A_C20_A21	AAA	AA00	89	0.09	AA00
21	1zci_A_A21_A22	AAA	AA00	89	0.10	AA00
22	1zci_A_A22_G23	AAA	AA00	95	0.17	AA00
23	1zci_B_C1_5BU2	AAA	AA00	86	0.20	AA00
24	1zci_B_5BU2_U3	AAA	AA00	93	0.12	AA00
25	1zci_B_U3_G4	AAA	AA00	94	0.10	AA00
26	1zci_B_G4_C5	AAA	AA00	92	0.10	AA00
27	1zci_B_C5_U6	AAA	AA00	88	0.18	AA00
28	1zci_B_U6_G7	AAA	AA00	89	0.14	AA00
29	1zci_B_G7_A8	OPN	OP06	57	0.38	OP06
30	1zci_B_A8_A9	A-B	AB05	50	0.21	AB05
31	1zci_B_A9_G10	NAN	NANT	0	1.45	OP05
32	1zci_B_G10_U11	AAA	AA00	73	0.16	AA00
33	1zci_B_U11_G12	AAA	AA00	92	0.17	AA00
34	1zci_B_G12_C13	AAA	AA00	96	0.12	AA00
35	1zci_B_C13_A14	AAA	AA00	97	0.11	AA00
36	1zci_B_A14_C15	AAA	AA00	91	0.11	AA00
37	1zci_B_C15_A16	AAA	AA00	93	0.22	AA00
38	1zci_B_A16_C17	AAA	AA00	88	0.18	AA00
39	1zci_B_C17_A18	AAA	AA00	97	0.11	AA00
40	1zci_B_A18_G19	AAA	AA00	97	0.08	AA00
41	1zci_B_G19_C20	AAA	AA00	92	0.14	AA00
42	1zci_B_C20_A21	AAA	AA00	90	0.09	AA00
43	1zci_B_A21_A22	AAA	AA00	92	0.10	AA00
44	1zci_B_A22_G23	AAA	AA00	97	0.16	AA00
45	1zci_C_C1_5BU2	AAA	AA00	82	0.19	AA00
46	1zci_C_5BU2_U3	AAA	AA00	95	0.12	AA00
47	1zci_C_U3_G4	AAA	AA00	91	0.15	AA00
48	1zci_C_G4_C5	AAA	AA00	95	0.11	AA00
49	1zci_C_C5_U6	AAA	AA00	91	0.16	AA00
50	1zci_C_U6_G7	AAA	AA00	93	0.15	AA00
51	1zci_C_G7_A8	NAN	NANT	0	0.42	OP06
52	1zci_C_A8_A9	A-B	AB05	48	0.22	AB05
53	1zci_C_A9_G10	NAN	NANT	0	1.47	OP05
54	1zci_C_G10_U11	AAA	AA00	81	0.16	AA00
55	1zci_C_U11_G12	AAA	AA00	91	0.21	AA00
56	1zci_C_G12_C13	AAA	AA00	93	0.16	AA00
57	1zci_C_C13_A14	AAA	AA00	94	0.09	AA00
58	1zci_C_A14_C15	AAA	AA00	80	0.14	AA00
59	1zci_C_C15_A16	AAA	AA00	93	0.19	AA00
60	1zci_C_A16_C17	AAA	AA00	81	0.20	AA00
61	1zci_C_C17_A18	AAA	AA00	94	0.13	AA00
62	1zci_C_A18_G19	AAA	AA00	97	0.10	AA00
63	1zci_C_G19_C20	AAA	AA00	92	0.14	AA00
64	1zci_C_C20_A21	AAA	AA00	91	0.08	AA00
65	1zci_C_A21_A22	AAA	AA00	83	0.12	AA00
66	1zci_C_A22_G23	AAA	AA00	92	0.16	AA00
67	1zci_D_C1_5BU2	AAA	AA00	87	0.18	AA00
68	1zci_D_5BU2_U3	AAA	AA00	95	0.12	AA00
69	1zci_D_U3_G4	AAA	AA00	97	0.09	AA00
70	1zci_D_G4_C5	AAA	AA00	89	0.10	AA00
71	1zci_D_C5_U6	AAA	AA00	82	0.18	AA00
72	1zci_D_U6_G7	AAA	AA00	83	0.15	AA00
73	1zci_D_G7_A8	OPN	OP06	62	0.39	OP06
74	1zci_D_A8_A9	A-B	AB01	20	0.42	AB01
75	1zci_D_A9_G10	NAN	NANT	0	1.46	OP05
76	1zci_D_G10_U11	AAA	AA00	83	0.16	AA00
77	1zci_D_U11_G12	AAA	AA00	94	0.17	AA00
78	1zci_D_G12_C13	AAA	AA00	93	0.14	AA00
79	1zci_D_C13_A14	AAA	AA00	94	0.10	AA00
80	1zci_D_A14_C15	AAA	AA00	91	0.11	AA00
81	1zci_D_C15_A16	AAA	AA00	89	0.22	AA00
82	1zci_D_A16_C17	AAA	AA00	83	0.19	AA00
83	1zci_D_C17_A18	AAA	AA00	96	0.12	AA00
84	1zci_D_A18_G19	AAA	AA00	96	0.08	AA00
85	1zci_D_G19_C20	AAA	AA00	94	0.13	AA00
86	1zci_D_C20_A21	AAA	AA00	91	0.08	AA00
87	1zci_D_A21_A22	AAA	AA00	94	0.09	AA00
88	1zci_D_A22_G23	AAA	AA00	88	0.17	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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