DNATCO v4.1: results

Crystal structure of 7S.S SRP RNA of M. jannaschii

Results of the assignment of 100 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1z43_A_G138_C139	NAN	NANT	0	0.40	AA08
002	1z43_A_C139_U140	NAN	NANT	0	0.37	AA00
003	1z43_A_U140_C141	NAN	NANT	0	0.23	AA04
004	1z43_A_C141_G142	AAA	AA00	59	0.26	AA00
005	1z43_A_G142_G143	NAN	NANT	0	0.35	AA04
006	1z43_A_G143_C144	AAA	AA08	72	0.23	AA08
007	1z43_A_C144_G145	AAA	AA08	66	0.27	AA08
008	1z43_A_G145_G146	A-B	AB05	38	0.42	AB05
009	1z43_A_G146_U147	NAN	NANT	0	0.65	OP16
010	1z43_A_U147_G148	AAw	AA06	18	0.37	AA06
011	1z43_A_G148_G149	AAw	AA06	20	0.33	AA06
012	1z43_A_G149_G150	NAN	NANT	0	0.45	AA00
013	1z43_A_G150_G151	AAw	AA06	52	0.31	AA06
014	1z43_A_G151_G152	NAN	NANT	0	0.58	AA11
015	1z43_A_G152_A153	AAA	AA08	66	0.39	AA08
016	1z43_A_A153_G154	AAw	AA05	51	0.30	AA05
017	1z43_A_G154_C155	AAw	AA11	55	0.30	AA11
018	1z43_A_C155_A156	NAN	NANT	0	0.66	AA08
019	1z43_A_A156_U157	AAu	AA12	28	0.51	AA12
020	1z43_A_U157_C158	NAN	NANT	0	0.52	AA10
021	1z43_A_C158_U159	NAN	NANT	0	0.93	AA04
022	1z43_A_U159_C160	AAw	AA06	58	0.30	AA06
023	1z43_A_C160_C161	NAN	NANT	0	0.63	AA04
024	1z43_A_C161_U162	AAw	AA06	79	0.29	AA06
025	1z43_A_U162_G163	AAA	AA08	13	0.45	AA08
026	1z43_A_G163_U164	NAN	NANT	0	0.66	OP04
027	1z43_A_U164_A165	AAA	AA08	16	0.40	AA08
028	1z43_A_A165_G166	NAN	NANT	0	0.50	AA10
029	1z43_A_G166_G167	NAN	NANT	0	1.35	AA08
030	1z43_A_G167_G168	NAN	NANT	0	0.48	AA10
031	1z43_A_G168_G169	NAN	NANT	0	0.75	AA11
032	1z43_A_G169_A170	NAN	NANT	0	0.40	AA06
033	1z43_A_A170_G171	NAN	NANT	0	0.65	AB04
034	1z43_A_G171_A172	NAN	NANT	0	0.60	AA10
035	1z43_A_A172_U173	NAN	NANT	0	0.79	AB04
036	1z43_A_U173_G174	NAN	NANT	0	0.93	AA10
037	1z43_A_G174_U175	A-B	AB04	29	0.41	AB04
038	1z43_A_U175_A176	NAN	NANT	0	0.68	OP09
039	1z43_A_A176_A177	NAN	NANT	0	0.54	BB00
040	1z43_A_A177_C178	NAN	NANT	0	0.60	OP12
041	1z43_A_C178_C179	NAN	NANT	0	0.51	AA10
042	1z43_A_C179_C180	NAN	NANT	0	0.53	AA10
043	1z43_A_C180_C181	AAA	AA04	48	0.45	AA04
044	1z43_A_C181_C182	AAA	AA08	79	0.25	AA08
045	1z43_A_C182_U183	AAA	AA00	43	0.24	AA00
046	1z43_A_U183_U184	AAA	AA08	24	0.26	AA08
047	1z43_A_U184_U185	NAN	NANT	0	0.34	OP04
048	1z43_A_U185_A186	NAN	NANT	0	0.47	AB2S
049	1z43_A_A186_C187	NAN	NANT	0	1.65	OP24
050	1z43_A_C187_C188	NAN	NANT	0	0.43	AA10
051	1z43_A_C188_U189	AAA	AA08	24	0.35	AA08
052	1z43_A_U189_G190	AAA	AA03	79	0.23	AA03
053	1z43_A_G190_C191	NAN	NANT	0	0.28	AA03
054	1z43_A_C191_C192	AAw	AA10	50	0.31	AA10
055	1z43_A_C192_G193	NAN	NANT	0	0.46	AA05
056	1z43_A_G193_A194	NAN	NANT	0	1.55	IC03
057	1z43_A_A194_A195	NAN	NANT	0	1.44	BA16
058	1z43_A_A195_C196	NAN	NANT	0	1.13	BB14
059	1z43_A_C196_C197	NAN	NANT	0	0.87	AA05
060	1z43_A_C197_C198	NAN	NANT	0	1.42	AA12
061	1z43_A_C198_C199	AAA	AA00	52	0.31	AA00
062	1z43_A_C199_G200	AAw	AA10	55	0.27	AA10
063	1z43_A_G200_C201	AAA	AA08	36	0.40	AA08
064	1z43_A_C201_C202	NAN	NANT	0	0.41	AA01
065	1z43_A_C202_A203	AAu	AA13	17	0.30	AA13
066	1z43_A_A203_G204	AAA	AA04	38	0.45	AA04
067	1z43_A_G204_G205	AAw	AA05	48	0.27	AA05
068	1z43_A_G205_C206	AAA	AA04	19	0.44	AA04
069	1z43_A_C206_C207	AAA	AA08	27	0.33	AA08
070	1z43_A_C207_C208	AAA	AA00	6	0.32	AA00
071	1z43_A_C208_G209	AAA	AA00	11	0.33	AA00
072	1z43_A_G209_G210	NAN	NANT	0	0.41	OP04
073	1z43_A_G210_A211	AAA	AA04	33	0.40	AA04
074	1z43_A_A211_A212	AAA	AA04	57	0.34	AA04
075	1z43_A_A212_G213	NAN	NANT	0	0.67	AA10
076	1z43_A_G213_G214	AAA	AA00	50	0.20	AA00
077	1z43_A_G214_G215	AAA	AA00	40	0.30	AA00
078	1z43_A_G215_A216	AAw	AA11	59	0.28	AA11
079	1z43_A_A216_G217	AAA	AA08	41	0.59	AA08
080	1z43_A_G217_C218	AAu	AA07	57	0.43	AA07
081	1z43_A_C218_A219	AAA	AA04	90	0.33	AA04
082	1z43_A_A219_A220	AAA	AA00	31	0.44	AA00
083	1z43_A_A220_C221	AAA	AA04	26	0.45	AA04
084	1z43_A_C221_G222	AAA	AA00	26	0.33	AA00
085	1z43_A_G222_G223	NAN	NANT	0	0.63	AA05
086	1z43_A_G223_U224	AAw	AA01	49	0.29	AA01
087	1z43_A_U224_A225	AAA	AA00	57	0.35	AA00
088	1z43_A_A225_G226	AAA	AA08	14	0.56	AA08
089	1z43_A_G226_G227	NAN	NANT	0	0.82	IC03
090	1z43_A_G227_C228	NAN	NANT	0	0.52	AA06
091	1z43_A_C228_A229	NAN	NANT	0	0.47	AA06
092	1z43_A_A229_G230	AAw	AA11	55	0.41	AA11
093	1z43_A_G230_G231	AAA	AA03	54	0.35	AA03
094	1z43_A_G231_A232	NAN	NANT	0	0.48	AA01
095	1z43_A_A232_C233	AAA	AA00	49	0.29	AA00
096	1z43_A_C233_G234	AAA	AA04	85	0.27	AA04
097	1z43_A_G234_U235	AAA	AA08	27	0.27	AA08
098	1z43_A_U235_C236	NAN	NANT	0	0.38	AA03
099	1z43_A_C236_G237	AAA	AA04	25	0.36	AA04
100	1z43_A_G237_G238	AAw	AA06	15	0.47	AA06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 100 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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