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Conformers: ABBIImiBZICOPNSYNN
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The structure of an enzyme-activating fragment of human telomerase RNA

Results of the assignment of 310 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0011z31-m10_A_G257_A258NANNANT00.35 AA01
0021z31-m1_A_G257_A258NANNANT00.32 AA01
0031z31-m2_A_G257_A258NANNANT00.35 AA01
0041z31-m3_A_G257_A258NANNANT00.32 AA01
0051z31-m4_A_G257_A258NANNANT00.32 AA01
0061z31-m5_A_G257_A258NANNANT00.33 AA01
0071z31-m6_A_G257_A258NANNANT00.33 AA01
0081z31-m7_A_G257_A258NANNANT00.36 AA01
0091z31-m8_A_G257_A258NANNANT00.29 AA01
0101z31-m9_A_G257_A258NANNANT00.33 AA01
0111z31-m10_A_A258_G259NANNANT00.31 AA01
0121z31-m1_A_A258_G259NANNANT00.31 AA01
0131z31-m2_A_A258_G259NANNANT00.33 AA01
0141z31-m3_A_A258_G259NANNANT00.32 AA01
0151z31-m4_A_A258_G259NANNANT00.31 AA01
0161z31-m5_A_A258_G259NANNANT00.32 AA01
0171z31-m6_A_A258_G259NANNANT00.32 AA01
0181z31-m7_A_A258_G259NANNANT00.32 AA01
0191z31-m8_A_A258_G259NANNANT00.28 AA01
0201z31-m9_A_A258_G259NANNANT00.32 AA01
0211z31-m10_A_G259_G260AAAAA04220.42 AA04
0221z31-m1_A_G259_G260AAAAA04250.39 AA04
0231z31-m2_A_G259_G260AAAAA04250.40 AA04
0241z31-m3_A_G259_G260AAAAA04250.41 AA04
0251z31-m4_A_G259_G260AAAAA04210.41 AA04
0261z31-m5_A_G259_G260AAAAA04250.39 AA04
0271z31-m6_A_G259_G260AAAAA04240.40 AA04
0281z31-m7_A_G259_G260AAAAA04240.41 AA04
0291z31-m8_A_G259_G260AAAAA04250.39 AA04
0301z31-m9_A_G259_G260AAAAA04230.41 AA04
0311z31-m10_A_G260_U261NANNANT00.54 BA10
0321z31-m1_A_G260_U261NANNANT00.34 AA01
0331z31-m2_A_G260_U261NANNANT00.52 BA10
0341z31-m3_A_G260_U261NANNANT00.40 AA01
0351z31-m4_A_G260_U261NANNANT00.35 AA01
0361z31-m5_A_G260_U261NANNANT00.54 BA10
0371z31-m6_A_G260_U261NANNANT00.52 BA10
0381z31-m7_A_G260_U261NANNANT00.54 BA10
0391z31-m8_A_G260_U261NANNANT00.46 AA01
0401z31-m9_A_G260_U261NANNANT00.33 AA01
0411z31-m10_A_U261_C262NANNANT00.95 AA10
0421z31-m1_A_U261_C262NANNANT00.93 BB13
0431z31-m2_A_U261_C262NANNANT00.82 AA10
0441z31-m3_A_U261_C262NANNANT00.64 AA10
0451z31-m4_A_U261_C262NANNANT01.01 BB1S
0461z31-m5_A_U261_C262NANNANT00.66 IC03
0471z31-m6_A_U261_C262NANNANT00.88 AA11
0481z31-m7_A_U261_C262NANNANT00.94 AA10
0491z31-m8_A_U261_C262NANNANT00.92 AA11
0501z31-m9_A_U261_C262NANNANT00.80 AA10
0511z31-m10_A_C262_G263NANNANT01.15 BB14
0521z31-m1_A_C262_G263NANNANT01.31 BB10
0531z31-m2_A_C262_G263NANNANT01.27 BB10
0541z31-m3_A_C262_G263NANNANT00.94 OP26
0551z31-m4_A_C262_G263NANNANT01.24 BB14
0561z31-m5_A_C262_G263NANNANT00.96 OP26
0571z31-m6_A_C262_G263NANNANT01.21 BB14
0581z31-m7_A_C262_G263NANNANT01.18 BB14
0591z31-m8_A_C262_G263NANNANT00.92 OP26
0601z31-m9_A_C262_G263NANNANT01.23 AB02
0611z31-m10_A_G263_G264AAwAA06110.52 AA06
0621z31-m1_A_G263_G264NANNANT00.54 AA11
0631z31-m2_A_G263_G264NANNANT00.52 AA11
0641z31-m3_A_G263_G264NANNANT00.53 AA11
0651z31-m4_A_G263_G264NANNANT00.59 AA11
0661z31-m5_A_G263_G264NANNANT00.59 AA10
0671z31-m6_A_G263_G264NANNANT00.60 AA06
0681z31-m7_A_G263_G264NANNANT00.61 AA10
0691z31-m8_A_G263_G264NANNANT00.57 AA11
0701z31-m9_A_G263_G264NANNANT00.58 AA10
0711z31-m10_A_G264_C265NANNANT00.81 IC03
0721z31-m1_A_G264_C265NANNANT00.48 AB04
0731z31-m2_A_G264_C265NANNANT00.51 AB04
0741z31-m3_A_G264_C265NANNANT00.77 IC03
0751z31-m4_A_G264_C265NANNANT00.47 AB04
0761z31-m5_A_G264_C265NANNANT00.80 IC03
0771z31-m6_A_G264_C265NANNANT00.49 AB04
0781z31-m7_A_G264_C265NANNANT00.50 AB04
0791z31-m8_A_G264_C265NANNANT00.46 AB04
0801z31-m9_A_G264_C265NANNANT00.76 IC03
0811z31-m10_A_C265_C266NANNANT00.54 AA10
0821z31-m1_A_C265_C266NANNANT00.49 BA10
0831z31-m2_A_C265_C266NANNANT00.53 BA10
0841z31-m3_A_C265_C266NANNANT00.52 BA10
0851z31-m4_A_C265_C266NANNANT00.47 AA10
0861z31-m5_A_C265_C266NANNANT00.41 AA02
0871z31-m6_A_C265_C266NANNANT00.47 BA10
0881z31-m7_A_C265_C266NANNANT00.50 AA10
0891z31-m8_A_C265_C266NANNANT00.49 AA01
0901z31-m9_A_C265_C266NANNANT00.54 AA04
0911z31-m10_A_C266_C267NANNANT00.95 IC03
0921z31-m1_A_C266_C267NANNANT01.07 AB04
0931z31-m2_A_C266_C267NANNANT00.64 BA10
0941z31-m3_A_C266_C267NANNANT00.66 BA10
0951z31-m4_A_C266_C267NANNANT00.97 AB04
0961z31-m5_A_C266_C267NANNANT00.90 BB08
0971z31-m6_A_C266_C267NANNANT00.99 AB04
0981z31-m7_A_C266_C267NANNANT00.88 AB04
0991z31-m8_A_C266_C267NANNANT00.90 IC03
1001z31-m9_A_C266_C267NANNANT00.73 AA01
1011z31-m10_A_C267_G268NANNANT01.20 AB02
1021z31-m1_A_C267_G268NANNANT00.77 ZZ02
1031z31-m2_A_C267_G268NANNANT00.80 IC06
1041z31-m3_A_C267_G268NANNANT00.88 IC06
1051z31-m4_A_C267_G268NANNANT00.92 ZZ02
1061z31-m5_A_C267_G268NANNANT00.66 AB03
1071z31-m6_A_C267_G268NANNANT00.91 ZZ02
1081z31-m7_A_C267_G268NANNANT01.02 ZZ02
1091z31-m8_A_C267_G268NANNANT01.04 ZZ02
1101z31-m9_A_C267_G268NANNANT01.06 AB02
1111z31-m10_A_G268_A269NANNANT00.40 BB03
1121z31-m1_A_G268_A269NANNANT00.44 BB13
1131z31-m2_A_G268_A269NANNANT00.49 BB13
1141z31-m3_A_G268_A269NANNANT00.40 BB03
1151z31-m4_A_G268_A269NANNANT00.57 AA00
1161z31-m5_A_G268_A269NANNANT00.58 AA00
1171z31-m6_A_G268_A269NANNANT00.60 BA10
1181z31-m7_A_G268_A269NANNANT00.47 AA04
1191z31-m8_A_G268_A269NANNANT00.47 BB13
1201z31-m9_A_G268_A269NANNANT00.59 AA00
1211z31-m10_A_A269_C270NANNANT00.74 BA10
1221z31-m1_A_A269_C270NANNANT00.76 BA10
1231z31-m2_A_A269_C270NANNANT00.74 BA10
1241z31-m3_A_A269_C270NANNANT00.73 BA10
1251z31-m4_A_A269_C270NANNANT00.67 BA10
1261z31-m5_A_A269_C270NANNANT00.67 BA10
1271z31-m6_A_A269_C270NANNANT00.47 AA00
1281z31-m7_A_A269_C270NANNANT00.67 BA10
1291z31-m8_A_A269_C270NANNANT00.77 BA10
1301z31-m9_A_A269_C270NANNANT00.68 BA10
1311z31-m10_A_C270_U271AAwAA01340.32 AA01
1321z31-m1_A_C270_U271AAwAA01370.32 AA01
1331z31-m2_A_C270_U271AAwAA01360.29 AA01
1341z31-m3_A_C270_U271AAwAA01400.31 AA01
1351z31-m4_A_C270_U271NANNANT00.45 AA10
1361z31-m5_A_C270_U271AAwAA06160.54 AA06
1371z31-m6_A_C270_U271AAwAA01390.29 AA01
1381z31-m7_A_C270_U271AAwAA01330.28 AA01
1391z31-m8_A_C270_U271NANNANT00.39 AA10
1401z31-m9_A_C270_U271AAwAA06130.58 AA06
1411z31-m10_A_U271_U272NANNANT00.71 OP09
1421z31-m1_A_U271_U272NANNANT00.76 OP09
1431z31-m2_A_U271_U272NANNANT00.73 OP09
1441z31-m3_A_U271_U272NANNANT00.71 OP09
1451z31-m4_A_U271_U272NANNANT00.85 OP09
1461z31-m5_A_U271_U272NANNANT00.77 OP09
1471z31-m6_A_U271_U272NANNANT00.72 OP09
1481z31-m7_A_U271_U272NANNANT00.74 OP09
1491z31-m8_A_U271_U272NANNANT00.77 OP09
1501z31-m9_A_U271_U272NANNANT00.79 OP09
1511z31-m10_A_U272_C284NANNANT00.65 OP20
1521z31-m1_A_U272_C284NANNANT00.64 OP20
1531z31-m2_A_U272_C284NANNANT00.64 OP20
1541z31-m3_A_U272_C284NANNANT00.65 OP20
1551z31-m4_A_U272_C284NANNANT00.64 OP20
1561z31-m5_A_U272_C284NANNANT00.69 OP20
1571z31-m6_A_U272_C284NANNANT00.63 OP20
1581z31-m7_A_U272_C284NANNANT00.62 OP20
1591z31-m8_A_U272_C284NANNANT00.64 OP20
1601z31-m9_A_U272_C284NANNANT00.68 OP20
1611z31-m10_A_C284_G285NANNANT01.04 ZZ2S
1621z31-m1_A_C284_G285NANNANT00.99 ZZ2S
1631z31-m2_A_C284_G285NANNANT01.02 ZZ2S
1641z31-m3_A_C284_G285NANNANT00.97 ZZ1S
1651z31-m4_A_C284_G285NANNANT00.81 ZZ1S
1661z31-m5_A_C284_G285NANNANT00.83 ZZ1S
1671z31-m6_A_C284_G285NANNANT01.01 ZZ2S
1681z31-m7_A_C284_G285NANNANT01.00 ZZ2S
1691z31-m8_A_C284_G285NANNANT00.85 ZZ1S
1701z31-m9_A_C284_G285NANNANT00.84 ZZ1S
1711z31-m10_A_G285_G286NANNANT01.34 BA13
1721z31-m1_A_G285_G286NANNANT01.33 BA13
1731z31-m2_A_G285_G286NANNANT01.34 BA13
1741z31-m3_A_G285_G286NANNANT01.37 BA13
1751z31-m4_A_G285_G286NANNANT00.95 AA11
1761z31-m5_A_G285_G286NANNANT00.96 AA11
1771z31-m6_A_G285_G286NANNANT01.34 BA13
1781z31-m7_A_G285_G286NANNANT01.34 BA13
1791z31-m8_A_G285_G286NANNANT00.90 AAS1
1801z31-m9_A_G285_G286NANNANT00.94 AA11
1811z31-m10_A_G286_U287AAAAA00150.38 AA00
1821z31-m1_A_G286_U287AAAAA03230.37 AA03
1831z31-m2_A_G286_U287AAAAA03230.37 AA03
1841z31-m3_A_G286_U287AAAAA03250.38 AA03
1851z31-m4_A_G286_U287NANNANT00.39 AA08
1861z31-m5_A_G286_U287NANNANT00.39 AA08
1871z31-m6_A_G286_U287AAAAA00280.40 AA00
1881z31-m7_A_G286_U287AAAAA03270.38 AA03
1891z31-m8_A_G286_U287AAAAA00130.39 AA00
1901z31-m9_A_G286_U287NANNANT00.40 AA08
1911z31-m10_A_U287_C288NANNANT00.57 AA10
1921z31-m1_A_U287_C288AAwAA01140.51 AA01
1931z31-m2_A_U287_C288AAwAA01210.53 AA01
1941z31-m3_A_U287_C288AAwAA01150.52 AA01
1951z31-m4_A_U287_C288NANNANT00.42 AB04
1961z31-m5_A_U287_C288NANNANT00.42 AB04
1971z31-m6_A_U287_C288NANNANT00.46 AB04
1981z31-m7_A_U287_C288NANNANT00.42 AB04
1991z31-m8_A_U287_C288NANNANT00.40 AB04
2001z31-m9_A_U287_C288AAwAA01180.49 AA01
2011z31-m10_A_C288_A289NANNANT00.60 AA08
2021z31-m1_A_C288_A289NANNANT00.60 AA08
2031z31-m2_A_C288_A289NANNANT00.59 AA08
2041z31-m3_A_C288_A289NANNANT00.61 AA08
2051z31-m4_A_C288_A289NANNANT00.75 BA05
2061z31-m5_A_C288_A289AAAAA04160.52 AA04
2071z31-m6_A_C288_A289NANNANT00.76 BA05
2081z31-m7_A_C288_A289NANNANT00.74 BA05
2091z31-m8_A_C288_A289NANNANT00.78 BA05
2101z31-m9_A_C288_A289NANNANT00.57 AA08
2111z31-m10_A_A289_C290NANNANT00.60 AA00
2121z31-m1_A_A289_C290AAAAA00100.60 AA00
2131z31-m2_A_A289_C290AAAAA00130.57 AA00
2141z31-m3_A_A289_C290AAAAA00140.56 AA00
2151z31-m4_A_A289_C290AAAAA02400.43 AA02
2161z31-m5_A_A289_C290AAAAA0080.40 AA00
2171z31-m6_A_A289_C290AAAAA00130.51 AA00
2181z31-m7_A_A289_C290AAAAA00150.41 AA00
2191z31-m8_A_A289_C290AAAAA02350.43 AA02
2201z31-m9_A_A289_C290AAAAA00140.56 AA00
2211z31-m10_A_C290_U291NANNANT00.55 ZZ01
2221z31-m1_A_C290_U291NANNANT00.70 ZZ01
2231z31-m2_A_C290_U291NANNANT00.84 AB04
2241z31-m3_A_C290_U291NANNANT00.59 ZZ01
2251z31-m4_A_C290_U291NANNANT00.69 AA02
2261z31-m5_A_C290_U291NANNANT00.97 IC07
2271z31-m6_A_C290_U291NANNANT00.98 IC07
2281z31-m7_A_C290_U291NANNANT00.81 AA02
2291z31-m8_A_C290_U291NANNANT00.83 AB04
2301z31-m9_A_C290_U291NANNANT00.86 AB04
2311z31-m10_A_U291_G292NANNANT00.69 BA10
2321z31-m1_A_U291_G292NANNANT00.75 BB13
2331z31-m2_A_U291_G292NANNANT00.54 BB13
2341z31-m3_A_U291_G292NANNANT00.62 BB13
2351z31-m4_A_U291_G292NANNANT00.68 BB13
2361z31-m5_A_U291_G292NANNANT00.82 BA10
2371z31-m6_A_U291_G292NANNANT00.79 BB13
2381z31-m7_A_U291_G292NANNANT00.39 AA01
2391z31-m8_A_U291_G292B-ABA09150.44 BA09
2401z31-m9_A_U291_G292NANNANT00.59 BB13
2411z31-m10_A_G292_C293NANNANT00.47 AA04
2421z31-m1_A_G292_C293NANNANT00.53 AA04
2431z31-m2_A_G292_C293NANNANT00.53 AA04
2441z31-m3_A_G292_C293NANNANT00.47 AA00
2451z31-m4_A_G292_C293NANNANT00.54 AA04
2461z31-m5_A_G292_C293NANNANT00.44 AB04
2471z31-m6_A_G292_C293NANNANT00.51 AA04
2481z31-m7_A_G292_C293NANNANT00.42 AA00
2491z31-m8_A_G292_C293NANNANT00.52 AA04
2501z31-m9_A_G292_C293NANNANT00.47 AA04
2511z31-m10_A_C293_C294NANNANT00.52 AA01
2521z31-m1_A_C293_C294NANNANT00.42 AA01
2531z31-m2_A_C293_C294NANNANT00.42 AA01
2541z31-m3_A_C293_C294NANNANT00.45 AA01
2551z31-m4_A_C293_C294NANNANT00.43 AA01
2561z31-m5_A_C293_C294NANNANT00.47 AA01
2571z31-m6_A_C293_C294NANNANT00.47 AA01
2581z31-m7_A_C293_C294NANNANT00.50 AA01
2591z31-m8_A_C293_C294NANNANT00.42 AA01
2601z31-m9_A_C293_C294NANNANT00.50 AA01
2611z31-m10_A_C294_A295AAwAA01130.32 AA01
2621z31-m1_A_C294_A295AAwAA01150.33 AA01
2631z31-m2_A_C294_A295NANNANT00.41 AA10
2641z31-m3_A_C294_A295AAwAA01150.37 AA01
2651z31-m4_A_C294_A295AAwAA01170.30 AA01
2661z31-m5_A_C294_A295AAwAA01160.32 AA01
2671z31-m6_A_C294_A295AAwAA01170.32 AA01
2681z31-m7_A_C294_A295AAwAA01140.31 AA01
2691z31-m8_A_C294_A295AAwAA01190.32 AA01
2701z31-m9_A_C294_A295AAwAA01150.32 AA01
2711z31-m10_A_A295_C296AAAAA00240.37 AA00
2721z31-m1_A_A295_C296AAAAA00300.35 AA00
2731z31-m2_A_A295_C296AAAAA00280.34 AA00
2741z31-m3_A_A295_C296AAAAA00210.38 AA00
2751z31-m4_A_A295_C296AAAAA00300.37 AA00
2761z31-m5_A_A295_C296AAAAA00300.35 AA00
2771z31-m6_A_A295_C296AAAAA00310.34 AA00
2781z31-m7_A_A295_C296AAAAA00250.36 AA00
2791z31-m8_A_A295_C296AAAAA00280.36 AA00
2801z31-m9_A_A295_C296AAAAA00260.35 AA00
2811z31-m10_A_C296_C297AAAAA04450.28 AA04
2821z31-m1_A_C296_C297AAAAA04530.27 AA04
2831z31-m2_A_C296_C297AAAAA04480.28 AA04
2841z31-m3_A_C296_C297AAAAA04520.27 AA04
2851z31-m4_A_C296_C297AAAAA04520.26 AA04
2861z31-m5_A_C296_C297AAAAA04510.27 AA04
2871z31-m6_A_C296_C297AAAAA04540.27 AA04
2881z31-m7_A_C296_C297AAAAA04460.28 AA04
2891z31-m8_A_C296_C297AAAAA04590.24 AA04
2901z31-m9_A_C296_C297AAAAA04400.29 AA04
2911z31-m10_A_C297_U298AAwAA01250.32 AA01
2921z31-m1_A_C297_U298AAwAA01250.34 AA01
2931z31-m2_A_C297_U298AAwAA01270.33 AA01
2941z31-m3_A_C297_U298AAwAA01290.28 AA01
2951z31-m4_A_C297_U298AAwAA01270.33 AA01
2961z31-m5_A_C297_U298AAwAA01270.34 AA01
2971z31-m6_A_C297_U298AAwAA01260.34 AA01
2981z31-m7_A_C297_U298AAwAA01210.34 AA01
2991z31-m8_A_C297_U298AAAAA04510.34 AA04
3001z31-m9_A_C297_U298AAwAA01260.34 AA01
3011z31-m10_A_U298_C299AAAAA0040.37 AA00
3021z31-m1_A_U298_C299NANNANT00.68 AB03
3031z31-m2_A_U298_C299AAAAA0360.37 AA03
3041z31-m3_A_U298_C299AAAAA0370.37 AA03
3051z31-m4_A_U298_C299AAAAA0360.38 AA03
3061z31-m5_A_U298_C299AAAAA0350.40 AA03
3071z31-m6_A_U298_C299AAAAA0360.37 AA03
3081z31-m7_A_U298_C299AAAAA0060.39 AA00
3091z31-m8_A_U298_C299AAAAA0090.45 AA00
3101z31-m9_A_U298_C299NANNANT00.69 AB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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