DNATCO v4.1: results

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1yvp_C_G1_C2	AAA	AA00	81	0.34	AA00
02	1yvp_C_C2_IU3	A-B	AB04	45	0.34	AB04
03	1yvp_C_IU3_G4	NAN	NANT	0	0.52	AA01
04	1yvp_C_G4_G5	AAA	AA00	72	0.24	AA00
05	1yvp_C_G5_U6	AAA	AA00	57	0.28	AA00
06	1yvp_C_U6_C7	AAA	AA00	95	0.20	AA00
07	1yvp_C_C7_C8	AAA	AA00	97	0.18	AA00
08	1yvp_C_C8_G9	NAN	NANT	0	0.94	OP12
09	1yvp_C_G9_A10	AAA	AA00	65	0.31	AA00
10	1yvp_D_IU1_IU2	AAA	AA00	50	0.36	AA00
11	1yvp_D_IU2_G3	NAN	NANT	0	1.35	OP31
12	1yvp_D_G3_A4	AAA	AA00	76	0.17	AA00
13	1yvp_D_A4_C5	AAA	AA00	81	0.26	AA00
14	1yvp_D_C5_IU6	AAA	AA00	81	0.29	AA00
15	1yvp_D_IU6_A7	AAA	AA00	90	0.17	AA00
16	1yvp_D_A7_G8	AAA	AA00	74	0.28	AA00
17	1yvp_D_G8_C9	AAA	AA00	83	0.26	AA00
18	1yvp_D_C9_C10	AAA	AA00	75	0.23	AA00
19	1yvp_E_G1_C2	AAA	AA00	87	0.28	AA00
20	1yvp_E_C2_IU3	A-B	AB04	48	0.28	AB04
21	1yvp_E_IU3_G4	NAN	NANT	0	0.56	AA01
22	1yvp_E_G4_G5	AAA	AA00	74	0.23	AA00
23	1yvp_E_G5_U6	AAA	AA00	59	0.27	AA00
24	1yvp_E_U6_C7	AAA	AA00	97	0.17	AA00
25	1yvp_E_C7_C8	AAA	AA00	95	0.18	AA00
26	1yvp_E_C8_G9	NAN	NANT	0	1.00	OP12
27	1yvp_E_G9_A10	AAA	AA00	72	0.26	AA00
28	1yvp_F_IU1_IU2	AAA	AA00	73	0.36	AA00
29	1yvp_F_IU2_G3	NAN	NANT	0	1.32	OP06
30	1yvp_F_G3_A4	AAA	AA00	39	0.18	AA00
31	1yvp_F_A4_C5	AAA	AA00	85	0.32	AA00
32	1yvp_F_C5_IU6	AAA	AA00	74	0.29	AA00
33	1yvp_F_IU6_A7	AAA	AA00	76	0.21	AA00
34	1yvp_F_A7_G8	AAw	AA01	89	0.17	AA01
35	1yvp_F_G8_C9	AAA	AA00	69	0.22	AA00
36	1yvp_F_C9_C10	AAA	AA00	81	0.13	AA00
37	1yvp_G_U6_C7	NAN	NANT	0	0.82	AA07
38	1yvp_G_C7_C8	NAN	NANT	0	1.86	OP16
39	1yvp_G_C8_G9	NAN	NANT	0	0.98	OP17
40	1yvp_G_G9_A10	NAN	NANT	0	1.63	OP17
41	1yvp_H_G4_G5	NAN	NANT	0	0.79	AA04
42	1yvp_H_G5_U6	A-B	AB04	29	0.54	AB04
43	1yvp_H_U6_C7	NAN	NANT	0	0.66	OP20
44	1yvp_H_C7_C8	NAN	NANT	0	1.88	OP16
45	1yvp_H_C8_G9	NAN	NANT	0	0.99	OP17
46	1yvp_H_G9_A10	NAN	NANT	0	1.60	OP17

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

group
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