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Conformers: ABBIImiBZICOPNSYNN
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NMR structure of the apoB mRNA stem-loop and its interaction with the C to U editing APOBEC1 complementary factor

Results of the assignment of 480 detected steps in 16 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0011yng-m10_A_G1_G2AAAAA00860.16 AA00
0021yng-m11_A_G1_G2AAAAA00860.17 AA00
0031yng-m12_A_G1_G2AAAAA00920.14 AA00
0041yng-m13_A_G1_G2AAAAA00850.16 AA00
0051yng-m14_A_G1_G2AAAAA00870.17 AA00
0061yng-m15_A_G1_G2NANNANT00.60 AA01
0071yng-m16_A_G1_G2AAAAA00870.17 AA00
0081yng-m1_A_G1_G2AAAAA00200.31 AA00
0091yng-m2_A_G1_G2AAAAA00930.14 AA00
0101yng-m3_A_G1_G2AAAAA00890.13 AA00
0111yng-m4_A_G1_G2AAAAA00860.18 AA00
0121yng-m5_A_G1_G2AAAAA00900.15 AA00
0131yng-m6_A_G1_G2AAAAA00880.15 AA00
0141yng-m7_A_G1_G2AAAAA00880.16 AA00
0151yng-m8_A_G1_G2AAAAA00900.14 AA00
0161yng-m9_A_G1_G2AAAAA00880.15 AA00
0171yng-m10_A_G2_A3AAAAA00890.17 AA00
0181yng-m11_A_G2_A3AAAAA00880.16 AA00
0191yng-m12_A_G2_A3AAAAA00890.16 AA00
0201yng-m13_A_G2_A3AAAAA00860.17 AA00
0211yng-m14_A_G2_A3AAAAA00880.16 AA00
0221yng-m15_A_G2_A3AAAAA00680.28 AA00
0231yng-m16_A_G2_A3AAAAA00880.17 AA00
0241yng-m1_A_G2_A3AAAAA00850.20 AA00
0251yng-m2_A_G2_A3AAAAA00910.15 AA00
0261yng-m3_A_G2_A3AAAAA00850.18 AA00
0271yng-m4_A_G2_A3AAAAA00880.18 AA00
0281yng-m5_A_G2_A3AAAAA00880.17 AA00
0291yng-m6_A_G2_A3AAAAA00880.18 AA00
0301yng-m7_A_G2_A3AAAAA00870.17 AA00
0311yng-m8_A_G2_A3AAAAA00880.17 AA00
0321yng-m9_A_G2_A3AAAAA00890.17 AA00
0331yng-m10_A_A3_U4AAAAA00930.16 AA00
0341yng-m11_A_A3_U4AAAAA00860.19 AA00
0351yng-m12_A_A3_U4AAAAA00890.17 AA00
0361yng-m13_A_A3_U4AAAAA00900.16 AA00
0371yng-m14_A_A3_U4AAAAA00860.18 AA00
0381yng-m15_A_A3_U4AAAAA00890.17 AA00
0391yng-m16_A_A3_U4AAAAA00910.17 AA00
0401yng-m1_A_A3_U4AAAAA00870.18 AA00
0411yng-m2_A_A3_U4AAAAA00870.18 AA00
0421yng-m3_A_A3_U4AAAAA00890.16 AA00
0431yng-m4_A_A3_U4AAAAA00910.16 AA00
0441yng-m5_A_A3_U4AAAAA00920.16 AA00
0451yng-m6_A_A3_U4AAAAA00910.17 AA00
0461yng-m7_A_A3_U4AAAAA00890.17 AA00
0471yng-m8_A_A3_U4AAAAA00900.17 AA00
0481yng-m9_A_A3_U4AAAAA00910.15 AA00
0491yng-m10_A_U4_A5AAAAA00910.14 AA00
0501yng-m11_A_U4_A5AAAAA00860.22 AA00
0511yng-m12_A_U4_A5AAAAA00890.18 AA00
0521yng-m13_A_U4_A5AAAAA00890.19 AA00
0531yng-m14_A_U4_A5AAAAA00890.21 AA00
0541yng-m15_A_U4_A5AAAAA00870.21 AA00
0551yng-m16_A_U4_A5AAAAA00890.15 AA00
0561yng-m1_A_U4_A5AAAAA00870.20 AA00
0571yng-m2_A_U4_A5AAAAA00890.18 AA00
0581yng-m3_A_U4_A5AAAAA00880.18 AA00
0591yng-m4_A_U4_A5AAAAA00950.12 AA00
0601yng-m5_A_U4_A5AAAAA00910.17 AA00
0611yng-m6_A_U4_A5AAAAA00880.19 AA00
0621yng-m7_A_U4_A5AAAAA00890.17 AA00
0631yng-m8_A_U4_A5AAAAA00910.16 AA00
0641yng-m9_A_U4_A5AAAAA00940.15 AA00
0651yng-m10_A_A5_U6AAwAA01850.27 AA01
0661yng-m11_A_A5_U6AAAAA00800.17 AA00
0671yng-m12_A_A5_U6AAAAA00840.16 AA00
0681yng-m13_A_A5_U6AAAAA00800.14 AA00
0691yng-m14_A_A5_U6AAwAA01850.23 AA01
0701yng-m15_A_A5_U6AAAAA00750.14 AA00
0711yng-m16_A_A5_U6AAAAA00650.12 AA00
0721yng-m1_A_A5_U6AAAAA00810.14 AA00
0731yng-m2_A_A5_U6AAAAA00730.15 AA00
0741yng-m3_A_A5_U6AAAAA00840.14 AA00
0751yng-m4_A_A5_U6AAAAA00720.17 AA00
0761yng-m5_A_A5_U6AAAAA00670.11 AA00
0771yng-m6_A_A5_U6AAAAA00780.17 AA00
0781yng-m7_A_A5_U6AAAAA00850.14 AA00
0791yng-m8_A_A5_U6AAAAA00760.15 AA00
0801yng-m9_A_A5_U6AAwAA01910.22 AA01
0811yng-m10_A_U6_A7NANNANT00.83 AB02
0821yng-m11_A_U6_A7AAAAA00710.18 AA00
0831yng-m12_A_U6_A7AAwAA01850.28 AA01
0841yng-m13_A_U6_A7AAAAA00710.24 AA00
0851yng-m14_A_U6_A7AAwAA01280.34 AA01
0861yng-m15_A_U6_A7AAAAA00610.26 AA00
0871yng-m16_A_U6_A7NANNANT01.34 OP24
0881yng-m1_A_U6_A7AAAAA00750.24 AA00
0891yng-m2_A_U6_A7AAAAA00640.19 AA00
0901yng-m3_A_U6_A7AAAAA00740.17 AA00
0911yng-m4_A_U6_A7AAAAA00640.19 AA00
0921yng-m5_A_U6_A7NANNANT01.20 OP24
0931yng-m6_A_U6_A7AAAAA00600.18 AA00
0941yng-m7_A_U6_A7AAAAA00770.21 AA00
0951yng-m8_A_U6_A7AAAAA00650.20 AA00
0961yng-m9_A_U6_A7AAwAA01230.43 AA01
0971yng-m10_A_A7_U8AAAAA00230.40 AA00
0981yng-m11_A_A7_U8AAAAA00520.20 AA00
0991yng-m12_A_A7_U8NANNANT00.61 AA01
1001yng-m13_A_A7_U8AAAAA00320.33 AA00
1011yng-m14_A_A7_U8NANNANT00.32 AA01
1021yng-m15_A_A7_U8AAAAA00550.27 AA00
1031yng-m16_A_A7_U8NANNANT00.51 AA01
1041yng-m1_A_A7_U8AAwAA01820.28 AA01
1051yng-m2_A_A7_U8AAAAA00510.27 AA00
1061yng-m3_A_A7_U8AAAAA00260.37 AA00
1071yng-m4_A_A7_U8AAAAA00370.27 AA00
1081yng-m5_A_A7_U8AAwAA01280.28 AA01
1091yng-m6_A_A7_U8AAwAA01460.31 AA01
1101yng-m7_A_A7_U8AAwAA01620.24 AA01
1111yng-m8_A_A7_U8AAAAA00370.30 AA00
1121yng-m9_A_A7_U8NANNANT00.40 AA01
1131yng-m10_A_U8_G9NANNANT00.65 AB02
1141yng-m11_A_U8_G9NANNANT01.41 OP24
1151yng-m12_A_U8_G9NANNANT01.49 OP24
1161yng-m13_A_U8_G9NANNANT01.40 OP24
1171yng-m14_A_U8_G9AAAAA00620.34 AA00
1181yng-m15_A_U8_G9NANNANT01.42 OP24
1191yng-m16_A_U8_G9AAwAA01730.31 AA01
1201yng-m1_A_U8_G9NANNANT01.47 OP24
1211yng-m2_A_U8_G9AAAAA00450.18 AA00
1221yng-m3_A_U8_G9AAAAA00720.14 AA00
1231yng-m4_A_U8_G9NANNANT01.32 OP24
1241yng-m5_A_U8_G9AAAAA00460.36 AA00
1251yng-m6_A_U8_G9AAAAA00510.27 AA00
1261yng-m7_A_U8_G9AAAAA00620.26 AA00
1271yng-m8_A_U8_G9NANNANT01.32 OP24
1281yng-m9_A_U8_G9AAAAA00680.26 AA00
1291yng-m10_A_G9_A10AAAAA00770.19 AA00
1301yng-m11_A_G9_A10NANNANT01.32 OP24
1311yng-m12_A_G9_A10NANNANT01.35 OP24
1321yng-m13_A_G9_A10AAAAA00670.24 AA00
1331yng-m14_A_G9_A10AAwAA01800.27 AA01
1341yng-m15_A_G9_A10NANNANT00.88 AB02
1351yng-m16_A_G9_A10NANNANT01.38 OP24
1361yng-m1_A_G9_A10AAAAA00730.26 AA00
1371yng-m2_A_G9_A10NANNANT01.34 OP24
1381yng-m3_A_G9_A10NANNANT01.30 OP24
1391yng-m4_A_G9_A10AAAAA00670.29 AA00
1401yng-m5_A_G9_A10NANNANT00.79 AB02
1411yng-m6_A_G9_A10AAAAA00780.19 AA00
1421yng-m7_A_G9_A10AAAAA00530.17 AA00
1431yng-m8_A_G9_A10AAwAA01600.33 AA01
1441yng-m9_A_G9_A10AAwAA01720.24 AA01
1451yng-m10_A_A10_U11AAAAA00670.18 AA00
1461yng-m11_A_A10_U11AAAAA00720.21 AA00
1471yng-m12_A_A10_U11AAAAA00680.20 AA00
1481yng-m13_A_A10_U11AAAAA00710.19 AA00
1491yng-m14_A_A10_U11AAAAA00490.28 AA00
1501yng-m15_A_A10_U11NANNANT01.31 OP24
1511yng-m16_A_A10_U11AAAAA00680.19 AA00
1521yng-m1_A_A10_U11AAAAA00750.13 AA00
1531yng-m2_A_A10_U11AAAAA00770.22 AA00
1541yng-m3_A_A10_U11AAAAA00690.18 AA00
1551yng-m4_A_A10_U11AAAAA00510.17 AA00
1561yng-m5_A_A10_U11AAAAA00590.20 AA00
1571yng-m6_A_A10_U11AAwAA01680.25 AA01
1581yng-m7_A_A10_U11NANNANT00.63 AB02
1591yng-m8_A_A10_U11AAwAA01530.33 AA01
1601yng-m9_A_A10_U11AAwAA01550.27 AA01
1611yng-m10_A_U11_A12AAAAA00530.23 AA00
1621yng-m11_A_U11_A12AAwAA01340.26 AA01
1631yng-m12_A_U11_A12AAAAA00550.23 AA00
1641yng-m13_A_U11_A12AAAAA00560.23 AA00
1651yng-m14_A_U11_A12NANNANT00.80 AB02
1661yng-m15_A_U11_A12NANNANT00.39 AA01
1671yng-m16_A_U11_A12NANNANT01.27 OP24
1681yng-m1_A_U11_A12AAAAA00410.20 AA00
1691yng-m2_A_U11_A12AAAAA00590.20 AA00
1701yng-m3_A_U11_A12NANNANT00.70 AB02
1711yng-m4_A_U11_A12NANNANT00.73 AB02
1721yng-m5_A_U11_A12NANNANT00.58 AB02
1731yng-m6_A_U11_A12NANNANT00.98 BA16
1741yng-m7_A_U11_A12AAwAA01270.36 AA01
1751yng-m8_A_U11_A12AAAAA00550.29 AA00
1761yng-m9_A_U11_A12AAAAA00680.26 AA00
1771yng-m10_A_A12_U13AAAAA00360.20 AA00
1781yng-m11_A_A12_U13AAAAA00130.30 AA00
1791yng-m12_A_A12_U13AAAAA00420.20 AA00
1801yng-m13_A_A12_U13AAAAA00440.20 AA00
1811yng-m14_A_A12_U13AAAAA00510.22 AA00
1821yng-m15_A_A12_U13NANNANT00.46 AA00
1831yng-m16_A_A12_U13AAAAA00560.19 AA00
1841yng-m1_A_A12_U13AAAAA00280.23 AA00
1851yng-m2_A_A12_U13A-BAB01120.40 AB01
1861yng-m3_A_A12_U13AAAAA00530.22 AA00
1871yng-m4_A_A12_U13AAAAA00620.18 AA00
1881yng-m5_A_A12_U13AAAAA00480.20 AA00
1891yng-m6_A_A12_U13AAAAA00810.17 AA00
1901yng-m7_A_A12_U13AAAAA04250.42 AA04
1911yng-m8_A_A12_U13AAAAA00420.17 AA00
1921yng-m9_A_A12_U13AAAAA00710.14 AA00
1931yng-m10_A_U13_A14AAAAA00560.21 AA00
1941yng-m11_A_U13_A14AAAAA00550.29 AA00
1951yng-m12_A_U13_A14NANNANT00.49 AA01
1961yng-m13_A_U13_A14AAAAA00540.21 AA00
1971yng-m14_A_U13_A14NANNANT00.51 AB02
1981yng-m15_A_U13_A14A-BAB04210.50 AB04
1991yng-m16_A_U13_A14A-BAB01210.37 AB01
2001yng-m1_A_U13_A14NANNANT00.57 BB02
2011yng-m2_A_U13_A14NANNANT00.85 AB02
2021yng-m3_A_U13_A14A-BAB01110.36 AB01
2031yng-m4_A_U13_A14A-BAB01200.34 AB01
2041yng-m5_A_U13_A14AAAAA00570.28 AA00
2051yng-m6_A_U13_A14AAAAA00620.21 AA00
2061yng-m7_A_U13_A14A-BAB01480.29 AB01
2071yng-m8_A_U13_A14AAAAA00630.22 AA00
2081yng-m9_A_U13_A14AAAAA00520.27 AA00
2091yng-m10_A_A14_A15A-BAB05540.41 AB05
2101yng-m11_A_A14_A15A-BAB05160.48 AB05
2111yng-m12_A_A14_A15NANNANT01.10 IC07
2121yng-m13_A_A14_A15A-BAB01280.31 AB01
2131yng-m14_A_A14_A15NANNANT00.42 AB01
2141yng-m15_A_A14_A15NANNANT01.19 AB02
2151yng-m16_A_A14_A15NANNANT00.67 AB02
2161yng-m1_A_A14_A15NANNANT01.32 OP24
2171yng-m2_A_A14_A15NANNANT00.60 BB07
2181yng-m3_A_A14_A15NANNANT00.62 AB02
2191yng-m4_A_A14_A15NANNANT00.74 AB02
2201yng-m5_A_A14_A15A-BAB01110.41 AB01
2211yng-m6_A_A14_A15A-BAB05190.42 AB05
2221yng-m7_A_A14_A15BBwBB03700.29 BB03
2231yng-m8_A_A14_A15NANNANT01.29 AB05
2241yng-m9_A_A14_A15NANNANT00.72 AB04
2251yng-m10_A_A15_U16NANNANT01.75 BB15
2261yng-m11_A_A15_U16NANNANT00.50 BA01
2271yng-m12_A_A15_U16NANNANT01.56 BB15
2281yng-m13_A_A15_U16NANNANT00.96 BB20
2291yng-m14_A_A15_U16NANNANT00.47 BA08
2301yng-m15_A_A15_U16NANNANT00.65 BB07
2311yng-m16_A_A15_U16B-ABA01220.32 BA01
2321yng-m1_A_A15_U16B-ABA01160.24 BA01
2331yng-m2_A_A15_U16NANNANT00.96 OP09
2341yng-m3_A_A15_U16NANNANT00.83 OP04
2351yng-m4_A_A15_U16NANNANT01.70 BB15
2361yng-m5_A_A15_U16NANNANT00.84 OP04
2371yng-m6_A_A15_U16NANNANT00.83 OP04
2381yng-m7_A_A15_U16NANNANT01.53 BB15
2391yng-m8_A_A15_U16NANNANT00.74 OP04
2401yng-m9_A_A15_U16NANNANT01.84 BB04
2411yng-m10_A_U16_U17NANNANT02.02 AB02
2421yng-m11_A_U16_U17NANNANT01.37 BB03
2431yng-m12_A_U16_U17NANNANT00.99 OP09
2441yng-m13_A_U16_U17NANNANT00.68 OP09
2451yng-m14_A_U16_U17NANNANT00.83 OP09
2461yng-m15_A_U16_U17NANNANT00.55 OP24
2471yng-m16_A_U16_U17NANNANT02.17 OP17
2481yng-m1_A_U16_U17NANNANT01.28 OP24
2491yng-m2_A_U16_U17NANNANT02.34 OP23
2501yng-m3_A_U16_U17NANNANT01.85 AB02
2511yng-m4_A_U16_U17NANNANT02.03 AB02
2521yng-m5_A_U16_U17NANNANT01.73 OP18
2531yng-m6_A_U16_U17NANNANT01.76 OP18
2541yng-m7_A_U16_U17NANNANT02.11 BB15
2551yng-m8_A_U16_U17NANNANT01.70 BB20
2561yng-m9_A_U16_U17NANNANT01.74 BB11
2571yng-m10_A_U17_U18NANNANT00.96 BA10
2581yng-m11_A_U17_U18NANNANT01.49 OP24
2591yng-m12_A_U17_U18NANNANT01.33 OP24
2601yng-m13_A_U17_U18NANNANT01.54 BB03
2611yng-m14_A_U17_U18NANNANT01.90 OP18
2621yng-m15_A_U17_U18NANNANT01.63 BB11
2631yng-m16_A_U17_U18NANNANT01.23 BB03
2641yng-m1_A_U17_U18NANNANT00.52 AA02
2651yng-m2_A_U17_U18NANNANT01.57 BB03
2661yng-m3_A_U17_U18NANNANT01.06 OP09
2671yng-m4_A_U17_U18NANNANT02.14 OP19
2681yng-m5_A_U17_U18NANNANT02.02 OP17
2691yng-m6_A_U17_U18NANNANT02.00 OP17
2701yng-m7_A_U17_U18NANNANT01.17 BB03
2711yng-m8_A_U17_U18NANNANT01.89 OP18
2721yng-m9_A_U17_U18NANNANT02.46 OP01
2731yng-m10_A_U18_G19NANNANT01.18 OP19
2741yng-m11_A_U18_G19NANNANT00.95 BB2S
2751yng-m12_A_U18_G19NANNANT01.12 OP1S
2761yng-m13_A_U18_G19NANNANT01.21 OP19
2771yng-m14_A_U18_G19NANNANT02.08 OP1S
2781yng-m15_A_U18_G19NANNANT00.58 IC04
2791yng-m16_A_U18_G19NANNANT01.77 OP1S
2801yng-m1_A_U18_G19NANNANT00.93 IC04
2811yng-m2_A_U18_G19NANNANT01.41 OP31
2821yng-m3_A_U18_G19NANNANT01.23 OP19
2831yng-m4_A_U18_G19NANNANT01.19 OP1S
2841yng-m5_A_U18_G19NANNANT01.24 OP19
2851yng-m6_A_U18_G19NANNANT01.35 OP1S
2861yng-m7_A_U18_G19NANNANT01.23 OP19
2871yng-m8_A_U18_G19NANNANT02.43 IC04
2881yng-m9_A_U18_G19NANNANT01.21 OP1S
2891yng-m10_A_G19_A20NANNANT00.41 AAS1
2901yng-m11_A_G19_A20NANNANT01.22 BA10
2911yng-m12_A_G19_A20NANNANT00.65 OP12
2921yng-m13_A_G19_A20SYNAAS1200.43 AAS1
2931yng-m14_A_G19_A20NANNANT01.17 BA16
2941yng-m15_A_G19_A20NANNANT01.18 BA16
2951yng-m16_A_G19_A20NANNANT00.79 AAS1
2961yng-m1_A_G19_A20SYNAAS1570.48 AAS1
2971yng-m2_A_G19_A20NANNANT00.46 OPS1
2981yng-m3_A_G19_A20NANNANT00.80 AAS1
2991yng-m4_A_G19_A20NANNANT01.24 BA13
3001yng-m5_A_G19_A20NANNANT00.80 AAS1
3011yng-m6_A_G19_A20NANNANT01.28 BA10
3021yng-m7_A_G19_A20SYNAAS1280.41 AAS1
3031yng-m8_A_G19_A20NANNANT01.27 BA10
3041yng-m9_A_G19_A20NANNANT01.36 BA10
3051yng-m10_A_A20_U21NANNANT01.30 OP24
3061yng-m11_A_A20_U21AAwAA01870.24 AA01
3071yng-m12_A_A20_U21NANNANT01.29 OP24
3081yng-m13_A_A20_U21NANNANT01.30 OP24
3091yng-m14_A_A20_U21AAwAA01860.27 AA01
3101yng-m15_A_A20_U21AAAAA00600.16 AA00
3111yng-m16_A_A20_U21AAwAA01830.23 AA01
3121yng-m1_A_A20_U21AAAAA00870.11 AA00
3131yng-m2_A_A20_U21AAAAA00610.13 AA00
3141yng-m3_A_A20_U21AAwAA01840.27 AA01
3151yng-m4_A_A20_U21AAAAA00690.19 AA00
3161yng-m5_A_A20_U21AAwAA01720.34 AA01
3171yng-m6_A_A20_U21AAAAA00910.17 AA00
3181yng-m7_A_A20_U21AAAAA00800.18 AA00
3191yng-m8_A_A20_U21AAwAA01850.28 AA01
3201yng-m9_A_A20_U21AAwAA01840.29 AA01
3211yng-m10_A_U21_C22AAAAA00820.20 AA00
3221yng-m11_A_U21_C22AAwAA01670.33 AA01
3231yng-m12_A_U21_C22AAAAA00660.13 AA00
3241yng-m13_A_U21_C22AAAAA00840.19 AA00
3251yng-m14_A_U21_C22NANNANT00.81 AB02
3261yng-m15_A_U21_C22NANNANT01.37 OP24
3271yng-m16_A_U21_C22AAAAA00550.19 AA00
3281yng-m1_A_U21_C22AAAAA00880.16 AA00
3291yng-m2_A_U21_C22NANNANT01.31 OP24
3301yng-m3_A_U21_C22NANNANT00.70 AB02
3311yng-m4_A_U21_C22NANNANT01.25 OP24
3321yng-m5_A_U21_C22NANNANT00.58 AA01
3331yng-m6_A_U21_C22AAwAA01790.23 AA01
3341yng-m7_A_U21_C22AAAAA00800.23 AA00
3351yng-m8_A_U21_C22AAAAA00540.20 AA00
3361yng-m9_A_U21_C22NANNANT01.26 OP24
3371yng-m10_A_C22_A23AAwAA01480.36 AA01
3381yng-m11_A_C22_A23NANNANT01.43 OP24
3391yng-m12_A_C22_A23NANNANT01.24 OP24
3401yng-m13_A_C22_A23AAwAA01720.26 AA01
3411yng-m14_A_C22_A23AAAAA00870.12 AA00
3421yng-m15_A_C22_A23NANNANT01.39 OP24
3431yng-m16_A_C22_A23NANNANT00.59 AB02
3441yng-m1_A_C22_A23AAwAA01880.27 AA01
3451yng-m2_A_C22_A23NANNANT00.60 AB02
3461yng-m3_A_C22_A23AAAAA00680.17 AA00
3471yng-m4_A_C22_A23AAwAA01650.31 AA01
3481yng-m5_A_C22_A23NANNANT01.30 OP24
3491yng-m6_A_C22_A23AAwAA01600.34 AA01
3501yng-m7_A_C22_A23AAwAA01830.33 AA01
3511yng-m8_A_C22_A23NANNANT01.28 OP24
3521yng-m9_A_C22_A23NANNANT00.42 AA10
3531yng-m10_A_A23_G24NANNANT00.93 AA04
3541yng-m11_A_A23_G24NANNANT00.86 AA04
3551yng-m12_A_A23_G24AAAAA04330.59 AA04
3561yng-m13_A_A23_G24AAAAA04160.80 AA04
3571yng-m14_A_A23_G24AAAAA00750.25 AA00
3581yng-m15_A_A23_G24NANNANT01.28 AA12
3591yng-m16_A_A23_G24NANNANT00.97 OP24
3601yng-m1_A_A23_G24NANNANT01.46 ZZ01
3611yng-m2_A_A23_G24NANNANT01.39 OP24
3621yng-m3_A_A23_G24AAAAA04170.68 AA04
3631yng-m4_A_A23_G24NANNANT00.75 AA04
3641yng-m5_A_A23_G24AAAAA04460.46 AA04
3651yng-m6_A_A23_G24NANNANT00.94 AA04
3661yng-m7_A_A23_G24AAAAA0090.47 AA00
3671yng-m8_A_A23_G24AAAAA08270.47 AA08
3681yng-m9_A_A23_G24AAAAA08120.64 AA08
3691yng-m10_A_G24_U25NANNANT01.42 AA01
3701yng-m11_A_G24_U25NANNANT01.85 OP04
3711yng-m12_A_G24_U25NANNANT01.40 AA01
3721yng-m13_A_G24_U25NANNANT02.04 BB11
3731yng-m14_A_G24_U25AAwAA01700.28 AA01
3741yng-m15_A_G24_U25NANNANT01.07 OP24
3751yng-m16_A_G24_U25NANNANT01.27 AA01
3761yng-m1_A_G24_U25NANNANT01.43 AA11
3771yng-m2_A_G24_U25NANNANT01.45 AA01
3781yng-m3_A_G24_U25NANNANT00.74 OP28
3791yng-m4_A_G24_U25NANNANT01.38 AB02
3801yng-m5_A_G24_U25NANNANT01.60 IC04
3811yng-m6_A_G24_U25NANNANT00.74 OP28
3821yng-m7_A_G24_U25NANNANT01.58 IC04
3831yng-m8_A_G24_U25NANNANT01.57 IC04
3841yng-m9_A_G24_U25NANNANT00.79 AA12
3851yng-m10_A_U25_A26NANNANT00.53 AA01
3861yng-m11_A_U25_A26NANNANT00.57 AA05
3871yng-m12_A_U25_A26NANNANT00.58 AA02
3881yng-m13_A_U25_A26NANNANT01.48 BA10
3891yng-m14_A_U25_A26AAwAA01670.31 AA01
3901yng-m15_A_U25_A26NANNANT01.02 AA04
3911yng-m16_A_U25_A26NANNANT00.66 AA05
3921yng-m1_A_U25_A26NANNANT01.16 AA04
3931yng-m2_A_U25_A26NANNANT00.47 AA02
3941yng-m3_A_U25_A26NANNANT00.68 OP12
3951yng-m4_A_U25_A26NANNANT00.36 AA02
3961yng-m5_A_U25_A26NANNANT01.17 BA10
3971yng-m6_A_U25_A26NANNANT00.86 AA05
3981yng-m7_A_U25_A26NANNANT01.19 BA10
3991yng-m8_A_U25_A26NANNANT01.16 BA10
4001yng-m9_A_U25_A26AAwAA05230.56 AA05
4011yng-m10_A_A26_U27AAAAA00660.23 AA00
4021yng-m11_A_A26_U27AAAAA00640.28 AA00
4031yng-m12_A_A26_U27AAAAA00860.20 AA00
4041yng-m13_A_A26_U27AAAAA00540.29 AA00
4051yng-m14_A_A26_U27AAAAA00750.23 AA00
4061yng-m15_A_A26_U27AAAAA00820.19 AA00
4071yng-m16_A_A26_U27AAAAA00590.27 AA00
4081yng-m1_A_A26_U27AAAAA00800.23 AA00
4091yng-m2_A_A26_U27AAAAA00930.15 AA00
4101yng-m3_A_A26_U27NANNANT00.59 AB02
4111yng-m4_A_A26_U27AAAAA00910.16 AA00
4121yng-m5_A_A26_U27AAAAA00830.21 AA00
4131yng-m6_A_A26_U27AAAAA00750.22 AA00
4141yng-m7_A_A26_U27AAAAA00860.19 AA00
4151yng-m8_A_A26_U27AAAAA00820.19 AA00
4161yng-m9_A_A26_U27AAAAA00710.22 AA00
4171yng-m10_A_U27_A28AAAAA00930.11 AA00
4181yng-m11_A_U27_A28AAAAA00850.14 AA00
4191yng-m12_A_U27_A28AAAAA00920.11 AA00
4201yng-m13_A_U27_A28AAAAA00900.12 AA00
4211yng-m14_A_U27_A28AAAAA00860.13 AA00
4221yng-m15_A_U27_A28AAAAA00890.14 AA00
4231yng-m16_A_U27_A28AAAAA00850.13 AA00
4241yng-m1_A_U27_A28AAAAA00860.13 AA00
4251yng-m2_A_U27_A28AAAAA00950.11 AA00
4261yng-m3_A_U27_A28AAAAA00920.14 AA00
4271yng-m4_A_U27_A28AAAAA00940.13 AA00
4281yng-m5_A_U27_A28AAAAA00940.12 AA00
4291yng-m6_A_U27_A28AAAAA00890.14 AA00
4301yng-m7_A_U27_A28AAAAA00920.13 AA00
4311yng-m8_A_U27_A28AAAAA00950.12 AA00
4321yng-m9_A_U27_A28AAAAA00920.12 AA00
4331yng-m10_A_A28_U29AAAAA00950.13 AA00
4341yng-m11_A_A28_U29AAAAA00900.16 AA00
4351yng-m12_A_A28_U29AAAAA00920.14 AA00
4361yng-m13_A_A28_U29AAAAA00920.14 AA00
4371yng-m14_A_A28_U29AAAAA00910.15 AA00
4381yng-m15_A_A28_U29AAAAA00930.14 AA00
4391yng-m16_A_A28_U29AAAAA00890.16 AA00
4401yng-m1_A_A28_U29AAAAA00930.13 AA00
4411yng-m2_A_A28_U29AAAAA00930.15 AA00
4421yng-m3_A_A28_U29AAAAA00920.14 AA00
4431yng-m4_A_A28_U29AAAAA00960.12 AA00
4441yng-m5_A_A28_U29AAAAA00930.15 AA00
4451yng-m6_A_A28_U29AAAAA00920.16 AA00
4461yng-m7_A_A28_U29AAAAA00930.13 AA00
4471yng-m8_A_A28_U29AAAAA00940.14 AA00
4481yng-m9_A_A28_U29AAAAA00910.16 AA00
4491yng-m10_A_U29_C30AAAAA00920.17 AA00
4501yng-m11_A_U29_C30AAAAA00900.19 AA00
4511yng-m12_A_U29_C30AAAAA00900.20 AA00
4521yng-m13_A_U29_C30AAAAA00910.18 AA00
4531yng-m14_A_U29_C30AAAAA00890.19 AA00
4541yng-m15_A_U29_C30AAAAA00920.17 AA00
4551yng-m16_A_U29_C30AAAAA00910.18 AA00
4561yng-m1_A_U29_C30AAAAA00790.18 AA00
4571yng-m2_A_U29_C30AAAAA00930.18 AA00
4581yng-m3_A_U29_C30AAAAA00910.18 AA00
4591yng-m4_A_U29_C30AAAAA00930.16 AA00
4601yng-m5_A_U29_C30AAAAA00920.18 AA00
4611yng-m6_A_U29_C30AAAAA00910.19 AA00
4621yng-m7_A_U29_C30AAAAA00910.18 AA00
4631yng-m8_A_U29_C30AAAAA00900.20 AA00
4641yng-m9_A_U29_C30AAAAA00940.14 AA00
4651yng-m10_A_C30_C31AAAAA00930.17 AA00
4661yng-m11_A_C30_C31AAAAA00910.18 AA00
4671yng-m12_A_C30_C31AAAAA00870.19 AA00
4681yng-m13_A_C30_C31AAAAA00890.18 AA00
4691yng-m14_A_C30_C31AAAAA00910.16 AA00
4701yng-m15_A_C30_C31AAAAA00880.19 AA00
4711yng-m16_A_C30_C31AAAAA00930.15 AA00
4721yng-m1_A_C30_C31NANNANT01.33 OP04
4731yng-m2_A_C30_C31AAAAA00890.16 AA00
4741yng-m3_A_C30_C31AAAAA00870.18 AA00
4751yng-m4_A_C30_C31AAAAA00940.15 AA00
4761yng-m5_A_C30_C31AAAAA00920.16 AA00
4771yng-m6_A_C30_C31AAAAA00900.17 AA00
4781yng-m7_A_C30_C31AAAAA00940.13 AA00
4791yng-m8_A_C30_C31AAAAA00860.19 AA00
4801yng-m9_A_C30_C31AAAAA00940.16 AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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