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Conformers: ABBIImiBZICOPNSYNN
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NMR structure of the apoB mRNA stem-loop and its interaction with the C to U editing APOBEC1 complementary factor

Results of the assignment of 600 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0011yne-m10_A_G1_G2AAAAA00890.13 AA00
0021yne-m11_A_G1_G2AAAAA00930.13 AA00
0031yne-m12_A_G1_G2AAAAA00910.15 AA00
0041yne-m13_A_G1_G2AAAAA00920.14 AA00
0051yne-m14_A_G1_G2AAAAA00860.18 AA00
0061yne-m15_A_G1_G2AAAAA00890.13 AA00
0071yne-m16_A_G1_G2AAAAA00910.14 AA00
0081yne-m17_A_G1_G2AAAAA00880.16 AA00
0091yne-m18_A_G1_G2AAAAA00890.15 AA00
0101yne-m19_A_G1_G2AAAAA00920.14 AA00
0111yne-m1_A_G1_G2AAAAA00870.15 AA00
0121yne-m20_A_G1_G2AAAAA00910.14 AA00
0131yne-m2_A_G1_G2AAAAA00920.14 AA00
0141yne-m3_A_G1_G2AAAAA00880.15 AA00
0151yne-m4_A_G1_G2AAAAA00870.16 AA00
0161yne-m5_A_G1_G2AAAAA00860.17 AA00
0171yne-m6_A_G1_G2AAAAA00870.15 AA00
0181yne-m7_A_G1_G2AAAAA00890.15 AA00
0191yne-m8_A_G1_G2AAAAA00850.16 AA00
0201yne-m9_A_G1_G2AAAAA00920.13 AA00
0211yne-m10_A_G2_A3AAAAA00850.17 AA00
0221yne-m11_A_G2_A3AAAAA00820.18 AA00
0231yne-m12_A_G2_A3AAAAA00850.21 AA00
0241yne-m13_A_G2_A3AAAAA00870.19 AA00
0251yne-m14_A_G2_A3AAAAA00870.18 AA00
0261yne-m15_A_G2_A3AAAAA00860.17 AA00
0271yne-m16_A_G2_A3AAAAA00870.19 AA00
0281yne-m17_A_G2_A3AAAAA00860.18 AA00
0291yne-m18_A_G2_A3AAAAA00880.18 AA00
0301yne-m19_A_G2_A3AAAAA00880.17 AA00
0311yne-m1_A_G2_A3AAAAA00850.18 AA00
0321yne-m20_A_G2_A3AAAAA00830.19 AA00
0331yne-m2_A_G2_A3AAAAA00860.17 AA00
0341yne-m3_A_G2_A3AAAAA00870.18 AA00
0351yne-m4_A_G2_A3AAAAA00870.18 AA00
0361yne-m5_A_G2_A3AAAAA00870.17 AA00
0371yne-m6_A_G2_A3AAAAA00870.17 AA00
0381yne-m7_A_G2_A3AAAAA00830.22 AA00
0391yne-m8_A_G2_A3AAAAA00860.17 AA00
0401yne-m9_A_G2_A3AAAAA00840.19 AA00
0411yne-m10_A_A3_U4AAAAA00820.19 AA00
0421yne-m11_A_A3_U4AAAAA00830.20 AA00
0431yne-m12_A_A3_U4AAAAA00930.14 AA00
0441yne-m13_A_A3_U4AAAAA00900.17 AA00
0451yne-m14_A_A3_U4AAAAA00890.17 AA00
0461yne-m15_A_A3_U4AAAAA00900.16 AA00
0471yne-m16_A_A3_U4AAAAA00890.19 AA00
0481yne-m17_A_A3_U4AAAAA00900.18 AA00
0491yne-m18_A_A3_U4AAAAA00910.16 AA00
0501yne-m19_A_A3_U4AAAAA00890.18 AA00
0511yne-m1_A_A3_U4AAAAA00880.18 AA00
0521yne-m20_A_A3_U4AAAAA00870.19 AA00
0531yne-m2_A_A3_U4AAAAA00850.19 AA00
0541yne-m3_A_A3_U4AAAAA00920.16 AA00
0551yne-m4_A_A3_U4AAAAA00900.18 AA00
0561yne-m5_A_A3_U4AAAAA00880.18 AA00
0571yne-m6_A_A3_U4AAAAA00910.16 AA00
0581yne-m7_A_A3_U4AAAAA00910.16 AA00
0591yne-m8_A_A3_U4AAAAA00880.17 AA00
0601yne-m9_A_A3_U4AAAAA00860.18 AA00
0611yne-m10_A_U4_A5AAAAA00840.23 AA00
0621yne-m11_A_U4_A5AAAAA00900.18 AA00
0631yne-m12_A_U4_A5AAAAA00960.10 AA00
0641yne-m13_A_U4_A5AAAAA00900.15 AA00
0651yne-m14_A_U4_A5AAAAA00830.22 AA00
0661yne-m15_A_U4_A5AAAAA00920.18 AA00
0671yne-m16_A_U4_A5AAAAA00900.18 AA00
0681yne-m17_A_U4_A5AAAAA00950.15 AA00
0691yne-m18_A_U4_A5AAAAA00860.22 AA00
0701yne-m19_A_U4_A5AAAAA00910.17 AA00
0711yne-m1_A_U4_A5AAAAA00890.17 AA00
0721yne-m20_A_U4_A5AAAAA00880.18 AA00
0731yne-m2_A_U4_A5AAAAA00890.20 AA00
0741yne-m3_A_U4_A5AAAAA00960.13 AA00
0751yne-m4_A_U4_A5AAAAA00880.20 AA00
0761yne-m5_A_U4_A5AAAAA00930.13 AA00
0771yne-m6_A_U4_A5AAAAA00880.21 AA00
0781yne-m7_A_U4_A5AAAAA00930.17 AA00
0791yne-m8_A_U4_A5AAAAA00890.18 AA00
0801yne-m9_A_U4_A5AAAAA00890.18 AA00
0811yne-m10_A_A5_U6AAAAA00790.17 AA00
0821yne-m11_A_A5_U6AAwAA01890.22 AA01
0831yne-m12_A_A5_U6AAAAA00850.14 AA00
0841yne-m13_A_A5_U6AAAAA00750.14 AA00
0851yne-m14_A_A5_U6AAAAA00850.19 AA00
0861yne-m15_A_A5_U6AAwAA01860.26 AA01
0871yne-m16_A_A5_U6AAAAA00360.16 AA00
0881yne-m17_A_A5_U6AAwAA01860.22 AA01
0891yne-m18_A_A5_U6AAAAA00780.18 AA00
0901yne-m19_A_A5_U6AAAAA00560.14 AA00
0911yne-m1_A_A5_U6AAAAA00640.14 AA00
0921yne-m20_A_A5_U6AAAAA00780.16 AA00
0931yne-m2_A_A5_U6AAwAA01860.24 AA01
0941yne-m3_A_A5_U6AAwAA01830.27 AA01
0951yne-m4_A_A5_U6AAAAA00800.15 AA00
0961yne-m5_A_A5_U6AAAAA00600.14 AA00
0971yne-m6_A_A5_U6AAAAA00850.15 AA00
0981yne-m7_A_A5_U6AAAAA00570.14 AA00
0991yne-m8_A_A5_U6AAAAA00760.16 AA00
1001yne-m9_A_A5_U6AAAAA00710.16 AA00
1011yne-m10_A_U6_A7AAAAA00730.21 AA00
1021yne-m11_A_U6_A7AAAAA00590.34 AA00
1031yne-m12_A_U6_A7AAwAA01390.27 AA01
1041yne-m13_A_U6_A7NANNANT01.24 OP24
1051yne-m14_A_U6_A7AAwAA01330.28 AA01
1061yne-m15_A_U6_A7AAAAA00630.30 AA00
1071yne-m16_A_U6_A7NANNANT00.69 AB02
1081yne-m17_A_U6_A7AAAAA00570.32 AA00
1091yne-m18_A_U6_A7AAwAA01210.47 AA01
1101yne-m19_A_U6_A7NANNANT01.27 OP24
1111yne-m1_A_U6_A7NANNANT00.72 AB02
1121yne-m20_A_U6_A7AAAAA00750.19 AA00
1131yne-m2_A_U6_A7AAAAA00660.30 AA00
1141yne-m3_A_U6_A7AAAAA00420.45 AA00
1151yne-m4_A_U6_A7AAAAA00700.22 AA00
1161yne-m5_A_U6_A7NANNANT00.78 AB02
1171yne-m6_A_U6_A7AAwAA01290.36 AA01
1181yne-m7_A_U6_A7AAAAA00660.20 AA00
1191yne-m8_A_U6_A7AAAAA00640.24 AA00
1201yne-m9_A_U6_A7AAAAA00560.21 AA00
1211yne-m10_A_A7_U8AAAAA00400.33 AA00
1221yne-m11_A_A7_U8AAAAA00500.23 AA00
1231yne-m12_A_A7_U8AAwAA01100.41 AA01
1241yne-m13_A_A7_U8AAwAA01340.36 AA01
1251yne-m14_A_A7_U8NANNANT00.40 AA01
1261yne-m15_A_A7_U8AAAAA00490.27 AA00
1271yne-m16_A_A7_U8AAAAA00280.35 AA00
1281yne-m17_A_A7_U8AAAAA00290.23 AA00
1291yne-m18_A_A7_U8NANNANT00.41 AA01
1301yne-m19_A_A7_U8NANNANT00.51 AA01
1311yne-m1_A_A7_U8AAAAA00560.40 AA00
1321yne-m20_A_A7_U8AAwAA01800.21 AA01
1331yne-m2_A_A7_U8AAwAA01760.25 AA01
1341yne-m3_A_A7_U8NANNANT00.78 AA10
1351yne-m4_A_A7_U8AAAAA00660.26 AA00
1361yne-m5_A_A7_U8NANNANT00.55 AA01
1371yne-m6_A_A7_U8AAAAA00170.39 AA00
1381yne-m7_A_A7_U8AAAAA00640.17 AA00
1391yne-m8_A_A7_U8AAAAA00620.27 AA00
1401yne-m9_A_A7_U8NANNANT00.53 AA01
1411yne-m10_A_U8_G9AAAAA00780.19 AA00
1421yne-m11_A_U8_G9NANNANT01.35 OP24
1431yne-m12_A_U8_G9NANNANT00.55 AA01
1441yne-m13_A_U8_G9NANNANT01.47 OP24
1451yne-m14_A_U8_G9AAAAA00650.24 AA00
1461yne-m15_A_U8_G9NANNANT01.31 OP24
1471yne-m16_A_U8_G9NANNANT00.77 AB02
1481yne-m17_A_U8_G9NANNANT00.61 AB02
1491yne-m18_A_U8_G9AAwAA01730.34 AA01
1501yne-m19_A_U8_G9AAAAA00500.22 AA00
1511yne-m1_A_U8_G9AAwAA01790.28 AA01
1521yne-m20_A_U8_G9AAAAA00490.27 AA00
1531yne-m2_A_U8_G9AAAAA00600.27 AA00
1541yne-m3_A_U8_G9NANNANT00.76 AB02
1551yne-m4_A_U8_G9AAAAA00640.17 AA00
1561yne-m5_A_U8_G9NANNANT01.33 OP24
1571yne-m6_A_U8_G9NANNANT01.37 OP24
1581yne-m7_A_U8_G9AAAAA00540.21 AA00
1591yne-m8_A_U8_G9AAAAA00610.18 AA00
1601yne-m9_A_U8_G9NANNANT01.39 OP24
1611yne-m10_A_G9_A10AAwAA01850.26 AA01
1621yne-m11_A_G9_A10NANNANT01.28 OP24
1631yne-m12_A_G9_A10AAAAA00610.25 AA00
1641yne-m13_A_G9_A10AAAAA00750.23 AA00
1651yne-m14_A_G9_A10AAAAA00790.20 AA00
1661yne-m15_A_G9_A10AAAAA00690.26 AA00
1671yne-m16_A_G9_A10AAwAA01770.34 AA01
1681yne-m17_A_G9_A10AAAAA00690.24 AA00
1691yne-m18_A_G9_A10AAAAA00580.34 AA00
1701yne-m19_A_G9_A10AAAAA00760.16 AA00
1711yne-m1_A_G9_A10AAAAA00550.27 AA00
1721yne-m20_A_G9_A10NANNANT01.33 OP24
1731yne-m2_A_G9_A10AAwAA01710.27 AA01
1741yne-m3_A_G9_A10AAAAA00780.19 AA00
1751yne-m4_A_G9_A10AAwAA01710.30 AA01
1761yne-m5_A_G9_A10AAAAA00520.35 AA00
1771yne-m6_A_G9_A10AAAAA00720.22 AA00
1781yne-m7_A_G9_A10AAAAA00420.20 AA00
1791yne-m8_A_G9_A10AAAAA00780.17 AA00
1801yne-m9_A_G9_A10AAwAA01790.34 AA01
1811yne-m10_A_A10_U11AAAAA00670.26 AA00
1821yne-m11_A_A10_U11AAAAA00770.19 AA00
1831yne-m12_A_A10_U11NANNANT01.31 OP24
1841yne-m13_A_A10_U11AAAAA00810.17 AA00
1851yne-m14_A_A10_U11AAwAA01870.25 AA01
1861yne-m15_A_A10_U11AAAAA00790.18 AA00
1871yne-m16_A_A10_U11AAAAA00630.27 AA00
1881yne-m17_A_A10_U11AAAAA00710.21 AA00
1891yne-m18_A_A10_U11AAAAA00830.16 AA00
1901yne-m19_A_A10_U11AAwAA01700.33 AA01
1911yne-m1_A_A10_U11NANNANT01.24 OP24
1921yne-m20_A_A10_U11AAAAA00640.23 AA00
1931yne-m2_A_A10_U11AAwAA01470.30 AA01
1941yne-m3_A_A10_U11AAwAA01850.23 AA01
1951yne-m4_A_A10_U11AAAAA00460.28 AA00
1961yne-m5_A_A10_U11AAAAA00710.26 AA00
1971yne-m6_A_A10_U11AAAAA00590.17 AA00
1981yne-m7_A_A10_U11NANNANT01.30 OP24
1991yne-m8_A_A10_U11AAAAA00630.17 AA00
2001yne-m9_A_A10_U11AAAAA00610.33 AA00
2011yne-m10_A_U11_A12NANNANT00.85 AB02
2021yne-m11_A_U11_A12NANNANT00.42 AA01
2031yne-m12_A_U11_A12AAAAA00630.17 AA00
2041yne-m13_A_U11_A12AAAAA00720.18 AA00
2051yne-m14_A_U11_A12NANNANT01.46 OP24
2061yne-m15_A_U11_A12AAwAA01480.36 AA01
2071yne-m16_A_U11_A12NANNANT01.33 OP24
2081yne-m17_A_U11_A12AAAAA00620.16 AA00
2091yne-m18_A_U11_A12AAAAA00660.20 AA00
2101yne-m19_A_U11_A12NANNANT00.84 AB02
2111yne-m1_A_U11_A12AAAAA00800.16 AA00
2121yne-m20_A_U11_A12NANNANT00.73 AB02
2131yne-m2_A_U11_A12AAAAA00590.31 AA00
2141yne-m3_A_U11_A12NANNANT00.35 AA01
2151yne-m4_A_U11_A12NANNANT00.70 AB02
2161yne-m5_A_U11_A12NANNANT00.95 BA09
2171yne-m6_A_U11_A12NANNANT01.28 OP24
2181yne-m7_A_U11_A12AAAAA00660.17 AA00
2191yne-m8_A_U11_A12NANNANT01.24 OP24
2201yne-m9_A_U11_A12AAAAA00600.18 AA00
2211yne-m10_A_A12_U13AAAAA00770.15 AA00
2221yne-m11_A_A12_U13NANNANT00.63 AA00
2231yne-m12_A_A12_U13AAAAA00470.23 AA00
2241yne-m13_A_A12_U13AAAAA00700.20 AA00
2251yne-m14_A_A12_U13AAAAA00500.29 AA00
2261yne-m15_A_A12_U13AAAAA00210.30 AA00
2271yne-m16_A_A12_U13AAAAA00610.18 AA00
2281yne-m17_A_A12_U13AAAAA00630.21 AA00
2291yne-m18_A_A12_U13AAAAA00470.19 AA00
2301yne-m19_A_A12_U13AAAAA00700.15 AA00
2311yne-m1_A_A12_U13A-BAB04250.44 AB04
2321yne-m20_A_A12_U13AAAAA00190.37 AA00
2331yne-m2_A_A12_U13AAAAA00590.15 AA00
2341yne-m3_A_A12_U13NANNANT00.53 AA00
2351yne-m4_A_A12_U13AAAAA00400.28 AA00
2361yne-m5_A_A12_U13AAAAA00830.15 AA00
2371yne-m6_A_A12_U13AAAAA00660.18 AA00
2381yne-m7_A_A12_U13AAAAA00260.29 AA00
2391yne-m8_A_A12_U13AAAAA00780.15 AA00
2401yne-m9_A_A12_U13AAAAA00530.19 AA00
2411yne-m10_A_U13_A14AAAAA00620.23 AA00
2421yne-m11_A_U13_A14AAAAA00520.22 AA00
2431yne-m12_A_U13_A14NANNANT00.62 AA01
2441yne-m13_A_U13_A14AAAAA00310.32 AA00
2451yne-m14_A_U13_A14AAAAA00670.17 AA00
2461yne-m15_A_U13_A14NANNANT00.52 AB02
2471yne-m16_A_U13_A14AAAAA00590.28 AA00
2481yne-m17_A_U13_A14A-BAB05640.24 AB05
2491yne-m18_A_U13_A14AAAAA00450.33 AA00
2501yne-m19_A_U13_A14AAAAA00560.18 AA00
2511yne-m1_A_U13_A14NANNANT00.92 AB02
2521yne-m20_A_U13_A14A-BAB01370.31 AB01
2531yne-m2_A_U13_A14A-BAB01190.29 AB01
2541yne-m3_A_U13_A14A-BAB01200.36 AB01
2551yne-m4_A_U13_A14NANNANT00.52 AB02
2561yne-m5_A_U13_A14AAAAA00660.18 AA00
2571yne-m6_A_U13_A14AAAAA00580.27 AA00
2581yne-m7_A_U13_A14AAAAA00660.15 AA00
2591yne-m8_A_U13_A14AAAAA00650.17 AA00
2601yne-m9_A_U13_A14AAAAA00570.27 AA00
2611yne-m10_A_A14_A15A-BAB05300.42 AB05
2621yne-m11_A_A14_A15A-BAB05520.31 AB05
2631yne-m12_A_A14_A15NANNANT01.05 ZZ01
2641yne-m13_A_A14_A15A-BAB01130.32 AB01
2651yne-m14_A_A14_A15NANNANT00.47 AB01
2661yne-m15_A_A14_A15A-BAB05400.32 AB05
2671yne-m16_A_A14_A15NANNANT01.20 AB04
2681yne-m17_A_A14_A15NANNANT00.53 OP24
2691yne-m18_A_A14_A15A-BAB05130.45 AB05
2701yne-m19_A_A14_A15A-BAB05370.32 AB05
2711yne-m1_A_A14_A15NANNANT00.57 OP24
2721yne-m20_A_A14_A15NANNANT00.80 AB02
2731yne-m2_A_A14_A15NANNANT01.27 BB00
2741yne-m3_A_A14_A15NANNANT00.51 BB07
2751yne-m4_A_A14_A15A-BAB05490.33 AB05
2761yne-m5_A_A14_A15A-BAB05470.37 AB05
2771yne-m6_A_A14_A15A-BAB05510.30 AB05
2781yne-m7_A_A14_A15A-BAB05340.32 AB05
2791yne-m8_A_A14_A15NANNANT01.54 AB04
2801yne-m9_A_A14_A15NANNANT00.41 AB01
2811yne-m10_A_A15_U16NANNANT01.71 BB08
2821yne-m11_A_A15_U16B-ABA01150.31 BA01
2831yne-m12_A_A15_U16NANNANT00.83 OP04
2841yne-m13_A_A15_U16NANNANT01.37 OP18
2851yne-m14_A_A15_U16NANNANT01.73 BB15
2861yne-m15_A_A15_U16NANNANT00.83 BB16
2871yne-m16_A_A15_U16NANNANT01.89 OP18
2881yne-m17_A_A15_U16NANNANT00.87 OP04
2891yne-m18_A_A15_U16NANNANT00.83 OP04
2901yne-m19_A_A15_U16BBBBB00210.43 BB00
2911yne-m1_A_A15_U16NANNANT00.95 BB16
2921yne-m20_A_A15_U16BBBBB01110.26 BB01
2931yne-m2_A_A15_U16NANNANT01.69 BB04
2941yne-m3_A_A15_U16NANNANT01.64 BB04
2951yne-m4_A_A15_U16NANNANT00.49 BA08
2961yne-m5_A_A15_U16NANNANT01.07 OP09
2971yne-m6_A_A15_U16NANNANT01.88 BB15
2981yne-m7_A_A15_U16B-ABA17370.31 BA17
2991yne-m8_A_A15_U16NANNANT01.52 OP18
3001yne-m9_A_A15_U16B-ABA01360.24 BA01
3011yne-m10_A_U16_U17NANNANT01.33 BB03
3021yne-m11_A_U16_U17NANNANT01.51 OP24
3031yne-m12_A_U16_U17NANNANT02.02 BB11
3041yne-m13_A_U16_U17NANNANT01.70 OP18
3051yne-m14_A_U16_U17NANNANT01.18 AB02
3061yne-m15_A_U16_U17NANNANT00.96 OP24
3071yne-m16_A_U16_U17NANNANT01.55 IC05
3081yne-m17_A_U16_U17NANNANT00.86 AB02
3091yne-m18_A_U16_U17NANNANT00.87 OP09
3101yne-m19_A_U16_U17NANNANT02.05 OP22
3111yne-m1_A_U16_U17NANNANT00.60 OP22
3121yne-m20_A_U16_U17NANNANT01.18 OP24
3131yne-m2_A_U16_U17NANNANT01.22 OP09
3141yne-m3_A_U16_U17NANNANT01.10 OP24
3151yne-m4_A_U16_U17NANNANT01.49 OP24
3161yne-m5_A_U16_U17NANNANT01.19 OP09
3171yne-m6_A_U16_U17NANNANT01.75 OP18
3181yne-m7_A_U16_U17NANNANT01.38 OP24
3191yne-m8_A_U16_U17NANNANT01.84 OP18
3201yne-m9_A_U16_U17NANNANT00.73 OP09
3211yne-m10_A_U17_U18NANNANT02.58 OP01
3221yne-m11_A_U17_U18NANNANT00.99 BB03
3231yne-m12_A_U17_U18NANNANT01.19 OP19
3241yne-m13_A_U17_U18NANNANT00.89 BA10
3251yne-m14_A_U17_U18NANNANT01.28 OP24
3261yne-m15_A_U17_U18NANNANT01.48 OP24
3271yne-m16_A_U17_U18NANNANT02.01 OP17
3281yne-m17_A_U17_U18NANNANT01.23 OP24
3291yne-m18_A_U17_U18NANNANT00.94 BB03
3301yne-m19_A_U17_U18NANNANT01.89 OP17
3311yne-m1_A_U17_U18NANNANT01.90 OP27
3321yne-m20_A_U17_U18NANNANT01.08 BB03
3331yne-m2_A_U17_U18NANNANT01.52 BA13
3341yne-m3_A_U17_U18NANNANT01.29 BA10
3351yne-m4_A_U17_U18NANNANT01.03 AA01
3361yne-m5_A_U17_U18NANNANT01.07 BB11
3371yne-m6_A_U17_U18NANNANT02.17 OP19
3381yne-m7_A_U17_U18NANNANT00.82 AA01
3391yne-m8_A_U17_U18NANNANT01.05 BA13
3401yne-m9_A_U17_U18NANNANT01.06 OP05
3411yne-m10_A_U18_G19NANNANT01.13 AA01
3421yne-m11_A_U18_G19NANNANT00.39 AA01
3431yne-m12_A_U18_G19NANNANT00.59 BB03
3441yne-m13_A_U18_G19NANNANT01.47 OP01
3451yne-m14_A_U18_G19NANNANT00.54 AA01
3461yne-m15_A_U18_G19NANNANT00.61 AA01
3471yne-m16_A_U18_G19NANNANT00.99 OP15
3481yne-m17_A_U18_G19NANNANT00.57 AA01
3491yne-m18_A_U18_G19NANNANT01.39 OP01
3501yne-m19_A_U18_G19NANNANT01.17 AA01
3511yne-m1_A_U18_G19NANNANT00.96 OP12
3521yne-m20_A_U18_G19NANNANT00.40 AA02
3531yne-m2_A_U18_G19NANNANT00.55 AA02
3541yne-m3_A_U18_G19AAwAA01300.31 AA01
3551yne-m4_A_U18_G19AAwAA0160.33 AA01
3561yne-m5_A_U18_G19NANNANT01.62 BA13
3571yne-m6_A_U18_G19NANNANT01.99 BA09
3581yne-m7_A_U18_G19NANNANT00.35 AA06
3591yne-m8_A_U18_G19NANNANT01.81 OP25
3601yne-m9_A_U18_G19NANNANT01.10 AA01
3611yne-m10_A_G19_A20NANNANT00.87 AA11
3621yne-m11_A_G19_A20AAwAA01770.31 AA01
3631yne-m12_A_G19_A20NANNANT00.55 AA01
3641yne-m13_A_G19_A20NANNANT00.78 AB02
3651yne-m14_A_G19_A20AAAAA00620.16 AA00
3661yne-m15_A_G19_A20NANNANT00.86 AB02
3671yne-m16_A_G19_A20AAuAA12310.48 AA12
3681yne-m17_A_G19_A20AAAAA00380.24 AA00
3691yne-m18_A_G19_A20NANNANT00.79 AA04
3701yne-m19_A_G19_A20NANNANT00.87 AA11
3711yne-m1_A_G19_A20NANNANT01.58 AB02
3721yne-m20_A_G19_A20NANNANT01.54 OP24
3731yne-m2_A_G19_A20NANNANT01.47 OP24
3741yne-m3_A_G19_A20AAAAA00180.42 AA00
3751yne-m4_A_G19_A20AAAAA00620.25 AA00
3761yne-m5_A_G19_A20AAAAA00420.32 AA00
3771yne-m6_A_G19_A20AAAAA00540.35 AA00
3781yne-m7_A_G19_A20AAwAA01850.27 AA01
3791yne-m8_A_G19_A20NANNANT01.46 OP24
3801yne-m9_A_G19_A20AAuAA12340.67 AA12
3811yne-m10_A_A20_U21NANNANT00.48 AA01
3821yne-m11_A_A20_U21NANNANT01.43 OP24
3831yne-m12_A_A20_U21AAAAA00720.16 AA00
3841yne-m13_A_A20_U21AAAAA00760.18 AA00
3851yne-m14_A_A20_U21NANNANT01.32 OP24
3861yne-m15_A_A20_U21AAAAA00670.15 AA00
3871yne-m16_A_A20_U21NANNANT00.72 AB02
3881yne-m17_A_A20_U21AAAAA00800.20 AA00
3891yne-m18_A_A20_U21AAAAA00760.16 AA00
3901yne-m19_A_A20_U21AAAAA00790.21 AA00
3911yne-m1_A_A20_U21NANNANT01.31 OP24
3921yne-m20_A_A20_U21AAAAA00750.26 AA00
3931yne-m2_A_A20_U21AAAAA00760.18 AA00
3941yne-m3_A_A20_U21NANNANT01.33 OP24
3951yne-m4_A_A20_U21AAwAA01890.27 AA01
3961yne-m5_A_A20_U21AAwAA01740.29 AA01
3971yne-m6_A_A20_U21AAwAA01870.23 AA01
3981yne-m7_A_A20_U21AAAAA00680.26 AA00
3991yne-m8_A_A20_U21AAAAA00690.23 AA00
4001yne-m9_A_A20_U21AAAAA00720.19 AA00
4011yne-m10_A_U21_C22AAAAA00680.17 AA00
4021yne-m11_A_U21_C22AAAAA00510.20 AA00
4031yne-m12_A_U21_C22NANNANT01.32 OP24
4041yne-m13_A_U21_C22AAAAA00810.20 AA00
4051yne-m14_A_U21_C22AAAAA00820.21 AA00
4061yne-m15_A_U21_C22NANNANT01.34 OP24
4071yne-m16_A_U21_C22AAwAA01770.24 AA01
4081yne-m17_A_U21_C22AAAAA00850.16 AA00
4091yne-m18_A_U21_C22AAAAA00780.17 AA00
4101yne-m19_A_U21_C22AAwAA01830.19 AA01
4111yne-m1_A_U21_C22AAAAA00700.23 AA00
4121yne-m20_A_U21_C22AAwAA01720.22 AA01
4131yne-m2_A_U21_C22AAAAA00860.15 AA00
4141yne-m3_A_U21_C22AAAAA00800.20 AA00
4151yne-m4_A_U21_C22NANNANT01.39 OP24
4161yne-m5_A_U21_C22NANNANT00.65 AA01
4171yne-m6_A_U21_C22AAAAA00750.23 AA00
4181yne-m7_A_U21_C22AAAAA00690.19 AA00
4191yne-m8_A_U21_C22NANNANT01.33 OP24
4201yne-m9_A_U21_C22AAAAA00710.22 AA00
4211yne-m10_A_C22_A23NANNANT01.29 OP24
4221yne-m11_A_C22_A23NANNANT00.58 AB02
4231yne-m12_A_C22_A23AAwAA01740.33 AA01
4241yne-m13_A_C22_A23AAwAA01830.27 AA01
4251yne-m14_A_C22_A23NANNANT00.36 AA10
4261yne-m15_A_C22_A23AAwAA01850.26 AA01
4271yne-m16_A_C22_A23AAAAA00560.26 AA00
4281yne-m17_A_C22_A23AAwAA01750.32 AA01
4291yne-m18_A_C22_A23AAwAA01920.25 AA01
4301yne-m19_A_C22_A23AAAAA00400.34 AA00
4311yne-m1_A_C22_A23AAAAA00760.15 AA00
4321yne-m20_A_C22_A23NANNANT00.41 AA04
4331yne-m2_A_C22_A23AAwAA01810.29 AA01
4341yne-m3_A_C22_A23AAAAA00730.15 AA00
4351yne-m4_A_C22_A23NANNANT01.35 OP24
4361yne-m5_A_C22_A23NANNANT00.82 AB02
4371yne-m6_A_C22_A23AAAAA00780.12 AA00
4381yne-m7_A_C22_A23AAAAA00480.16 AA00
4391yne-m8_A_C22_A23AAwAA01750.26 AA01
4401yne-m9_A_C22_A23AAAAA00550.19 AA00
4411yne-m10_A_A23_G24NANNANT00.90 AA04
4421yne-m11_A_A23_G24AAAAA00650.21 AA00
4431yne-m12_A_A23_G24AAAAA08310.52 AA08
4441yne-m13_A_A23_G24NANNANT00.91 AA04
4451yne-m14_A_A23_G24NANNANT01.06 AA04
4461yne-m15_A_A23_G24NANNANT00.96 AA04
4471yne-m16_A_A23_G24NANNANT00.99 AB02
4481yne-m17_A_A23_G24NANNANT01.04 AB02
4491yne-m18_A_A23_G24NANNANT00.97 AA04
4501yne-m19_A_A23_G24NANNANT00.82 AB02
4511yne-m1_A_A23_G24NANNANT01.03 AA12
4521yne-m20_A_A23_G24NANNANT01.40 OP24
4531yne-m2_A_A23_G24NANNANT00.96 AA04
4541yne-m3_A_A23_G24AAAAA04490.47 AA04
4551yne-m4_A_A23_G24AAAAA04300.62 AA04
4561yne-m5_A_A23_G24NANNANT00.66 AA04
4571yne-m6_A_A23_G24AAAAA00130.35 AA00
4581yne-m7_A_A23_G24NANNANT00.56 AB02
4591yne-m8_A_A23_G24NANNANT00.81 AA04
4601yne-m9_A_A23_G24NANNANT00.84 AA04
4611yne-m10_A_G24_U25NANNANT01.22 OP09
4621yne-m11_A_G24_U25NANNANT01.82 IC04
4631yne-m12_A_G24_U25NANNANT01.53 IC04
4641yne-m13_A_G24_U25NANNANT02.32 OP29
4651yne-m14_A_G24_U25NANNANT02.04 BB11
4661yne-m15_A_G24_U25NANNANT01.24 OP09
4671yne-m16_A_G24_U25NANNANT00.92 AA12
4681yne-m17_A_G24_U25NANNANT01.39 AA01
4691yne-m18_A_G24_U25NANNANT01.99 OP24
4701yne-m19_A_G24_U25NANNANT01.22 OP24
4711yne-m1_A_G24_U25NANNANT01.18 OP26
4721yne-m20_A_G24_U25NANNANT01.44 AA01
4731yne-m2_A_G24_U25NANNANT00.52 ZZ02
4741yne-m3_A_G24_U25NANNANT01.65 IC04
4751yne-m4_A_G24_U25NANNANT00.74 AA12
4761yne-m5_A_G24_U25NANNANT01.24 OP19
4771yne-m6_A_G24_U25NANNANT01.24 AA01
4781yne-m7_A_G24_U25NANNANT00.84 AA01
4791yne-m8_A_G24_U25NANNANT00.80 AA12
4801yne-m9_A_G24_U25NANNANT01.20 OP09
4811yne-m10_A_U25_A26NANNANT01.46 BA10
4821yne-m11_A_U25_A26NANNANT00.65 OP12
4831yne-m12_A_U25_A26NANNANT01.19 BA10
4841yne-m13_A_U25_A26NANNANT01.04 AA04
4851yne-m14_A_U25_A26NANNANT01.29 BA10
4861yne-m15_A_U25_A26NANNANT00.61 OP12
4871yne-m16_A_U25_A26NANNANT00.75 AA05
4881yne-m17_A_U25_A26NANNANT00.43 AA02
4891yne-m18_A_U25_A26NANNANT01.02 AA04
4901yne-m19_A_U25_A26AAwAA01410.32 AA01
4911yne-m1_A_U25_A26NANNANT00.55 AA00
4921yne-m20_A_U25_A26NANNANT00.49 AA02
4931yne-m2_A_U25_A26NANNANT00.95 BA10
4941yne-m3_A_U25_A26NANNANT01.22 BA10
4951yne-m4_A_U25_A26AAwAA01350.31 AA01
4961yne-m5_A_U25_A26NANNANT01.22 BA10
4971yne-m6_A_U25_A26AAwAA05200.44 AA05
4981yne-m7_A_U25_A26NANNANT00.92 AA01
4991yne-m8_A_U25_A26AAwAA01320.33 AA01
5001yne-m9_A_U25_A26NANNANT01.28 BA10
5011yne-m10_A_A26_U27AAAAA00580.29 AA00
5021yne-m11_A_A26_U27AAAAA00880.12 AA00
5031yne-m12_A_A26_U27AAAAA00810.18 AA00
5041yne-m13_A_A26_U27AAAAA00910.17 AA00
5051yne-m14_A_A26_U27AAAAA00670.27 AA00
5061yne-m15_A_A26_U27AAAAA00890.18 AA00
5071yne-m16_A_A26_U27AAAAA00810.18 AA00
5081yne-m17_A_A26_U27AAAAA00930.14 AA00
5091yne-m18_A_A26_U27AAAAA00890.19 AA00
5101yne-m19_A_A26_U27AAAAA00700.25 AA00
5111yne-m1_A_A26_U27AAAAA00840.19 AA00
5121yne-m20_A_A26_U27AAAAA00910.15 AA00
5131yne-m2_A_A26_U27AAAAA00850.19 AA00
5141yne-m3_A_A26_U27AAAAA00790.19 AA00
5151yne-m4_A_A26_U27AAAAA00780.22 AA00
5161yne-m5_A_A26_U27AAAAA00850.17 AA00
5171yne-m6_A_A26_U27AAAAA00580.31 AA00
5181yne-m7_A_A26_U27AAAAA00910.14 AA00
5191yne-m8_A_A26_U27AAAAA00780.22 AA00
5201yne-m9_A_A26_U27AAAAA00720.22 AA00
5211yne-m10_A_U27_A28AAAAA00870.12 AA00
5221yne-m11_A_U27_A28AAAAA00820.14 AA00
5231yne-m12_A_U27_A28AAAAA00950.11 AA00
5241yne-m13_A_U27_A28AAAAA00940.11 AA00
5251yne-m14_A_U27_A28AAAAA00960.11 AA00
5261yne-m15_A_U27_A28AAAAA00930.12 AA00
5271yne-m16_A_U27_A28AAAAA00930.13 AA00
5281yne-m17_A_U27_A28AAAAA00930.13 AA00
5291yne-m18_A_U27_A28AAAAA00960.12 AA00
5301yne-m19_A_U27_A28AAAAA00940.13 AA00
5311yne-m1_A_U27_A28AAAAA00910.12 AA00
5321yne-m20_A_U27_A28AAAAA00920.12 AA00
5331yne-m2_A_U27_A28AAAAA00880.13 AA00
5341yne-m3_A_U27_A28AAAAA00920.15 AA00
5351yne-m4_A_U27_A28AAAAA00940.12 AA00
5361yne-m5_A_U27_A28AAAAA00920.12 AA00
5371yne-m6_A_U27_A28AAAAA00900.12 AA00
5381yne-m7_A_U27_A28AAAAA00940.13 AA00
5391yne-m8_A_U27_A28AAAAA00920.11 AA00
5401yne-m9_A_U27_A28AAAAA00920.13 AA00
5411yne-m10_A_A28_U29AAAAA00880.15 AA00
5421yne-m11_A_A28_U29AAAAA00890.17 AA00
5431yne-m12_A_A28_U29AAAAA00950.13 AA00
5441yne-m13_A_A28_U29AAAAA00930.14 AA00
5451yne-m14_A_A28_U29AAAAA00910.15 AA00
5461yne-m15_A_A28_U29AAAAA00940.14 AA00
5471yne-m16_A_A28_U29AAAAA00920.15 AA00
5481yne-m17_A_A28_U29AAAAA00930.14 AA00
5491yne-m18_A_A28_U29AAAAA00930.14 AA00
5501yne-m19_A_A28_U29AAAAA00910.15 AA00
5511yne-m1_A_A28_U29AAAAA00900.15 AA00
5521yne-m20_A_A28_U29AAAAA00910.14 AA00
5531yne-m2_A_A28_U29AAAAA00910.15 AA00
5541yne-m3_A_A28_U29AAAAA00940.14 AA00
5551yne-m4_A_A28_U29AAAAA00930.15 AA00
5561yne-m5_A_A28_U29AAAAA00930.14 AA00
5571yne-m6_A_A28_U29AAAAA00920.15 AA00
5581yne-m7_A_A28_U29AAAAA00940.15 AA00
5591yne-m8_A_A28_U29AAAAA00920.14 AA00
5601yne-m9_A_A28_U29AAAAA00900.17 AA00
5611yne-m10_A_U29_C30AAAAA00870.21 AA00
5621yne-m11_A_U29_C30AAAAA00900.17 AA00
5631yne-m12_A_U29_C30AAAAA00940.14 AA00
5641yne-m13_A_U29_C30AAAAA00900.18 AA00
5651yne-m14_A_U29_C30AAAAA00910.18 AA00
5661yne-m15_A_U29_C30AAAAA00910.17 AA00
5671yne-m16_A_U29_C30AAAAA00900.19 AA00
5681yne-m17_A_U29_C30AAAAA00920.17 AA00
5691yne-m18_A_U29_C30AAAAA00900.19 AA00
5701yne-m19_A_U29_C30AAAAA00900.18 AA00
5711yne-m1_A_U29_C30AAAAA00920.15 AA00
5721yne-m20_A_U29_C30AAAAA00890.18 AA00
5731yne-m2_A_U29_C30AAAAA00890.20 AA00
5741yne-m3_A_U29_C30AAAAA00940.15 AA00
5751yne-m4_A_U29_C30AAAAA00920.16 AA00
5761yne-m5_A_U29_C30AAAAA00910.16 AA00
5771yne-m6_A_U29_C30AAAAA00910.18 AA00
5781yne-m7_A_U29_C30AAAAA00950.14 AA00
5791yne-m8_A_U29_C30AAAAA00910.16 AA00
5801yne-m9_A_U29_C30AAAAA00900.17 AA00
5811yne-m10_A_C30_C31AAAAA00850.20 AA00
5821yne-m11_A_C30_C31AAAAA00890.18 AA00
5831yne-m12_A_C30_C31AAAAA00920.15 AA00
5841yne-m13_A_C30_C31AAAAA00900.17 AA00
5851yne-m14_A_C30_C31AAAAA00920.15 AA00
5861yne-m15_A_C30_C31AAAAA00920.18 AA00
5871yne-m16_A_C30_C31AAAAA00880.17 AA00
5881yne-m17_A_C30_C31AAAAA00950.12 AA00
5891yne-m18_A_C30_C31AAAAA00910.15 AA00
5901yne-m19_A_C30_C31AAAAA00860.18 AA00
5911yne-m1_A_C30_C31AAAAA00930.16 AA00
5921yne-m20_A_C30_C31AAAAA00870.19 AA00
5931yne-m2_A_C30_C31AAAAA00870.20 AA00
5941yne-m3_A_C30_C31AAAAA00950.15 AA00
5951yne-m4_A_C30_C31AAAAA00940.15 AA00
5961yne-m5_A_C30_C31AAAAA00920.15 AA00
5971yne-m6_A_C30_C31AAAAA00920.17 AA00
5981yne-m7_A_C30_C31AAAAA00960.11 AA00
5991yne-m8_A_C30_C31AAAAA00910.17 AA00
6001yne-m9_A_C30_C31AAAAA00880.19 AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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