DNATCO v4.1: results

Co-evolution of protein and RNA structures within a highly conserved ribosomal domain

Results of the assignment of 114 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1y39_C_GTP101_C102	AAA	AA04	35	0.33	AA04
002	1y39_C_C102_C103	AAA	AA00	25	0.24	AA00
003	1y39_C_C103_A104	AAA	AA08	79	0.25	AA08
004	1y39_C_A104_G105	AAw	AA06	90	0.12	AA06
005	1y39_C_G105_G106	AAA	AA08	65	0.44	AA08
006	1y39_C_G106_A107	NAN	NANT	0	2.48	OP18
007	1y39_C_A107_U108	AAA	AA08	29	0.31	AA08
008	1y39_C_U108_G109	AAu	AA12	80	0.23	AA12
009	1y39_C_G109_U110	ZZZ	ZZ01	71	0.26	ZZ01
010	1y39_C_U110_A111	OPN	OP18	83	0.26	OP18
011	1y39_C_A111_U112	OPN	OP13	34	0.40	OP13
012	1y39_C_U112_G113	AAA	AA00	62	0.30	AA00
013	1y39_C_G113_C114	AAA	AA00	82	0.34	AA00
014	1y39_C_C114_U115	AAA	AA00	35	0.46	AA00
015	1y39_C_U115_U116	AAA	AA00	61	0.37	AA00
016	1y39_C_U116_A117	OPN	OP04	68	0.25	OP04
017	1y39_C_A117_G118	AAA	AA00	31	0.40	AA00
018	1y39_C_G118_A119	NAN	NANT	0	0.52	AB04
019	1y39_C_A119_A120	NAN	NANT	0	0.81	OP19
020	1y39_C_A120_G121	NAN	NANT	0	1.20	OP05
021	1y39_C_G121_C122	AAA	AA00	62	0.31	AA00
022	1y39_C_C122_A123	NAN	NANT	0	0.32	OP30
023	1y39_C_A123_G124	AAA	AA00	39	0.41	AA00
024	1y39_C_G124_C125	AAA	AA00	53	0.27	AA00
025	1y39_C_C125_A126	AAA	AA00	96	0.13	AA00
026	1y39_C_A126_A127	AAw	AA01	85	0.17	AA01
027	1y39_C_A127_U128	AAA	AA08	62	0.37	AA08
028	1y39_C_U128_C129	NAN	NANT	0	1.52	OP24
029	1y39_C_C129_A130	AAA	AA08	89	0.23	AA08
030	1y39_C_A130_U131	AAA	AA08	55	0.36	AA08
031	1y39_C_U131_U132	AAA	AA00	83	0.27	AA00
032	1y39_C_U132_U133	AAw	AA01	27	0.34	AA01
033	1y39_C_U133_A134	OPN	OP04	59	0.18	OP04
034	1y39_C_A134_A135	AAA	AA08	61	0.20	AA08
035	1y39_C_A135_A136	NAN	NANT	0	0.43	AB2S
036	1y39_C_A136_G137	NAN	NANT	0	0.58	OP28
037	1y39_C_G137_A138	NAN	NANT	0	0.86	OP17
038	1y39_C_A138_G139	NAN	NANT	0	1.11	OP22
039	1y39_C_G139_U140	NAN	NANT	0	0.72	OP26
040	1y39_C_U140_G141	AAw	AA06	87	0.13	AA06
041	1y39_C_G141_C142	AAA	AA08	81	0.17	AA08
042	1y39_C_C142_G143	AAA	AA00	19	0.52	AA00
043	1y39_C_G143_U144	AAA	AA00	42	0.35	AA00
044	1y39_C_U144_A145	OPN	OP04	86	0.15	OP04
045	1y39_C_A145_A146	AAA	AA00	61	0.35	AA00
046	1y39_C_A146_U147	AAw	AA10	72	0.31	AA10
047	1y39_C_U147_A148	NAN	NANT	0	0.88	AA00
048	1y39_C_A148_G149	AAA	AA00	10	0.60	AA00
049	1y39_C_G149_C150	AAA	AA00	60	0.19	AA00
050	1y39_C_C150_U151	AAA	AA00	67	0.42	AA00
051	1y39_C_U151_C152	AAA	AA00	76	0.21	AA00
052	1y39_C_C152_A153	AAA	AA00	78	0.21	AA00
053	1y39_C_A153_C154	AAA	AA08	36	0.51	AA08
054	1y39_C_C154_U155	AAA	AA00	70	0.23	AA00
055	1y39_C_U155_G156	AAA	AA00	90	0.10	AA00
056	1y39_C_G156_G157	AAA	AA00	77	0.19	AA00
057	1y39_C_G157_U158	AAA	AA00	81	0.15	AA00
058	1y39_D_GTP301_C302	AAA	AA00	54	0.31	AA00
059	1y39_D_C302_C303	AAA	AA00	88	0.13	AA00
060	1y39_D_C303_A304	AAA	AA00	82	0.20	AA00
061	1y39_D_A304_G305	AAw	AA01	68	0.17	AA01
062	1y39_D_G305_G306	AAA	AA00	30	0.51	AA00
063	1y39_D_G306_A307	NAN	NANT	0	2.45	OP18
064	1y39_D_A307_U308	AAA	AA08	16	0.39	AA08
065	1y39_D_U308_G309	AAA	AA00	55	0.26	AA00
066	1y39_D_G309_U310	ZZZ	ZZ01	82	0.26	ZZ01
067	1y39_D_U310_A311	OPN	OP18	82	0.25	OP18
068	1y39_D_A311_U312	NAN	NANT	0	0.39	OP13
069	1y39_D_U312_G313	AAA	AA00	76	0.24	AA00
070	1y39_D_G313_C314	AAA	AA00	74	0.38	AA00
071	1y39_D_C314_U315	AAA	AA00	36	0.37	AA00
072	1y39_D_U315_U316	AAA	AA00	63	0.31	AA00
073	1y39_D_U316_A317	OPN	OP04	93	0.15	OP04
074	1y39_D_A317_G318	AAA	AA00	60	0.33	AA00
075	1y39_D_G318_A319	NAN	NANT	0	0.50	AB04
076	1y39_D_A319_A320	NAN	NANT	0	0.82	OP19
077	1y39_D_A320_G321	NAN	NANT	0	1.14	OP05
078	1y39_D_G321_C322	AAA	AA08	74	0.26	AA08
079	1y39_D_C322_A323	NAN	NANT	0	0.37	OP30
080	1y39_D_A323_G324	AAA	AA00	44	0.43	AA00
081	1y39_D_G324_C325	AAA	AA00	72	0.21	AA00
082	1y39_D_C325_A326	AAA	AA00	73	0.19	AA00
083	1y39_D_A326_A327	AAw	AA01	75	0.18	AA01
084	1y39_D_A327_U328	AAA	AA00	39	0.42	AA00
085	1y39_D_U328_C329	NAN	NANT	0	1.49	OP24
086	1y39_D_C329_A330	AAA	AA08	83	0.28	AA08
087	1y39_D_A330_U331	AAA	AA08	77	0.33	AA08
088	1y39_D_U331_U332	AAA	AA00	56	0.25	AA00
089	1y39_D_U332_U333	AAw	AA01	62	0.21	AA01
090	1y39_D_U333_A334	NAN	NANT	0	0.29	OP04
091	1y39_D_A334_A335	AAA	AA00	80	0.19	AA00
092	1y39_D_A335_A336	NAN	NANT	0	0.40	AB2S
093	1y39_D_A336_G337	NAN	NANT	0	0.65	OP28
094	1y39_D_G337_A338	NAN	NANT	0	0.88	OP17
095	1y39_D_A338_G339	NAN	NANT	0	1.12	OP22
096	1y39_D_G339_U340	NAN	NANT	0	0.73	OP26
097	1y39_D_U340_G341	AAw	AA01	72	0.29	AA01
098	1y39_D_G341_C342	AAA	AA00	71	0.27	AA00
099	1y39_D_C342_G343	AAA	AA00	12	0.53	AA00
100	1y39_D_G343_U344	AAA	AA00	46	0.33	AA00
101	1y39_D_U344_A345	OPN	OP03	63	0.36	OP03
102	1y39_D_A345_A346	AAA	AA08	66	0.25	AA08
103	1y39_D_A346_U347	AAw	AA01	47	0.18	AA01
104	1y39_D_U347_A348	AAA	AA08	11	0.74	AA08
105	1y39_D_A348_G349	AAA	AA00	27	0.48	AA00
106	1y39_D_G349_C350	AAA	AA00	65	0.21	AA00
107	1y39_D_C350_U351	AAA	AA00	67	0.40	AA00
108	1y39_D_U351_C352	AAA	AA00	73	0.27	AA00
109	1y39_D_C352_A353	AAA	AA00	84	0.20	AA00
110	1y39_D_A353_C354	AAA	AA08	41	0.51	AA08
111	1y39_D_C354_U355	AAA	AA00	76	0.21	AA00
112	1y39_D_U355_G356	AAA	AA00	97	0.08	AA00
113	1y39_D_G356_G357	AAA	AA00	91	0.12	AA00
114	1y39_D_G357_U358	AAA	AA00	57	0.22	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 114 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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