DNATCO v4.1: results

Crystal Structure of human DNA polymerase lambda in complex with a one nucleotide DNA gap

Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1xsl_B_DC1_DG2	NAN	NANT	0	0.34	AB03
02	1xsl_B_DG2_DG3	BBB	BB00	82	0.16	BB00
03	1xsl_B_DG3_DC4	B-A	BA05	48	0.21	BA05
04	1xsl_B_DC4_DA5	NAN	NANT	0	1.39	OP21
05	1xsl_B_DA5_DG6	BBB	BB00	74	0.26	BB00
06	1xsl_B_DG6_DC7	B-A	BA08	72	0.26	BA08
07	1xsl_B_DC7_DG8	A-B	AB01	80	0.10	AB01
08	1xsl_B_DG8_DC9	B-A	BA08	50	0.35	BA08
09	1xsl_B_DC9_DA10	A-B	AB01	78	0.23	AB01
10	1xsl_B_DA10_DC11	BBB	BB00	69	0.20	BB00
11	1xsl_C_DG1_DT2	BBB	BB00	53	0.29	BB00
12	1xsl_C_DT2_DG3	BBB	BB00	88	0.12	BB00
13	1xsl_C_DG3_DC4	B-A	BA05	82	0.15	BA05
14	1xsl_C_DC4_DG5	A-B	AB01	43	0.28	AB01
15	1xsl_C_DG5_DC6	BBB	BB00	52	0.22	BB00
16	1xsl_D_DG1_DC2	A-B	AB01	28	0.38	AB01
17	1xsl_D_DC2_DC3	BBB	BB00	81	0.12	BB00
18	1xsl_D_DC3_DG4	BBB	BB00	81	0.27	BB00
19	1xsl_F_DC1_DG2	BBB	BB00	80	0.32	BB00
20	1xsl_F_DG2_DG3	BBB	BB00	83	0.21	BB00
21	1xsl_F_DG3_DC4	BBB	BB00	28	0.38	BB00
22	1xsl_F_DC4_DA5	NAN	NANT	0	1.36	OP21
23	1xsl_F_DA5_DG6	BBB	BB00	73	0.22	BB00
24	1xsl_F_DG6_DC7	BBB	BB00	72	0.34	BB00
25	1xsl_F_DC7_DG8	BBB	BB00	80	0.35	BB00
26	1xsl_F_DG8_DC9	BBB	BB00	73	0.23	BB00
27	1xsl_F_DC9_DA10	B12	BB04	74	0.29	BB04
28	1xsl_F_DA10_DC11	BBw	BB02	77	0.19	BB02
29	1xsl_G_DG1_DT2	BBw	BB16	66	0.57	BB16
30	1xsl_G_DT2_DG3	BBB	BB00	95	0.11	BB00
31	1xsl_G_DG3_DC4	BBB	BB00	73	0.19	BB00
32	1xsl_G_DC4_DG5	BBB	BB00	80	0.25	BB00
33	1xsl_G_DG5_DC6	BBB	BB00	73	0.26	BB00
34	1xsl_H_DG1_DC2	BBB	BB00	71	0.32	BB00
35	1xsl_H_DC2_DC3	BBB	BB00	94	0.09	BB00
36	1xsl_H_DC3_DG4	BBB	BB00	67	0.33	BB00
37	1xsl_J_DC1_DG2	BBB	BB00	72	0.36	BB00
38	1xsl_J_DG2_DG3	BBB	BB00	81	0.19	BB00
39	1xsl_J_DG3_DC4	BBB	BB00	39	0.35	BB00
40	1xsl_J_DC4_DA5	NAN	NANT	0	1.32	OP21
41	1xsl_J_DA5_DG6	BBB	BB00	81	0.21	BB00
42	1xsl_J_DG6_DC7	B12	BB04	15	0.29	BB04
43	1xsl_J_DC7_DG8	BBB	BB00	69	0.36	BB00
44	1xsl_J_DG8_DC9	BBB	BB00	77	0.21	BB00
45	1xsl_J_DC9_DA10	BBB	BB00	62	0.39	BB00
46	1xsl_J_DA10_DC11	BBw	BB02	81	0.11	BB02
47	1xsl_K_DG1_DT2	BBB	BB00	58	0.28	BB00
48	1xsl_K_DT2_DG3	BBB	BB00	95	0.11	BB00
49	1xsl_K_DG3_DC4	BBB	BB00	66	0.21	BB00
50	1xsl_K_DC4_DG5	BBB	BB00	73	0.27	BB00
51	1xsl_K_DG5_DC6	BBB	BB00	77	0.25	BB00
52	1xsl_L_DG1_DC2	BBB	BB00	58	0.34	BB00
53	1xsl_L_DC2_DC3	BBB	BB00	94	0.10	BB00
54	1xsl_L_DC3_DG4	BBB	BB00	67	0.31	BB00
55	1xsl_N_DC1_DG2	B12	BB04	92	0.21	BB04
56	1xsl_N_DG2_DG3	BBB	BB00	92	0.17	BB00
57	1xsl_N_DG3_DC4	BBB	BB00	28	0.36	BB00
58	1xsl_N_DC4_DA5	NAN	NANT	0	1.31	OP21
59	1xsl_N_DA5_DG6	BBB	BB00	73	0.25	BB00
60	1xsl_N_DG6_DC7	B12	BB04	25	0.27	BB04
61	1xsl_N_DC7_DG8	BBB	BB00	63	0.36	BB00
62	1xsl_N_DG8_DC9	BBB	BB00	64	0.23	BB00
63	1xsl_N_DC9_DA10	BBB	BB00	71	0.37	BB00
64	1xsl_N_DA10_DC11	BBB	BB00	86	0.22	BB00
65	1xsl_O_DG1_DT2	BBB	BB00	76	0.25	BB00
66	1xsl_O_DT2_DG3	BBB	BB00	95	0.11	BB00
67	1xsl_O_DG3_DC4	BBB	BB00	41	0.23	BB00
68	1xsl_O_DC4_DG5	BBB	BB00	61	0.24	BB00
69	1xsl_O_DG5_DC6	BBB	BB00	53	0.25	BB00
70	1xsl_P_DG1_DC2	BBw	BB16	56	0.64	BB16
71	1xsl_P_DC2_DC3	BBB	BB00	90	0.09	BB00
72	1xsl_P_DC3_DG4	BBB	BB00	55	0.37	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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