DNATCO v4.1: results

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1xpf_A_C1_U2	AAA	AA00	82	0.21	AA00
02	1xpf_A_U2_U3	AAA	AA00	87	0.20	AA00
03	1xpf_A_U3_G4	AAA	AA00	90	0.17	AA00
04	1xpf_A_G4_C5	AAA	AA00	68	0.16	AA00
05	1xpf_A_C5_U6	AAA	AA00	92	0.21	AA00
06	1xpf_A_U6_G7	A-B	AB05	84	0.25	AB05
07	1xpf_A_G7_A8	OPN	OP13	62	0.42	OP13
08	1xpf_A_A8_G9	A-B	AB05	77	0.24	AB05
09	1xpf_A_G9_G10	NAN	NANT	0	0.58	OP21
10	1xpf_A_G10_U11	AAA	AA00	70	0.19	AA00
11	1xpf_A_U11_G12	AAA	AA00	70	0.23	AA00
12	1xpf_A_G12_C13	AAA	AA00	81	0.14	AA00
13	1xpf_A_C13_A14	AAA	AA00	91	0.14	AA00
14	1xpf_A_A14_C15	AAA	AA00	80	0.20	AA00
15	1xpf_A_C15_A16	AAA	AA00	70	0.26	AA00
16	1xpf_A_A16_C17	AAA	AA00	87	0.21	AA00
17	1xpf_A_C17_A18	AAA	AA00	95	0.13	AA00
18	1xpf_A_A18_G19	AAA	AA00	88	0.16	AA00
19	1xpf_A_G19_C20	AAA	AA00	85	0.19	AA00
20	1xpf_A_C20_A21	AAw	AA01	77	0.22	AA01
21	1xpf_A_A21_A22	AAA	AA08	92	0.19	AA08
22	1xpf_A_A22_G23	AAA	AA00	88	0.22	AA00
23	1xpf_B_C1_U2	AAA	AA00	79	0.21	AA00
24	1xpf_B_U2_U3	AAA	AA00	91	0.17	AA00
25	1xpf_B_U3_G4	AAA	AA00	89	0.16	AA00
26	1xpf_B_G4_C5	AAA	AA00	96	0.12	AA00
27	1xpf_B_C5_U6	AAA	AA00	94	0.20	AA00
28	1xpf_B_U6_G7	A-B	AB05	84	0.25	AB05
29	1xpf_B_G7_A8	NAN	NANT	0	0.82	OP17
30	1xpf_B_A8_G9	SYN	AB2S	82	0.23	AB2S
31	1xpf_B_G9_G10	NAN	NANT	0	1.13	OP30
32	1xpf_B_G10_U11	AAA	AA00	81	0.19	AA00
33	1xpf_B_U11_G12	AAA	AA00	79	0.20	AA00
34	1xpf_B_G12_C13	AAA	AA00	84	0.15	AA00
35	1xpf_B_C13_A14	AAA	AA00	94	0.15	AA00
36	1xpf_B_A14_C15	AAA	AA00	80	0.16	AA00
37	1xpf_B_C15_A16	AAA	AA00	86	0.25	AA00
38	1xpf_B_A16_C17	AAA	AA00	84	0.20	AA00
39	1xpf_B_C17_A18	AAA	AA00	90	0.16	AA00
40	1xpf_B_A18_G19	AAA	AA00	86	0.16	AA00
41	1xpf_B_G19_C20	AAA	AA00	93	0.17	AA00
42	1xpf_B_C20_A21	AAA	AA00	89	0.15	AA00
43	1xpf_B_A21_A22	AAA	AA00	97	0.13	AA00
44	1xpf_B_A22_G23	AAA	AA00	89	0.21	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

group
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