DNATCO v4.1: results

Peptide trapped Holliday junction intermediate in Cre-loxP recombination

Results of the assignment of 67 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1xns_C_DT1_DA2	NAN	NANT	0	0.74	BB03
02	1xns_C_DA2_DT3	BBB	BB00	68	0.27	BB00
03	1xns_C_DT3_DA4	B12	BB04	69	0.29	BB04
04	1xns_C_DA4_DA5	BBB	BB00	22	0.43	BB00
05	1xns_C_DA5_DC6	NAN	NANT	0	0.44	BB05
06	1xns_C_DC6_DT7	A-B	AB01	22	0.43	AB01
07	1xns_C_DT7_DT8	BBB	BB00	61	0.22	BB00
08	1xns_C_DT8_DC9	BBB	BB00	30	0.32	BB00
09	1xns_C_DC9_DG10	BBB	BB00	26	0.42	BB00
10	1xns_C_DG10_DT11	A-B	AB03	49	0.23	AB03
11	1xns_C_DT11_DA12	BBB	BB01	55	0.13	BB01
12	1xns_C_DA12_DT13	BBB	BB01	56	0.17	BB01
13	1xns_C_DT13_DA14	NAN	NANT	0	0.45	BB00
14	1xns_C_DA14_DA15	BBB	BB00	23	0.29	BB00
15	1xns_C_DA15_DT16	B-A	BA08	26	0.61	BA08
16	1xns_C_DT16_DG17	NAN	NANT	0	0.48	BB10
17	1xns_C_DG17_DT18	NAN	NANT	0	0.66	AB02
18	1xns_C_DT18_DA19	NAN	NANT	0	1.73	OP19
19	1xns_C_DA19_DT20	NAN	NANT	0	0.75	BB03
20	1xns_C_DT20_DG21	NAN	NANT	0	0.66	BA17
21	1xns_C_DG21_DC22	NAN	NANT	0	0.47	BA08
22	1xns_C_DC22_DT23	BBB	BB00	16	0.27	BB00
23	1xns_C_DT23_DA24	B-A	BA08	59	0.28	BA08
24	1xns_C_DA24_DT25	A-B	AB01	36	0.34	AB01
25	1xns_C_DT25_DA26	NAN	NANT	0	0.46	BB02
26	1xns_C_DA26_DC27	BBB	BB00	18	0.35	BB00
27	1xns_C_DC27_DG28	BB2	BB07	19	0.23	BB07
28	1xns_C_DG28_DA29	BBB	BB00	32	0.22	BB00
29	1xns_C_DA29_DA30	B12	BB04	86	0.18	BB04
30	1xns_C_DA30_DG31	BBB	BB00	82	0.18	BB00
31	1xns_C_DG31_DT32	BBB	BB00	58	0.27	BB00
32	1xns_C_DT32_DT33	BBB	BB00	72	0.22	BB00
33	1xns_C_DT33_DA34	B-A	BA08	45	0.46	BA08
34	1xns_C_DA34_DT35	NAN	NANT	0	0.30	BB11
35	1xns_D_DA2_DT3	BBB	BB00	42	0.26	BB00
36	1xns_D_DT3_DA4	B12	BB04	51	0.29	BB04
37	1xns_D_DA4_DA5	BBB	BB00	64	0.38	BB00
38	1xns_D_DA5_DC6	NAN	NANT	0	0.42	BB05
39	1xns_D_DC6_DT7	NAN	NANT	0	0.53	BB16
40	1xns_D_DT7_DT8	BBB	BB00	42	0.19	BB00
41	1xns_D_DT8_DC9	B-A	BA05	58	0.23	BA05
42	1xns_D_DC9_DG10	NAN	NANT	0	0.43	AA02
43	1xns_D_DG10_DT11	BBB	BB01	56	0.33	BB01
44	1xns_D_DT11_DA12	BBB	BB00	78	0.25	BB00
45	1xns_D_DA12_DT13	NAN	NANT	0	0.61	BB08
46	1xns_D_DT13_DA14	NAN	NANT	0	0.33	BB04
47	1xns_D_DA14_DG15	NAN	NANT	0	0.40	BB10
48	1xns_D_DG15_DC16	NAN	NANT	0	0.60	AA01
49	1xns_D_DC16_DA17	NAN	NANT	0	0.55	AB03
50	1xns_D_DA17_DT18	miB	BB10	50	0.50	BB10
51	1xns_D_DT18_DA19	B-A	BA17	58	0.27	BA17
52	1xns_D_DA19_DC20	NAN	NANT	0	0.64	BB16
53	1xns_D_DC20_DA21	BBB	BB00	33	0.42	BB00
54	1xns_D_DA21_DT22	B-A	BA09	72	0.29	BA09
55	1xns_D_DT22_DT23	BBw	BB16	32	0.46	BB16
56	1xns_D_DT23_DA24	B-A	BA08	75	0.37	BA08
57	1xns_D_DA24_DT25	A-B	AB01	41	0.29	AB01
58	1xns_D_DT25_DA26	BBB	BB00	7	0.47	BB00
59	1xns_D_DA26_DC27	BBB	BB00	52	0.26	BB00
60	1xns_D_DC27_DG28	B12	BB04	34	0.22	BB04
61	1xns_D_DG28_DA29	BBB	BB00	90	0.13	BB00
62	1xns_D_DA29_DA30	BBB	BB00	70	0.25	BB00
63	1xns_D_DA30_DG31	BBB	BB00	37	0.27	BB00
64	1xns_D_DG31_DT32	BBB	BB00	25	0.49	BB00
65	1xns_D_DT32_DT33	BBw	BB17	37	0.30	BB17
66	1xns_D_DT33_DA34	NAN	NANT	0	0.56	BB08
67	1xns_D_DA34_DT35	miB	BB12	46	0.34	BB12

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 67 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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