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Conformers: ABBIImiBZICOPNSYNN
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Crystal structure of human POT1 bound to telomeric single-stranded DNA (TTAGGGTTAG)

Results of the assignment of 9 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
11xjv_B_DT1_DT2BBwBB03650.43 BB03
21xjv_B_DT2_DA3NANNANT00.74 IC06
31xjv_B_DA3_DG4BBBBB00840.19 BB00
41xjv_B_DG4_DG5NANNANT01.36 OP21
51xjv_B_DG5_DG6NANNANT00.94 BB2S
61xjv_B_DG6_DT7NANNANT01.67 IC04
71xjv_B_DT7_DT8NANNANT01.63 OP22
81xjv_B_DT8_DA9NANNANT01.08 BB00
91xjv_B_DA9_DG10NANNANT00.77 ZZ02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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