DNATCO v4.1: results

The crystal structure of Leucyl-tRNA synthetase and tRNA(leucine) complex

Results of the assignment of 174 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1wz2_C_G901_C902	AAA	AA00	7	0.49	AA00
002	1wz2_C_C902_G903	AAA	AA08	47	0.43	AA08
003	1wz2_C_G903_G904	AAA	AA00	31	0.31	AA00
004	1wz2_C_G904_G905	AAA	AA00	36	0.30	AA00
005	1wz2_C_G905_G906	AAw	AA01	10	0.43	AA01
006	1wz2_C_G906_G907	NAN	NANT	0	0.59	AA06
007	1wz2_C_G907_U908	NAN	NANT	0	1.23	OP01
008	1wz2_C_U908_U909	AAu	AA07	31	0.39	AA07
009	1wz2_C_U909_G910	NAN	NANT	0	1.53	OP04
010	1wz2_C_G910_C911	AAA	AA00	82	0.17	AA00
011	1wz2_C_C911_C912	AAA	AA00	60	0.17	AA00
012	1wz2_C_C912_G913	AAA	AA08	39	0.47	AA08
013	1wz2_C_G913_A914	NAN	NANT	0	0.64	AA10
014	1wz2_C_A914_G915	AAA	AA08	36	0.66	AA08
015	1wz2_C_G915_C916	NAN	NANT	0	0.88	AA10
016	1wz2_C_C916_C917	NAN	NANT	0	2.88	OP04
017	1wz2_C_C917_U918	NAN	NANT	0	0.42	ZZ01
018	1wz2_C_U918_G919	NAN	NANT	0	1.79	OP31
019	1wz2_C_G919_G920	NAN	NANT	0	1.05	AA10
020	1wz2_C_G920_U921	NAN	NANT	0	1.60	ZZ02
021	1wz2_C_U921_C922	NAN	NANT	0	1.17	OP05
022	1wz2_C_C922_A923	NAN	NANT	0	1.91	OP18
023	1wz2_C_A923_A924	NAN	NANT	0	1.54	AA01
024	1wz2_C_A924_A925	NAN	NANT	0	0.70	OP07
025	1wz2_C_A925_G926	AAA	AA00	10	0.56	AA00
026	1wz2_C_G926_G927	AAA	AA00	60	0.21	AA00
027	1wz2_C_G927_C928	AAA	AA00	89	0.18	AA00
028	1wz2_C_C928_G929	AAA	AA00	62	0.27	AA00
029	1wz2_C_G929_G930	AAA	AA08	79	0.21	AA08
030	1wz2_C_G930_G931	AAA	AA08	80	0.16	AA08
031	1wz2_C_G931_G932	AAA	AA00	68	0.24	AA00
032	1wz2_C_G932_G933	AAA	AA00	92	0.18	AA00
033	1wz2_C_G933_A934	AAA	AA00	58	0.25	AA00
034	1wz2_C_A934_C935	NAN	NANT	0	0.77	AA05
035	1wz2_C_C935_U936	NAN	NANT	0	1.00	AA05
036	1wz2_C_U936_C937	NAN	NANT	0	0.81	OP30
037	1wz2_C_C937_A938	AAA	AA00	18	0.47	AA00
038	1wz2_C_A938_A939	NAN	NANT	0	0.63	OP08
039	1wz2_C_A939_G940	NAN	NANT	0	0.33	AA05
040	1wz2_C_G940_A941	AAA	AA00	27	0.45	AA00
041	1wz2_C_A941_U942	AAA	AA00	94	0.12	AA00
042	1wz2_C_U942_C943	AAA	AA00	90	0.16	AA00
043	1wz2_C_C943_C944	AAA	AA00	80	0.14	AA00
044	1wz2_C_C944_C945	AAA	AA00	89	0.14	AA00
045	1wz2_C_C945_C946	AAA	AA00	75	0.22	AA00
046	1wz2_C_C946_U947	AAA	AA00	80	0.30	AA00
047	1wz2_C_U947_C948	NAN	NANT	0	0.42	OP30
048	1wz2_C_C948_C949	AAA	AA00	54	0.23	AA00
049	1wz2_C_C949_C950	AAA	AA00	90	0.18	AA00
050	1wz2_C_C950_G951	AAA	AA00	81	0.28	AA00
051	1wz2_C_G951_U952	NAN	NANT	0	1.76	OP11
052	1wz2_C_U952_A953	NAN	NANT	0	0.96	OP02
053	1wz2_C_A953_G954	NAN	NANT	0	1.09	OP26
054	1wz2_C_G954_G955	OPN	OP01	33	0.80	OP01
055	1wz2_C_G955_G956	AAA	AA00	91	0.13	AA00
056	1wz2_C_G956_G957	AAA	AA00	71	0.18	AA00
057	1wz2_C_G957_U958	NAN	NANT	0	0.33	AA04
058	1wz2_C_U958_U959	AAw	AA01	19	0.36	AA01
059	1wz2_C_U959_C960	NAN	NANT	0	0.64	AA12
060	1wz2_C_C960_C961	NAN	NANT	0	1.73	OP13
061	1wz2_C_C961_G962	AAA	AA00	24	0.35	AA00
062	1wz2_C_G962_G963	AAA	AA00	64	0.23	AA00
063	1wz2_C_G963_G964	AAw	AA01	82	0.24	AA01
064	1wz2_C_G964_G965	AAA	AA00	30	0.37	AA00
065	1wz2_C_G965_U966	AAA	AA08	87	0.26	AA08
066	1wz2_C_U966_U967	AAw	AA01	46	0.38	AA01
067	1wz2_C_U967_C968	NAN	NANT	0	0.34	OP04
068	1wz2_C_C968_G969	AAA	AA00	53	0.30	AA00
069	1wz2_C_G969_A970	NAN	NANT	0	0.46	IC01
070	1wz2_C_A970_A971	NAN	NANT	0	1.26	OP18
071	1wz2_C_A971_U972	NAN	NANT	0	0.49	AA05
072	1wz2_C_U972_C973	NAN	NANT	0	0.38	OP12
073	1wz2_C_C973_C974	AAA	AA00	38	0.29	AA00
074	1wz2_C_C974_C975	AAA	AA00	88	0.15	AA00
075	1wz2_C_C975_C976	AAA	AA00	88	0.16	AA00
076	1wz2_C_C976_G977	AAA	AA00	73	0.27	AA00
077	1wz2_C_G977_C978	AAA	AA00	82	0.13	AA00
078	1wz2_C_C978_C979	AAA	AA00	80	0.26	AA00
079	1wz2_C_C979_C980	AAA	AA00	69	0.17	AA00
080	1wz2_C_C980_C981	AAA	AA00	63	0.24	AA00
081	1wz2_C_C981_C982	AAA	AA00	71	0.24	AA00
082	1wz2_C_C982_G983	AAw	AA06	33	0.45	AA06
083	1wz2_C_G983_C984	AAA	AA08	11	0.45	AA08
084	1wz2_C_C984_A985	OPN	OP01	16	0.45	OP01
085	1wz2_C_A985_C986	AAu	AA07	28	0.56	AA07
086	1wz2_C_C986_C987	NAN	NANT	0	1.01	OP27
087	1wz2_C_C987_A988	NAN	NANT	0	0.83	AA11
088	1wz2_D_G901_C902	AAA	AA00	7	0.43	AA00
089	1wz2_D_C902_G903	NAN	NANT	0	0.93	AA11
090	1wz2_D_G903_G904	AAA	AA00	70	0.24	AA00
091	1wz2_D_G904_G905	NAN	NANT	0	0.56	AA03
092	1wz2_D_G905_G906	AAw	AA01	69	0.30	AA01
093	1wz2_D_G906_G907	AAw	AA01	15	0.41	AA01
094	1wz2_D_G907_U908	NAN	NANT	0	0.43	OP11
095	1wz2_D_U908_U909	NAN	NANT	0	0.43	AA07
096	1wz2_D_U909_G910	NAN	NANT	0	1.46	OP26
097	1wz2_D_G910_C911	AAA	AA00	85	0.15	AA00
098	1wz2_D_C911_C912	AAA	AA00	68	0.25	AA00
099	1wz2_D_C912_G913	AAw	AA05	66	0.31	AA05
100	1wz2_D_G913_A914	AAu	AA12	74	0.29	AA12
101	1wz2_D_A914_G915	AAA	AA00	27	0.55	AA00
102	1wz2_D_G915_C916	NAN	NANT	0	0.64	AA02
103	1wz2_D_C916_C917	NAN	NANT	0	0.42	OP12
104	1wz2_D_C917_U918	NAN	NANT	0	0.43	ZZ01
105	1wz2_D_U918_G919	NAN	NANT	0	1.33	OP17
106	1wz2_D_G919_G920	NAN	NANT	0	0.72	IC04
107	1wz2_D_G920_U921	NAN	NANT	0	0.52	OP12
108	1wz2_D_U921_C922	NAN	NANT	0	1.05	OP05
109	1wz2_D_C922_A923	NAN	NANT	0	1.85	OP18
110	1wz2_D_A923_A924	NAN	NANT	0	1.56	AA01
111	1wz2_D_A924_A925	NAN	NANT	0	0.80	OP07
112	1wz2_D_A925_G926	AAA	AA08	19	0.52	AA08
113	1wz2_D_G926_G927	AAA	AA00	66	0.23	AA00
114	1wz2_D_G927_C928	AAA	AA00	69	0.21	AA00
115	1wz2_D_C928_G929	AAA	AA00	46	0.37	AA00
116	1wz2_D_G929_G930	AAA	AA00	71	0.18	AA00
117	1wz2_D_G930_G931	AAA	AA08	82	0.25	AA08
118	1wz2_D_G931_G932	AAA	AA00	74	0.20	AA00
119	1wz2_D_G932_G933	AAA	AA00	88	0.17	AA00
120	1wz2_D_G933_A934	AAA	AA00	78	0.27	AA00
121	1wz2_D_A934_C935	NAN	NANT	0	0.98	AA05
122	1wz2_D_C935_U936	NAN	NANT	0	2.65	OP04
123	1wz2_D_U936_C937	NAN	NANT	0	1.26	OP11
124	1wz2_D_C937_A938	NAN	NANT	0	0.82	AA01
125	1wz2_D_A938_A939	NAN	NANT	0	0.43	IC07
126	1wz2_D_A939_G940	AAw	AA05	65	0.39	AA05
127	1wz2_D_G940_A941	AAA	AA08	85	0.19	AA08
128	1wz2_D_A941_U942	AAA	AA00	93	0.11	AA00
129	1wz2_D_U942_C943	AAA	AA00	85	0.21	AA00
130	1wz2_D_C943_C944	AAA	AA00	93	0.14	AA00
131	1wz2_D_C944_C945	AAA	AA00	75	0.15	AA00
132	1wz2_D_C945_C946	AAA	AA00	59	0.24	AA00
133	1wz2_D_C946_U947	AAA	AA00	65	0.28	AA00
134	1wz2_D_U947_C948	NAN	NANT	0	0.54	OP30
135	1wz2_D_C948_C949	AAA	AA08	89	0.11	AA08
136	1wz2_D_C949_C950	AAA	AA00	51	0.24	AA00
137	1wz2_D_C950_G951	AAw	AA01	61	0.21	AA01
138	1wz2_D_G951_U952	NAN	NANT	0	1.67	OP11
139	1wz2_D_U952_A953	NAN	NANT	0	0.93	OP06
140	1wz2_D_A953_G954	NAN	NANT	0	0.68	AA07
141	1wz2_D_G954_G955	NAN	NANT	0	0.80	OP01
142	1wz2_D_G955_G956	AAA	AA00	83	0.16	AA00
143	1wz2_D_G956_G957	AAA	AA00	93	0.14	AA00
144	1wz2_D_G957_U958	AAA	AA00	80	0.24	AA00
145	1wz2_D_U958_U959	AAw	AA10	43	0.37	AA10
146	1wz2_D_U959_C960	AAu	AA12	35	0.62	AA12
147	1wz2_D_C960_C961	NAN	NANT	0	1.88	OP13
148	1wz2_D_C961_G962	AAu	AA12	22	0.56	AA12
149	1wz2_D_G962_G963	AAA	AA00	83	0.26	AA00
150	1wz2_D_G963_G964	AAw	AA01	63	0.20	AA01
151	1wz2_D_G964_G965	AAA	AA00	72	0.16	AA00
152	1wz2_D_G965_U966	AAA	AA00	79	0.22	AA00
153	1wz2_D_U966_U967	AAA	AA00	15	0.39	AA00
154	1wz2_D_U967_C968	OPN	OP04	28	0.19	OP04
155	1wz2_D_C968_G969	AAA	AA00	55	0.41	AA00
156	1wz2_D_G969_A970	NAN	NANT	0	0.47	IC01
157	1wz2_D_A970_A971	NAN	NANT	0	1.27	OP18
158	1wz2_D_A971_U972	NAN	NANT	0	0.69	AA04
159	1wz2_D_U972_C973	NAN	NANT	0	0.32	OP12
160	1wz2_D_C973_C974	AAA	AA00	84	0.15	AA00
161	1wz2_D_C974_C975	AAA	AA00	70	0.22	AA00
162	1wz2_D_C975_C976	AAA	AA00	64	0.23	AA00
163	1wz2_D_C976_G977	AAA	AA00	47	0.34	AA00
164	1wz2_D_G977_C978	AAA	AA00	78	0.18	AA00
165	1wz2_D_C978_C979	AAA	AA00	80	0.25	AA00
166	1wz2_D_C979_C980	AAA	AA00	73	0.22	AA00
167	1wz2_D_C980_C981	AAA	AA00	77	0.23	AA00
168	1wz2_D_C981_C982	AAA	AA00	74	0.12	AA00
169	1wz2_D_C982_G983	AAw	AA01	37	0.38	AA01
170	1wz2_D_G983_C984	NAN	NANT	0	0.80	IC03
171	1wz2_D_C984_A985	NAN	NANT	0	0.86	OP06
172	1wz2_D_A985_C986	NAN	NANT	0	0.47	AA01
173	1wz2_D_C986_C987	NAN	NANT	0	2.13	OP29
174	1wz2_D_C987_A988	NAN	NANT	0	0.96	IC07

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 174 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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