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Conformers: ABBIImiBZICOPNSYNN
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NMR Structure Determined for MLV NC Complex with RNA Sequence UAUCUG

Results of the assignment of 100 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0011wwg-m10_B_U304_A305NANNANT02.02 OP05
0021wwg-m11_B_U304_A305NANNANT01.40 AB04
0031wwg-m12_B_U304_A305NANNANT01.13 IC04
0041wwg-m13_B_U304_A305NANNANT02.57 OP1S
0051wwg-m14_B_U304_A305NANNANT01.23 OP31
0061wwg-m15_B_U304_A305NANNANT00.88 OP13
0071wwg-m16_B_U304_A305NANNANT01.10 OP10
0081wwg-m17_B_U304_A305NANNANT00.78 OP06
0091wwg-m18_B_U304_A305NANNANT02.52 IC05
0101wwg-m19_B_U304_A305NANNANT01.44 OP29
0111wwg-m1_B_U304_A305NANNANT00.95 IC01
0121wwg-m20_B_U304_A305NANNANT01.45 IC03
0131wwg-m2_B_U304_A305NANNANT01.04 OP06
0141wwg-m3_B_U304_A305NANNANT01.60 OP17
0151wwg-m4_B_U304_A305NANNANT01.23 OP31
0161wwg-m5_B_U304_A305NANNANT01.01 OP06
0171wwg-m6_B_U304_A305NANNANT02.27 ZZ1S
0181wwg-m7_B_U304_A305NANNANT00.85 OP21
0191wwg-m8_B_U304_A305NANNANT01.49 OP16
0201wwg-m9_B_U304_A305NANNANT01.92 OP21
0211wwg-m10_B_A305_U306NANNANT01.40 ZZ01
0221wwg-m11_B_A305_U306NANNANT00.67 OP11
0231wwg-m12_B_A305_U306NANNANT01.44 OP01
0241wwg-m13_B_A305_U306NANNANT01.00 OP03
0251wwg-m14_B_A305_U306NANNANT00.77 ZZ02
0261wwg-m15_B_A305_U306NANNANT01.97 OPS1
0271wwg-m16_B_A305_U306NANNANT00.83 OP06
0281wwg-m17_B_A305_U306NANNANT01.56 OP01
0291wwg-m18_B_A305_U306NANNANT01.12 OP13
0301wwg-m19_B_A305_U306NANNANT00.94 OPS1
0311wwg-m1_B_A305_U306NANNANT01.28 OP25
0321wwg-m20_B_A305_U306NANNANT01.37 OP13
0331wwg-m2_B_A305_U306NANNANT01.89 ZZS1
0341wwg-m3_B_A305_U306NANNANT01.15 OP29
0351wwg-m4_B_A305_U306NANNANT00.77 ZZ02
0361wwg-m5_B_A305_U306NANNANT01.32 OP31
0371wwg-m6_B_A305_U306NANNANT01.15 OPS1
0381wwg-m7_B_A305_U306NANNANT00.71 ZZ02
0391wwg-m8_B_A305_U306NANNANT00.92 OP01
0401wwg-m9_B_A305_U306NANNANT01.42 OP25
0411wwg-m10_B_U306_C307NANNANT00.72 OP16
0421wwg-m11_B_U306_C307NANNANT01.37 OP11
0431wwg-m12_B_U306_C307NANNANT01.24 OP12
0441wwg-m13_B_U306_C307NANNANT01.42 OP11
0451wwg-m14_B_U306_C307NANNANT01.33 OP12
0461wwg-m15_B_U306_C307NANNANT01.50 OP11
0471wwg-m16_B_U306_C307NANNANT01.88 OP26
0481wwg-m17_B_U306_C307NANNANT01.38 OP16
0491wwg-m18_B_U306_C307NANNANT01.51 OP11
0501wwg-m19_B_U306_C307NANNANT01.42 AA13
0511wwg-m1_B_U306_C307NANNANT01.20 OP12
0521wwg-m20_B_U306_C307NANNANT01.29 OP12
0531wwg-m2_B_U306_C307NANNANT00.85 OP16
0541wwg-m3_B_U306_C307NANNANT01.20 OP12
0551wwg-m4_B_U306_C307NANNANT01.33 OP12
0561wwg-m5_B_U306_C307NANNANT01.32 OP16
0571wwg-m6_B_U306_C307NANNANT01.28 OP12
0581wwg-m7_B_U306_C307NANNANT01.31 OP12
0591wwg-m8_B_U306_C307NANNANT01.32 OP16
0601wwg-m9_B_U306_C307NANNANT01.29 OP16
0611wwg-m10_B_C307_U308NANNANT01.31 OP09
0621wwg-m11_B_C307_U308NANNANT01.53 OP31
0631wwg-m12_B_C307_U308NANNANT01.22 OP30
0641wwg-m13_B_C307_U308NANNANT01.39 OP09
0651wwg-m14_B_C307_U308NANNANT01.28 OP09
0661wwg-m15_B_C307_U308NANNANT01.18 OP09
0671wwg-m16_B_C307_U308NANNANT01.10 OP01
0681wwg-m17_B_C307_U308NANNANT01.03 OP01
0691wwg-m18_B_C307_U308NANNANT01.16 OP09
0701wwg-m19_B_C307_U308NANNANT01.29 OP30
0711wwg-m1_B_C307_U308NANNANT01.03 OP01
0721wwg-m20_B_C307_U308NANNANT01.07 OP01
0731wwg-m2_B_C307_U308NANNANT01.34 OP30
0741wwg-m3_B_C307_U308NANNANT02.30 BA16
0751wwg-m4_B_C307_U308NANNANT01.28 OP09
0761wwg-m5_B_C307_U308NANNANT00.99 OP01
0771wwg-m6_B_C307_U308NANNANT01.56 OP31
0781wwg-m7_B_C307_U308NANNANT01.26 OP09
0791wwg-m8_B_C307_U308NANNANT01.10 OP01
0801wwg-m9_B_C307_U308NANNANT01.10 OP01
0811wwg-m10_B_U308_G309NANNANT00.56 OP12
0821wwg-m11_B_U308_G309NANNANT01.15 IC05
0831wwg-m12_B_U308_G309NANNANT01.32 AA07
0841wwg-m13_B_U308_G309NANNANT00.63 OP12
0851wwg-m14_B_U308_G309NANNANT00.60 OP12
0861wwg-m15_B_U308_G309NANNANT01.42 AA07
0871wwg-m16_B_U308_G309NANNANT00.60 OP12
0881wwg-m17_B_U308_G309NANNANT00.60 OP12
0891wwg-m18_B_U308_G309NANNANT01.30 AA07
0901wwg-m19_B_U308_G309NANNANT00.87 IC02
0911wwg-m1_B_U308_G309NANNANT00.64 OP12
0921wwg-m20_B_U308_G309NANNANT00.58 OP12
0931wwg-m2_B_U308_G309NANNANT00.60 OP12
0941wwg-m3_B_U308_G309NANNANT01.57 ZZ02
0951wwg-m4_B_U308_G309NANNANT00.60 OP12
0961wwg-m5_B_U308_G309NANNANT00.58 OP12
0971wwg-m6_B_U308_G309NANNANT01.13 IC05
0981wwg-m7_B_U308_G309NANNANT00.59 OP12
0991wwg-m8_B_U308_G309NANNANT01.39 AB04
1001wwg-m9_B_U308_G309NANNANT00.57 OP12

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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