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Conformers: ABBIImiBZICOPNSYNN
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Hyperthermophile chromosomal protein SAC7D double mutant V26F/M29F in complex with DNA GCGATCGC

Results of the assignment of 14 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011wto_B_DG101_DC102NANNANT00.54 BA10
021wto_B_DC102_DG103NANNANT00.39 AB04
031wto_B_DG103_DA104BBwBB02150.40 BB02
041wto_B_DA104_DT105BBBBB01700.31 BB01
051wto_B_DT105_DC106BBBBB00760.31 BB00
061wto_B_DC106_DG107BB2BB07660.31 BB07
071wto_B_DG107_DC108B-ABA05740.24 BA05
081wto_C_DG109_DC110BBBBB00820.21 BB00
091wto_C_DC110_DG111BBBBB00740.23 BB00
101wto_C_DG111_DA112B12BB04690.23 BB04
111wto_C_DA112_DT113BBBBB01780.16 BB01
121wto_C_DT113_DC114NANNANT00.64 BA10
131wto_C_DC114_DG115NANNANT00.34 AB04
141wto_C_DG115_DC116B-ABA01340.26 BA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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