DNATCO v4.1: results

THREE-DIMENSIONAL STRUCTURE OF YEAST T-RNA-ASP. I. STRUCTURE DETERMINATION

Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1vtq_A_U1_C2	NAN	NANT	0	0.31	AA04
02	1vtq_A_C2_C3	AAA	AA04	39	0.53	AA04
03	1vtq_A_C3_G4	AAA	AA03	33	0.37	AA03
04	1vtq_A_G4_U5	NAN	NANT	0	0.42	AA04
05	1vtq_A_U5_G6	AAA	AA04	86	0.26	AA04
06	1vtq_A_G6_A7	A-B	AB05	58	0.21	AB05
07	1vtq_A_A7_U8	OPN	OP11	26	0.34	OP11
08	1vtq_A_U8_A9	NAN	NANT	0	0.96	IC03
09	1vtq_A_A9_G10	NAN	NANT	0	1.28	OP12
10	1vtq_A_G10_U11	AAA	AA00	31	0.33	AA00
11	1vtq_A_U11_U12	AAA	AA04	35	0.38	AA04
12	1vtq_A_A14_A15	AAA	AA08	40	0.40	AA08
13	1vtq_A_A15_H2U16	NAN	NANT	0	1.10	OP03
14	1vtq_A_H2U16_G17	NAN	NANT	0	1.46	OP09
15	1vtq_A_G17_G18	NAN	NANT	0	1.09	IC07
16	1vtq_A_G18_H2U19	NAN	NANT	0	1.42	OP17
17	1vtq_A_H2U19_C20	NAN	NANT	0	0.80	ZZS1
18	1vtq_A_C20_A21	NAN	NANT	0	0.64	OP13
19	1vtq_A_A21_G22	AAu	AA12	36	0.48	AA12
20	1vtq_A_G22_A23	AAw	AA10	48	0.17	AA10
21	1vtq_A_A23_A24	AAA	AA08	48	0.24	AA08
22	1vtq_A_A24_U25	AAA	AA00	15	0.27	AA00
23	1vtq_A_U25_G26	AAA	AA04	61	0.30	AA04
24	1vtq_A_G26_G27	AAA	AA04	84	0.18	AA04
25	1vtq_A_G27_G28	AAA	AA08	37	0.29	AA08
26	1vtq_A_G28_C29	AAA	AA00	49	0.30	AA00
27	1vtq_A_C29_G30	AAw	AA10	31	0.32	AA10
28	1vtq_A_G30_C31	AAA	AA03	50	0.29	AA03
29	1vtq_A_U33_G34	OPN	OP03	13	0.36	OP03
30	1vtq_A_G34_U35	AAA	AA08	22	0.38	AA08
31	1vtq_A_U35_C36	NAN	NANT	0	0.39	AA04
32	1vtq_A_C36_1MG37	AAA	AA04	57	0.28	AA04
33	1vtq_A_1MG37_C38	NAN	NANT	0	0.85	AA04
34	1vtq_A_C38_G39	NAN	NANT	0	0.75	AA04
35	1vtq_A_G39_U40	AAA	AA08	27	0.32	AA08
36	1vtq_A_U40_G41	AAA	AA00	61	0.27	AA00
37	1vtq_A_G41_C42	AAA	AA00	89	0.19	AA00
38	1vtq_A_C42_C43	AAA	AA04	31	0.43	AA04
39	1vtq_A_C43_A44	AAA	AA00	54	0.16	AA00
40	1vtq_A_A44_G45	AAA	AA08	71	0.30	AA08
41	1vtq_A_G45_A46	NAN	NANT	0	0.74	IC04
42	1vtq_A_A46_U47	NAN	NANT	0	0.58	IC04
43	1vtq_A_U47_5MC48	NAN	NANT	0	1.49	OP06
44	1vtq_A_5MC48_G49	AAA	AA03	80	0.25	AA03
45	1vtq_A_G49_G50	AAw	AA01	19	0.29	AA01
46	1vtq_A_G50_G51	AAA	AA08	76	0.28	AA08
47	1vtq_A_G51_G52	AAw	AA01	11	0.34	AA01
48	1vtq_A_G52_5MU53	AAA	AA08	43	0.30	AA08
49	1vtq_A_C55_A56	AAA	AA03	35	0.45	AA03
50	1vtq_A_A56_A57	ICL	IC01	27	0.43	IC01
51	1vtq_A_A57_U58	NAN	NANT	0	0.51	OP25
52	1vtq_A_U58_U59	NAN	NANT	0	0.51	AB05
53	1vtq_A_U59_C60	OPN	OP12	76	0.31	OP12
54	1vtq_A_C60_C61	AAA	AA04	65	0.23	AA04
55	1vtq_A_C61_C62	AAA	AA08	46	0.30	AA08
56	1vtq_A_C62_C63	AAA	AA03	95	0.14	AA03
57	1vtq_A_C63_G64	AAA	AA00	12	0.28	AA00
58	1vtq_A_G64_U65	AAA	AA04	28	0.42	AA04
59	1vtq_A_U65_C66	AAA	AA00	36	0.24	AA00
60	1vtq_A_C66_G67	AAA	AA00	44	0.24	AA00
61	1vtq_A_G67_C68	NAN	NANT	0	0.45	AA04
62	1vtq_A_C68_G69	AAA	AA08	62	0.31	AA08
63	1vtq_A_G69_G70	AAA	AA04	57	0.29	AA04
64	1vtq_A_G70_A71	AAA	AA04	46	0.31	AA04
65	1vtq_A_A71_G72	AAA	AA00	59	0.28	AA00
66	1vtq_A_G72_C73	AAA	AA00	60	0.21	AA00
67	1vtq_A_C73_C74	AAA	AA00	38	0.41	AA00
68	1vtq_A_C74_A75	AAA	AA00	80	0.31	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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