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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
CRYSTAL STRUCTURE OF THE COLICIN E9, MUTANT HIS103ALA, IN COMPLEX WITH ZN+2 AND DSDNA (RESOLUTION 2.4A)

Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011v15_E_DC2_DG3NANNANT00.91 OP14
021v15_E_DG3_DA4NANNANT00.37 BB02
031v15_E_DA4_DT5B-ABA05670.26 BA05
041v15_E_DT5_DC6NANNANT00.68 AA04
051v15_E_DC6_DG7AAAAA04570.29 AA04
061v15_E_DG7_DC8A-BAB05150.27 AB05
071v15_F_DG9_DC10AAAAA08720.26 AA08
081v15_F_DC10_DG11AAAAA00650.18 AA00
091v15_F_DG11_DA12AAAAA04510.25 AA04
101v15_F_DA12_DT13A-BAB01280.30 AB01
111v15_F_DT13_DC14BBBBB00830.16 BB00
121v15_F_DC14_DG15NANNANT00.50 BA08
131v15_F_DG15_DC16NANNANT02.06 OP10
141v15_G_DG3_DA4BBwBB02350.31 BB02
151v15_G_DA4_DT5BBBBB00320.27 BB00
161v15_G_DT5_DC6NANNANT00.47 BA08
171v15_G_DC6_DG7AAAAA00600.24 AA00
181v15_G_DG7_DC8A-BAB05480.33 AB05
191v15_H_DG9_DC10AAAAA00100.47 AA00
201v15_H_DC10_DG11NANNANT00.52 AB02
211v15_H_DG11_DA12BBBBB00580.32 BB00
221v15_H_DA12_DT13BBBBB00640.30 BB00
231v15_H_DT13_DC14BBBBB01870.19 BB01
241v15_H_DC14_DG15BBBBB00410.40 BB00
251v15_H_DG15_DC16NANNANT01.90 IC01
261v15_I_DC2_DG3NANNANT01.14 OP13
271v15_I_DG3_DA4NANNANT00.39 BB02
281v15_I_DA4_DT5BBBBB01180.36 BB01
291v15_I_DT5_DC6B-ABA13820.22 BA13
301v15_I_DC6_DG7AAAAA04800.19 AA04
311v15_I_DG7_DC8A-BAB05150.23 AB05
321v15_J_DG9_DC10AAAAA04390.60 AA04
331v15_J_DC10_DG11NANNANT00.53 AB02
341v15_J_DG11_DA12miBBB15540.25 BB15
351v15_J_DA12_DT13BBBBB00470.31 BB00
361v15_J_DT13_DC14BBBBB00720.18 BB00
371v15_J_DC14_DG15BBBBB00220.40 BB00
381v15_J_DG15_DC16NANNANT00.50 OP11
391v15_K_DG3_DA4BBBBB00620.29 BB00
401v15_K_DA4_DT5BBBBB00530.27 BB00
411v15_K_DT5_DC6NANNANT00.47 BA08
421v15_K_DC6_DG7AAAAA00150.26 AA00
431v15_K_DG7_DC8A-BAB01330.35 AB01
441v15_L_DG9_DC10NANNANT00.74 AB02
451v15_L_DC10_DG11NANNANT00.45 AA10
461v15_L_DG11_DA12NANNANT00.53 BB16
471v15_L_DA12_DT13BBBBB01670.22 BB01
481v15_L_DT13_DC14NANNANT00.38 BB17
491v15_L_DC14_DG15NANNANT00.72 BB11
501v15_L_DG15_DC16NANNANT01.92 ZZ1S

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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