DNATCO v4.1: results

Crystal structure of the specificity domain of Ribonuclease P of the A-type

Results of the assignment of 153 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1u9s_A_G76_G77	NAN	NANT	0	0.59	AA12
002	1u9s_A_G77_U78	AAA	AA00	79	0.17	AA00
003	1u9s_A_U78_G79	AAA	AA00	53	0.27	AA00
004	1u9s_A_G79_C80	NAN	NANT	0	1.70	OP16
005	1u9s_A_C80_C81	AAw	AA01	38	0.29	AA01
006	1u9s_A_C81_A82	AAA	AA00	13	0.40	AA00
007	1u9s_A_A82_G83	AAA	AA00	86	0.16	AA00
008	1u9s_A_G83_G84	AAA	AA00	83	0.24	AA00
009	1u9s_A_G84_U85	AAA	AA08	14	0.55	AA08
010	1u9s_A_U85_A86	OPN	OP03	54	0.28	OP03
011	1u9s_A_A86_A87	AAw	AA01	11	0.43	AA01
012	1u9s_A_A87_C88	NAN	NANT	0	0.58	AA10
013	1u9s_A_C88_G89	OPN	OP03	35	0.39	OP03
014	1u9s_A_G89_C90	NAN	NANT	0	1.55	OP01
015	1u9s_A_C90_C91	AAA	AA00	90	0.16	AA00
016	1u9s_A_C91_U92	AAA	AA00	33	0.23	AA00
017	1u9s_A_U92_G93	AAA	AA08	63	0.41	AA08
018	1u9s_A_G93_G94	AAA	AA00	66	0.24	AA00
019	1u9s_A_G94_G95	AAA	AA00	61	0.32	AA00
020	1u9s_A_G95_C96	AAA	AA00	80	0.20	AA00
021	1u9s_A_C96_G97	AAA	AA00	87	0.14	AA00
022	1u9s_A_G97_G98	AAA	AA00	89	0.22	AA00
023	1u9s_A_G98_G99	AAA	AA00	56	0.24	AA00
024	1u9s_A_G99_G100	AAA	AA00	81	0.25	AA00
025	1u9s_A_G100_U101	OPN	OP03	87	0.09	OP03
026	1u9s_A_U101_A102	AAA	AA08	61	0.33	AA08
027	1u9s_A_A102_A103	AAA	AA09	77	0.19	AA09
028	1u9s_A_A103_C104	NAN	NANT	0	0.87	AA04
029	1u9s_A_C104_C105	AAA	AA00	86	0.15	AA00
030	1u9s_A_C105_C106	AAA	AA00	32	0.32	AA00
031	1u9s_A_C106_G107	AAw	AA01	86	0.17	AA01
032	1u9s_A_G107_A108	NAN	NANT	0	1.77	OP17
033	1u9s_A_A108_C109	NAN	NANT	0	0.96	OP30
034	1u9s_A_C109_G110	NAN	NANT	0	0.46	OP30
035	1u9s_A_G110_G111	AAA	AA00	20	0.42	AA00
036	1u9s_A_G111_A112	NAN	NANT	0	0.62	AA12
037	1u9s_A_A112_A113	NAN	NANT	0	0.85	OP30
038	1u9s_A_A113_A114	NAN	NANT	0	0.48	OP30
039	1u9s_A_A114_G115	AAA	AA04	39	0.49	AA04
040	1u9s_A_G115_U116	AAA	AA00	87	0.15	AA00
041	1u9s_A_U116_G117	AAA	AA00	81	0.29	AA00
042	1u9s_A_G117_C118	AAA	AA00	80	0.29	AA00
043	1u9s_A_C118_C119	AAA	AA00	46	0.35	AA00
044	1u9s_A_C119_A120	OPN	OP02	25	0.59	OP02
045	1u9s_A_A120_C121	AAA	AA08	59	0.33	AA08
046	1u9s_A_C121_A122	NAN	NANT	0	0.61	AA04
047	1u9s_A_A122_G123	AAA	AA04	32	0.52	AA04
048	1u9s_A_G123_A124	OPN	OP04	78	0.23	OP04
049	1u9s_A_A124_G125	AAA	AA00	20	0.37	AA00
050	1u9s_A_G125_A126	NAN	NANT	0	0.49	IC01
051	1u9s_A_A126_A127	NAN	NANT	0	1.37	BB14
052	1u9s_A_A127_G128	NAN	NANT	0	1.36	IC04
053	1u9s_A_G128_A129	NAN	NANT	0	1.19	AA13
054	1u9s_A_A129_G130	AAA	AA09	70	0.29	AA09
055	1u9s_A_G130_A131	NAN	NANT	0	0.75	AB05
056	1u9s_A_A131_C132	NAN	NANT	0	0.38	OP26
057	1u9s_A_C132_C133	AAA	AA00	66	0.23	AA00
058	1u9s_A_C133_G134	AAA	AA04	26	0.66	AA04
059	1u9s_A_G134_C135	AAA	AA00	73	0.24	AA00
060	1u9s_A_C135_C136	AAw	AA01	43	0.17	AA01
061	1u9s_A_C136_A137	NAN	NANT	0	0.63	IC06
062	1u9s_A_A137_G138	NAN	NANT	0	0.99	OP26
063	1u9s_A_G138_C139	AAA	AA00	12	0.38	AA00
064	1u9s_A_C139_G140	AAA	AA00	46	0.27	AA00
065	1u9s_A_G140_G141	AAA	AA00	59	0.33	AA00
066	1u9s_A_G141_C142	AAA	AA00	70	0.17	AA00
067	1u9s_A_C142_C143	AAA	AA00	62	0.28	AA00
068	1u9s_A_C143_G144	AAA	AA00	90	0.18	AA00
069	1u9s_A_G144_G145	AAw	AA01	67	0.28	AA01
070	1u9s_A_G145_G146	AAA	AA00	28	0.42	AA00
071	1u9s_A_G146_G147	AAA	AA00	66	0.29	AA00
072	1u9s_A_C152_C153	AAw	AA06	69	0.41	AA06
073	1u9s_A_C153_C154	AAA	AA00	81	0.15	AA00
074	1u9s_A_C154_C155	AAA	AA00	61	0.27	AA00
075	1u9s_A_C155_G156	AAA	AA00	80	0.13	AA00
076	1u9s_A_G156_G157	AAA	AA00	71	0.28	AA00
077	1u9s_A_G157_U158	AAw	AA01	58	0.16	AA01
078	1u9s_A_U158_G159	NAN	NANT	0	0.86	IC01
079	1u9s_A_G159_C160	NAN	NANT	0	1.39	AA13
080	1u9s_A_C160_G161	AAA	AA00	36	0.30	AA00
081	1u9s_A_G161_G162	NAN	NANT	0	0.74	AA04
082	1u9s_A_G162_G163	AAA	AA00	79	0.14	AA00
083	1u9s_A_G163_C164	AAA	AA00	41	0.38	AA00
084	1u9s_A_C164_A165	AAA	AA09	44	0.27	AA09
085	1u9s_A_A165_A166	NAN	NANT	0	1.77	AA01
086	1u9s_A_A166_G167	NAN	NANT	0	0.81	AA12
087	1u9s_A_G167_G168	AAA	AA00	22	0.39	AA00
088	1u9s_A_G168_G169	AAA	AA00	84	0.20	AA00
089	1u9s_A_G169_U170	AAA	AA00	14	0.40	AA00
090	1u9s_A_U170_G171	AAA	AA00	41	0.34	AA00
091	1u9s_A_G171_A172	OPN	OP03	82	0.21	OP03
092	1u9s_A_A172_A173	AAA	AA00	45	0.36	AA00
093	1u9s_A_A173_A174	ICL	IC01	48	0.42	IC01
094	1u9s_A_A174_C175	NAN	NANT	0	0.49	OP15
095	1u9s_A_C175_G176	NAN	NANT	0	1.10	OP06
096	1u9s_A_G176_G177	AAA	AA00	57	0.28	AA00
097	1u9s_A_G177_C178	AAA	AA00	81	0.22	AA00
098	1u9s_A_C178_G179	AAA	AA00	82	0.14	AA00
099	1u9s_A_G179_G180	AAw	AA01	92	0.18	AA01
100	1u9s_A_G180_G181	AAA	AA00	85	0.26	AA00
101	1u9s_A_G181_G182	AAA	AA00	9	0.51	AA00
102	1u9s_A_G182_U183	AAA	AA00	80	0.20	AA00
103	1u9s_A_U183_A184	OPN	OP04	59	0.16	OP04
104	1u9s_A_A184_A185	AAA	AA08	73	0.21	AA08
105	1u9s_A_A185_G186	AAw	AA01	55	0.29	AA01
106	1u9s_A_G186_A187	AAA	AA00	76	0.12	AA00
107	1u9s_A_A187_G188	NAN	NANT	0	1.27	OP17
108	1u9s_A_G188_C189	NAN	NANT	0	1.89	ZZS1
109	1u9s_A_C189_C190	AAA	AA00	75	0.22	AA00
110	1u9s_A_C190_C191	AAA	AA00	70	0.25	AA00
111	1u9s_A_C191_A192	AAA	AA00	64	0.26	AA00
112	1u9s_A_A192_C193	AAA	AA00	83	0.15	AA00
113	1u9s_A_C193_C194	AAA	AA00	16	0.35	AA00
114	1u9s_A_C194_G195	AAA	AA04	47	0.39	AA04
115	1u9s_A_G195_C196	AAA	AA00	71	0.20	AA00
116	1u9s_A_C196_C197	AAA	AA00	52	0.16	AA00
117	1u9s_A_C197_U198	AAA	AA00	16	0.33	AA00
118	1u9s_A_U198_G199	NAN	NANT	0	0.79	AB02
119	1u9s_A_G199_G200	AAA	AA00	85	0.23	AA00
120	1u9s_A_G200_C201	AAA	AA00	83	0.23	AA00
121	1u9s_A_C201_C202	AAA	AA00	92	0.23	AA00
122	1u9s_A_C202_U203	AAA	AA00	63	0.30	AA00
123	1u9s_A_U203_G204	AAw	AA01	94	0.16	AA01
124	1u9s_A_G204_G205	AAA	AA08	79	0.34	AA08
125	1u9s_A_G205_C206	OPN	OP03	45	0.16	OP03
126	1u9s_A_C206_A207	AAA	AA08	60	0.42	AA08
127	1u9s_A_A207_A208	AAA	AA09	91	0.22	AA09
128	1u9s_A_A208_C209	NAN	NANT	0	0.93	AA04
129	1u9s_A_C209_A210	AAA	AA00	82	0.18	AA00
130	1u9s_A_A210_G211	AAA	AA00	94	0.22	AA00
131	1u9s_A_G211_G212	AAA	AA00	85	0.22	AA00
132	1u9s_A_G212_C213	AAA	AA00	92	0.22	AA00
133	1u9s_A_C213_C214	AAA	AA00	52	0.25	AA00
134	1u9s_A_C214_G215	AAw	AA10	60	0.23	AA10
135	1u9s_A_G215_G216	AAA	AA08	74	0.18	AA08
136	1u9s_A_G216_G217	AAA	AA08	67	0.25	AA08
137	1u9s_A_G217_G218	NAN	NANT	0	0.35	IC03
138	1u9s_A_G218_C219	NAN	NANT	0	1.11	AB02
139	1u9s_A_C219_A220	NAN	NANT	0	1.16	AA07
140	1u9s_A_A220_C221	NAN	NANT	0	1.66	OP19
141	1u9s_A_C221_G222	NAN	NANT	0	0.54	OP29
142	1u9s_A_G222_G223	AAA	AA00	56	0.20	AA00
143	1u9s_A_G223_C224	AAw	AA01	67	0.22	AA01
144	1u9s_A_C224_A225	NAN	NANT	0	0.97	AA08
145	1u9s_A_A225_A226	NAN	NANT	0	1.09	OP30
146	1u9s_A_A226_A227	NAN	NANT	0	1.09	OP30
147	1u9s_A_A227_C228	AAA	AA00	59	0.27	AA00
148	1u9s_A_C228_C229	AAw	AA05	57	0.31	AA05
149	1u9s_A_C229_C230	AAA	AA00	40	0.29	AA00
150	1u9s_A_C230_C231	AAA	AA00	75	0.42	AA00
151	1u9s_A_C231_A232	AAA	AA00	49	0.24	AA00
152	1u9s_A_A232_C233	AAA	AA00	84	0.15	AA00
153	1u9s_A_C233_C234	AAA	AA00	84	0.28	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 153 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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