DNATCO v4.1: results

How CCA is added to the 3' end of immature tRNA without the use of an oligonucleotide template

Results of the assignment of 70 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1tfw_E_G1_C2	AAA	AA00	56	0.28	AA00
02	1tfw_E_C2_G3	AAA	AA00	92	0.13	AA00
03	1tfw_E_G3_G4	AAA	AA00	92	0.11	AA00
04	1tfw_E_G4_A5	AAA	AA00	94	0.11	AA00
05	1tfw_E_A5_U6	AAA	AA00	89	0.17	AA00
06	1tfw_E_U6_C7	AAA	AA04	91	0.13	AA04
07	1tfw_E_C7_C8	AAA	AA00	86	0.17	AA00
08	1tfw_E_C8_G9	AAA	AA00	82	0.15	AA00
09	1tfw_E_G9_C10	AAA	AA08	86	0.18	AA08
10	1tfw_E_C10_A11	NAN	NANT	0	0.39	AA04
11	1tfw_E_A11_C12	AAw	AA10	41	0.28	AA10
12	1tfw_H_G63_C64	AAw	AA01	32	0.23	AA01
13	1tfw_H_C64_G65	AAA	AA00	85	0.18	AA00
14	1tfw_H_G65_G66	AAw	AA01	52	0.31	AA01
15	1tfw_H_G66_A67	AAA	AA00	74	0.27	AA00
16	1tfw_H_A67_U68	AAA	AA08	81	0.19	AA08
17	1tfw_H_U68_C69	AAA	AA00	79	0.17	AA00
18	1tfw_H_C69_C70	AAA	AA00	64	0.19	AA00
19	1tfw_H_C70_G71	AAA	AA00	91	0.09	AA00
20	1tfw_H_G71_C72	AAA	AA00	76	0.18	AA00
21	1tfw_H_C72_A73	AAA	AA00	67	0.18	AA00
22	1tfw_H_A73_C74	AAA	AA00	70	0.28	AA00
23	1tfw_H_C74_C75	NAN	NANT	0	0.57	OP12
24	1tfw_F_G1_C2	AAA	AA00	39	0.34	AA00
25	1tfw_F_C2_G3	AAA	AA00	93	0.11	AA00
26	1tfw_F_G3_G4	AAA	AA00	40	0.16	AA00
27	1tfw_F_G4_A5	AAA	AA08	85	0.17	AA08
28	1tfw_F_A5_C6	AAA	AA00	82	0.17	AA00
29	1tfw_F_C6_C7	AAA	AA00	91	0.15	AA00
30	1tfw_F_C7_C8	AAA	AA00	76	0.21	AA00
31	1tfw_F_C8_G9	AAA	AA00	82	0.17	AA00
32	1tfw_F_G9_C10	AAA	AA00	87	0.12	AA00
33	1tfw_F_C10_A11	AAA	AA04	88	0.23	AA04
34	1tfw_F_A11_C12	AAA	AA04	82	0.20	AA04
35	1tfw_I_G63_C64	AAw	AA06	41	0.31	AA06
36	1tfw_I_C64_G65	AAA	AA00	84	0.21	AA00
37	1tfw_I_G65_G66	AAA	AA04	97	0.16	AA04
38	1tfw_I_G66_A67	AAw	AA10	56	0.26	AA10
39	1tfw_I_A67_U68	AAA	AA08	15	0.36	AA08
40	1tfw_I_U68_C69	AAw	AA11	79	0.21	AA11
41	1tfw_I_C69_C70	AAA	AA08	83	0.30	AA08
42	1tfw_I_C70_G71	AAA	AA00	85	0.16	AA00
43	1tfw_I_G71_C72	AAA	AA00	92	0.17	AA00
44	1tfw_I_C72_A73	AAA	AA00	61	0.20	AA00
45	1tfw_I_A73_C74	AAA	AA00	60	0.27	AA00
46	1tfw_I_C74_C75	NAN	NANT	0	0.65	OP12
47	1tfw_G_G2_C3	NAN	NANT	0	0.43	AA05
48	1tfw_G_C3_G4	AAA	AA00	52	0.29	AA00
49	1tfw_G_G4_G5	AAA	AA00	50	0.34	AA00
50	1tfw_G_G5_A6	AAA	AA08	72	0.26	AA08
51	1tfw_G_A6_U7	AAA	AA00	86	0.14	AA00
52	1tfw_G_U7_C8	AAA	AA00	91	0.14	AA00
53	1tfw_G_C8_C9	AAA	AA00	83	0.16	AA00
54	1tfw_G_C9_G10	AAA	AA00	97	0.10	AA00
55	1tfw_G_G10_C11	AAA	AA00	96	0.18	AA00
56	1tfw_G_C11_A12	AAA	AA00	29	0.24	AA00
57	1tfw_G_A12_C13	AAA	AA02	54	0.33	AA02
58	1tfw_G_C13_C14	NAN	NANT	0	1.56	BB1S
59	1tfw_J_C61_G62	AAA	AA08	73	0.30	AA08
60	1tfw_J_G62_C63	AAA	AA00	92	0.12	AA00
61	1tfw_J_C63_G64	AAA	AA00	92	0.13	AA00
62	1tfw_J_G64_G65	AAA	AA00	88	0.12	AA00
63	1tfw_J_G65_A66	AAA	AA00	90	0.14	AA00
64	1tfw_J_A66_U67	AAA	AA00	86	0.18	AA00
65	1tfw_J_U67_C68	AAA	AA00	88	0.20	AA00
66	1tfw_J_C68_C69	AAw	AA10	82	0.21	AA10
67	1tfw_J_C69_G70	AAA	AA04	76	0.34	AA04
68	1tfw_J_G70_C71	NAN	NANT	0	1.07	OP23
69	1tfw_J_C71_A72	AAA	AA00	44	0.23	AA00
70	1tfw_J_A72_C73	AAA	AA08	74	0.23	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 70 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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