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Conformers: ABBIImiBZICOPNSYNN
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HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE BOUND TO DNA CONTAINING O6-METHYLGUANINE

Results of the assignment of 24 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011t38_B_DG1_DC2BBBBB00460.42 BB00
021t38_B_DC2_DC3BBBBB00540.22 BB00
031t38_B_DC3_DA4BBBBB00430.44 BB00
041t38_B_DA4_DT5BBwBB02480.22 BB02
051t38_B_DT5_DG6BBBBB00600.32 BB00
061t38_B_DG6_6OG7NANNANT00.83 OP25
071t38_B_6OG7_DC8NANNANT01.00 OP13
081t38_B_DC8_DT9BBwBB02850.16 BB02
091t38_B_DT9_DA10BBBBB00770.35 BB00
101t38_B_DA10_DG11BBBBB00430.36 BB00
111t38_B_DG11_DT12BBBBB00610.23 BB00
121t38_B_DT12_DA13B12BB04360.25 BB04
131t38_C_DT14_DA15NANNANT00.39 BB17
141t38_C_DA15_DC16BBBBB00100.48 BB00
151t38_C_DC16_DT17BBBBB00170.47 BB00
161t38_C_DT17_DA18BBBBB00500.31 BB00
171t38_C_DA18_DG19BBwBB11370.31 BB11
181t38_C_DG19_DC20NANNANT00.56 BB02
191t38_C_DC20_DC21NANNANT00.38 BB02
201t38_C_DC21_DA22B12BB04490.38 BB04
211t38_C_DA22_DT23miBBB13610.30 BB13
221t38_C_DT23_DG24BBBBB00460.48 BB00
231t38_C_DG24_DG25NANNANT00.46 BB02
241t38_C_DG25_DC26BBwBB02230.53 BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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