DNATCO v4.1: results

Structure Of The DNA Binding Domains Of IRF3, ATF-2 and Jun Bound To DNA

Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1t2k_E_DT1_DA2	BBB	BB00	83	0.19	BB00
02	1t2k_E_DA2_DA3	BBw	BB11	88	0.20	BB11
03	1t2k_E_DA3_DA4	BBw	BB02	15	0.37	BB02
04	1t2k_E_DA4_DT5	BBB	BB00	67	0.26	BB00
05	1t2k_E_DT5_DG6	B12	BB04	85	0.15	BB04
06	1t2k_E_DG6_DA7	BBw	BB02	84	0.20	BB02
07	1t2k_E_DA7_DC8	BBw	BB02	79	0.22	BB02
08	1t2k_E_DC8_DA9	BBB	BB00	91	0.20	BB00
09	1t2k_E_DA9_DT10	BBw	BB02	53	0.30	BB02
10	1t2k_E_DT10_DA11	BBB	BB00	58	0.23	BB00
11	1t2k_E_DA11_DG12	BBB	BB00	82	0.19	BB00
12	1t2k_E_DG12_DG13	BBw	BB02	57	0.20	BB02
13	1t2k_E_DG13_DA14	BBB	BB00	70	0.40	BB00
14	1t2k_E_DA14_DA15	BBw	BB02	93	0.20	BB02
15	1t2k_E_DA15_DA16	BBB	BB00	68	0.30	BB00
16	1t2k_E_DA16_DA17	BBw	BB02	53	0.44	BB02
17	1t2k_E_DA17_DC18	BBB	BB00	27	0.38	BB00
18	1t2k_E_DC18_DT19	BBw	BB02	82	0.21	BB02
19	1t2k_E_DT19_DG20	B12	BB04	63	0.43	BB04
20	1t2k_E_DG20_DA21	BBB	BB00	95	0.13	BB00
21	1t2k_E_DA21_DA22	BBB	BB00	79	0.22	BB00
22	1t2k_E_DA22_DA23	BBw	BB11	50	0.29	BB11
23	1t2k_E_DA23_DG24	BBw	BB02	25	0.32	BB02
24	1t2k_E_DG24_DG25	miB	BB13	29	0.39	BB13
25	1t2k_E_DG25_DG26	BBw	BB16	68	0.25	BB16
26	1t2k_E_DG26_DA27	BB2	BB07	69	0.27	BB07
27	1t2k_E_DA27_DG28	NAN	NANT	0	0.52	BB08
28	1t2k_E_DG28_DA29	BBB	BB00	42	0.36	BB00
29	1t2k_E_DA29_DA30	BBw	BB02	97	0.16	BB02
30	1t2k_E_DA30_DG31	BBB	BB00	57	0.25	BB00
31	1t2k_F_DA1_DC2	BBB	BB00	72	0.32	BB00
32	1t2k_F_DC2_DT3	BBw	BB02	86	0.23	BB02
33	1t2k_F_DT3_DT4	BBw	BB03	81	0.21	BB03
34	1t2k_F_DT4_DC5	miB	BB13	37	0.31	BB13
35	1t2k_F_DC5_DT6	NAN	NANT	0	0.58	BB02
36	1t2k_F_DT6_DC7	BBB	BB00	84	0.24	BB00
37	1t2k_F_DC7_DC8	BBw	BB02	75	0.16	BB02
38	1t2k_F_DC8_DC9	B12	BB05	19	0.40	BB05
39	1t2k_F_DC9_DT10	NAN	NANT	0	0.33	BB03
40	1t2k_F_DT10_DT11	BBw	BB02	37	0.26	BB02
41	1t2k_F_DT11_DT12	BBB	BB00	40	0.25	BB00
42	1t2k_F_DT12_DC13	NAN	NANT	0	0.69	BB07
43	1t2k_F_DC13_DA14	BBB	BB00	31	0.37	BB00
44	1t2k_F_DA14_DG15	NAN	NANT	0	0.78	BB02
45	1t2k_F_DG15_DT16	BBw	BB03	48	0.30	BB03
46	1t2k_F_DT16_DT17	BBB	BB00	57	0.32	BB00
47	1t2k_F_DT17_DT18	BBw	BB02	64	0.39	BB02
48	1t2k_F_DT18_DT19	BBw	BB02	71	0.32	BB02
49	1t2k_F_DT19_DC20	BBB	BB00	69	0.32	BB00
50	1t2k_F_DC20_DC21	BBw	BB02	68	0.20	BB02
51	1t2k_F_DC21_DT22	BBB	BB00	65	0.25	BB00
52	1t2k_F_DT22_DA23	BBB	BB00	72	0.17	BB00
53	1t2k_F_DA23_DT24	BBw	BB02	79	0.26	BB02
54	1t2k_F_DT24_DG25	BBB	BB00	73	0.24	BB00
55	1t2k_F_DG25_DT26	BBB	BB00	81	0.25	BB00
56	1t2k_F_DT26_DC27	miB	BB13	78	0.18	BB13
57	1t2k_F_DC27_DA28	BBB	BB00	49	0.47	BB00
58	1t2k_F_DA28_DT29	BBw	BB02	75	0.20	BB02
59	1t2k_F_DT29_DT30	BBw	BB02	56	0.29	BB02
60	1t2k_F_DT30_DT31	BBB	BB00	43	0.36	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

IC

OPN

Z

N

Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible