DNATCO v4.1: results

Crystal Structure of 2-aminopurine labelled bacterial decoding site RNA

Results of the assignment of 62 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1t0d_A_G1_G2	AAA	AA00	89	0.23	AA00
02	1t0d_A_G2_U3	AAA	AA00	94	0.12	AA00
03	1t0d_A_U3_G4	AAA	AA00	95	0.11	AA00
04	1t0d_A_G4_G5	AAA	AA00	96	0.11	AA00
05	1t0d_A_G5_U6	AAA	AA00	86	0.23	AA00
06	1t0d_A_U6_G7	AAA	AA00	68	0.24	AA00
07	1t0d_A_G7_MTU8	AAA	AA00	22	0.25	AA00
08	1t0d_A_MTU8_A9	NAN	NANT	0	0.49	OP09
09	1t0d_A_A9_G10	NAN	NANT	0	0.81	OP30
10	1t0d_A_G10_U11	AAA	AA00	58	0.34	AA00
11	1t0d_A_U11_C12	AAA	AA00	31	0.40	AA00
12	1t0d_A_C12_G13	AAw	AA01	50	0.47	AA01
13	1t0d_A_G13_C14	AAA	AA00	88	0.12	AA00
14	1t0d_A_C14_U15	AAA	AA00	87	0.12	AA00
15	1t0d_A_U15_G16	AAA	AA00	87	0.15	AA00
16	1t0d_A_G16_G17	AAA	AA00	85	0.18	AA00
17	1t0d_B_C20_A21	AAA	AA00	83	0.15	AA00
18	1t0d_B_A21_G22	AAA	AA00	95	0.10	AA00
19	1t0d_B_G22_C23	AAA	AA00	90	0.16	AA00
20	1t0d_B_C23_G24	AAA	AA00	75	0.21	AA00
21	1t0d_B_G24_U25	AAA	AA00	41	0.38	AA00
22	1t0d_B_U25_C26	AAA	AA00	86	0.19	AA00
23	1t0d_B_C26_A27	AAA	AA00	92	0.11	AA00
24	1t0d_B_A27_C28	AAA	AA00	85	0.23	AA00
25	1t0d_B_C28_A29	AAA	AA00	90	0.12	AA00
26	1t0d_B_A29_C30	AAA	AA00	95	0.09	AA00
27	1t0d_B_C30_C31	AAA	AA00	91	0.15	AA00
28	1t0d_B_C31_A32	AAA	AA00	97	0.10	AA00
29	1t0d_B_A32_C33	AAA	AA00	88	0.16	AA00
30	1t0d_B_C33_C34	AAA	AA00	94	0.15	AA00
31	1t0d_B_C34_C35	AAA	AA00	64	0.19	AA00
32	1t0d_C_G1_G2	AAA	AA00	64	0.28	AA00
33	1t0d_C_G2_U3	AAA	AA00	75	0.24	AA00
34	1t0d_C_U3_G4	AAA	AA00	90	0.14	AA00
35	1t0d_C_G4_G5	AAA	AA00	93	0.19	AA00
36	1t0d_C_G5_U6	AAA	AA00	99	0.10	AA00
37	1t0d_C_U6_G7	AAA	AA08	37	0.32	AA08
38	1t0d_C_G7_MTU8	NAN	NANT	0	0.99	OP13
39	1t0d_C_MTU8_A9	AAA	AA08	68	0.37	AA08
40	1t0d_C_A9_G10	NAN	NANT	0	2.15	OP16
41	1t0d_C_G10_U11	AAA	AA00	52	0.32	AA00
42	1t0d_C_U11_C12	AAA	AA08	81	0.23	AA08
43	1t0d_C_C12_G13	AAA	AA00	90	0.14	AA00
44	1t0d_C_G13_C14	AAA	AA00	93	0.13	AA00
45	1t0d_C_C14_U15	AAA	AA00	88	0.15	AA00
46	1t0d_C_U15_G16	AAA	AA00	75	0.19	AA00
47	1t0d_C_G16_G17	AAA	AA00	63	0.24	AA00
48	1t0d_D_C20_A21	AAA	AA00	72	0.25	AA00
49	1t0d_D_A21_G22	AAA	AA00	97	0.09	AA00
50	1t0d_D_G22_C23	AAA	AA00	90	0.12	AA00
51	1t0d_D_C23_G24	AAA	AA00	86	0.14	AA00
52	1t0d_D_G24_U25	AAA	AA00	55	0.34	AA00
53	1t0d_D_U25_C26	AAA	AA00	80	0.23	AA00
54	1t0d_D_C26_A27	AAA	AA00	89	0.23	AA00
55	1t0d_D_A27_C28	AAA	AA00	84	0.23	AA00
56	1t0d_D_C28_A29	AAA	AA00	98	0.09	AA00
57	1t0d_D_A29_C30	AAA	AA00	89	0.12	AA00
58	1t0d_D_C30_C31	AAA	AA00	87	0.20	AA00
59	1t0d_D_C31_A32	AAA	AA00	89	0.12	AA00
60	1t0d_D_A32_C33	AAA	AA00	84	0.23	AA00
61	1t0d_D_C33_C34	AAA	AA00	65	0.27	AA00
62	1t0d_D_C34_C35	AAA	AA00	82	0.17	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 62 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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