DNATCO v4.1: results

THE 2.9 ANGSTROMS CRYSTAL STRUCTURE OF T. THERMOPHILUS SERYL-TRNA SYNTHETASE COMPLEXED WITH TRNA SER

Results of the assignment of 59 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1ser_T_G4_A5	AAA	AA00	75	0.25	AA00
02	1ser_T_A5_G6	AAw	AA01	90	0.14	AA01
03	1ser_T_G6_G7	NAN	NANT	0	0.52	AA03
04	1ser_T_G7_U8	NAN	NANT	0	0.98	OP12
05	1ser_T_U8_G9	NAN	NANT	0	0.48	AA07
06	1ser_T_G9_C10	NAN	NANT	0	1.48	OP04
07	1ser_T_C10_C11	AAA	AA00	70	0.21	AA00
08	1ser_T_C11_C12	AAA	AA08	63	0.30	AA08
09	1ser_T_C12_G13	AAw	AA05	36	0.36	AA05
10	1ser_T_G13_A14	AAu	AA12	67	0.24	AA12
11	1ser_T_A14_G15	AAA	AA08	78	0.29	AA08
12	1ser_T_G15_U16	NAN	NANT	0	1.66	AA11
13	1ser_T_U16_G18	NAN	NANT	0	1.75	OPS1
14	1ser_T_G18_G19	NAN	NANT	0	0.45	IC05
15	1ser_T_G19_C20	NAN	NANT	0	1.08	OP20
16	1ser_T_C20_H2U20.A	NAN	NANT	0	1.64	OP04
17	1ser_T_G20.B_A21	NAN	NANT	0	0.87	ZZ02
18	1ser_T_H2U20.A_G20.B	NAN	NANT	0	2.32	OP19
19	1ser_T_A21_A22	OPN	OP07	10	0.59	OP07
20	1ser_T_A22_G23	AAA	AA00	14	0.44	AA00
21	1ser_T_G23_G24	AAu	AA12	46	0.46	AA12
22	1ser_T_G24_G25	NAN	NANT	0	0.56	AB02
23	1ser_T_G42_G43	AAA	AA08	56	0.28	AA08
24	1ser_T_G43_U44	AAA	AA00	42	0.45	AA00
25	1ser_T_U44_A45	NAN	NANT	0	1.39	OP11
26	1ser_T_A45_G46	NAN	NANT	0	0.60	AB02
27	1ser_T_G46_G47	AAA	AA08	82	0.21	AA08
28	1ser_T_C47.K_C47.L	AAA	AA00	76	0.17	AA00
29	1ser_T_C47.L_U47.M	AAA	AA00	68	0.26	AA00
30	1ser_T_C47.N_C47.O	AAA	AA08	68	0.21	AA08
31	1ser_T_C47.O_C47.P	AAA	AA00	68	0.30	AA00
32	1ser_T_C47.P_U47.Q	AAA	AA00	75	0.22	AA00
33	1ser_T_G47.A_G47.B	AAw	AA01	51	0.36	AA01
34	1ser_T_G47.B_G47.C	AAA	AA08	70	0.21	AA08
35	1ser_T_G47.C_G47.D	AAA	AA00	73	0.30	AA00
36	1ser_T_G47_G47.A	AAA	AA08	69	0.22	AA08
37	1ser_T_U47.M_C47.N	AAA	AA08	66	0.38	AA08
38	1ser_T_U47.Q_C48	ICL	IC02	42	0.49	IC02
39	1ser_T_C48_G49	NAN	NANT	0	1.57	OP05
40	1ser_T_G49_C50	AAA	AA04	71	0.35	AA04
41	1ser_T_C50_G51	AAA	AA00	67	0.17	AA00
42	1ser_T_G51_G52	AAA	AA08	77	0.23	AA08
43	1ser_T_G52_G53	AAA	AA08	70	0.31	AA08
44	1ser_T_G53_5MU54	AAA	AA00	56	0.30	AA00
45	1ser_T_C56_G57	AAA	AA08	74	0.26	AA08
46	1ser_T_G57_A58	ICL	IC01	70	0.43	IC01
47	1ser_T_A58_A59	OPN	OP25	16	0.28	OP25
48	1ser_T_A59_U60	A-B	AB05	18	0.34	AB05
49	1ser_T_U60_C61	OPN	OP12	33	0.26	OP12
50	1ser_T_C61_C62	AAA	AA00	59	0.24	AA00
51	1ser_T_C62_C63	AAA	AA00	78	0.16	AA00
52	1ser_T_C63_G64	AAA	AA00	84	0.15	AA00
53	1ser_T_G64_C65	AAA	AA00	84	0.17	AA00
54	1ser_T_C65_C66	AAA	AA00	83	0.17	AA00
55	1ser_T_C66_C67	AAA	AA08	49	0.17	AA08
56	1ser_T_C67_U68	AAw	AA01	25	0.35	AA01
57	1ser_T_U68_C69	AAA	AA08	71	0.22	AA08
58	1ser_T_C69_U70	AAA	AA00	79	0.20	AA00
59	1ser_T_U70_C71	AAA	AA08	79	0.31	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 59 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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