DNATCO v4.1: results

Crystal structure of DNA polymerase lambda complexed with a two nucleotide gap DNA molecule

Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1rzt_B_DC1_DG2	BBB	BB00	82	0.31	BB00
02	1rzt_B_DG2_DG3	BBB	BB00	88	0.21	BB00
03	1rzt_B_DG3_DC4	BBB	BB00	21	0.37	BB00
04	1rzt_B_DC4_DA5	NAN	NANT	0	1.38	OP21
05	1rzt_B_DA5_DA6	BBB	BB00	74	0.23	BB00
06	1rzt_B_DA6_DC7	BBB	BB00	66	0.23	BB00
07	1rzt_B_DC7_DG8	BBB	BB00	61	0.42	BB00
08	1rzt_B_DG8_DC9	BBB	BB00	72	0.22	BB00
09	1rzt_B_DC9_DA10	BBB	BB00	83	0.29	BB00
10	1rzt_B_DA10_DC11	BBw	BB02	56	0.21	BB02
11	1rzt_C_DG1_DT2	BBB	BB00	51	0.35	BB00
12	1rzt_C_DT2_DG3	BBB	BB00	87	0.18	BB00
13	1rzt_C_DG3_DC4	BBB	BB01	85	0.16	BB01
14	1rzt_C_DC4_DG5	BBB	BB00	62	0.27	BB00
15	1rzt_D_DG1_DC2	BBw	BB16	53	0.62	BB16
16	1rzt_D_DC2_DC3	BBB	BB00	94	0.13	BB00
17	1rzt_D_DC3_DG4	BBB	BB00	34	0.33	BB00
18	1rzt_F_DC1_DG2	BBB	BB00	75	0.34	BB00
19	1rzt_F_DG2_DG3	BBB	BB00	96	0.16	BB00
20	1rzt_F_DG3_DC4	BBB	BB00	38	0.40	BB00
21	1rzt_F_DC4_DA5	NAN	NANT	0	1.35	OP21
22	1rzt_F_DA5_DA6	BBB	BB00	79	0.21	BB00
23	1rzt_F_DA6_DC7	BBB	BB00	85	0.21	BB00
24	1rzt_F_DC7_DG8	B12	BB04	87	0.24	BB04
25	1rzt_F_DG8_DC9	BBB	BB00	91	0.14	BB00
26	1rzt_F_DC9_DA10	B12	BB04	92	0.21	BB04
27	1rzt_F_DA10_DC11	BBw	BB02	74	0.17	BB02
28	1rzt_G_DG1_DT2	BBB	BB00	56	0.35	BB00
29	1rzt_G_DT2_DG3	BBB	BB00	92	0.17	BB00
30	1rzt_G_DG3_DC4	BBB	BB00	88	0.21	BB00
31	1rzt_G_DC4_DG5	BBB	BB00	84	0.23	BB00
32	1rzt_H_DG1_DC2	BBB	BB00	77	0.25	BB00
33	1rzt_H_DC2_DC3	BBB	BB00	96	0.07	BB00
34	1rzt_H_DC3_DG4	BBB	BB00	58	0.37	BB00
35	1rzt_J_DC1_DG2	BBB	BB00	78	0.30	BB00
36	1rzt_J_DG2_DG3	BBB	BB00	92	0.23	BB00
37	1rzt_J_DG3_DC4	BBB	BB00	32	0.36	BB00
38	1rzt_J_DC4_DA5	NAN	NANT	0	1.33	OP21
39	1rzt_J_DA5_DA6	BBB	BB00	88	0.15	BB00
40	1rzt_J_DA6_DC7	BBB	BB00	81	0.27	BB00
41	1rzt_J_DC7_DG8	B12	BB04	91	0.20	BB04
42	1rzt_J_DG8_DC9	BBB	BB00	88	0.14	BB00
43	1rzt_J_DC9_DA10	B12	BB04	91	0.23	BB04
44	1rzt_J_DA10_DC11	BBw	BB02	62	0.19	BB02
45	1rzt_K_DG1_DT2	BBB	BB00	54	0.30	BB00
46	1rzt_K_DT2_DG3	BBB	BB00	95	0.12	BB00
47	1rzt_K_DG3_DC4	BBB	BB00	67	0.21	BB00
48	1rzt_K_DC4_DG5	BBB	BB00	74	0.28	BB00
49	1rzt_L_DG1_DC2	BBB	BB00	69	0.28	BB00
50	1rzt_L_DC2_DC3	BBB	BB00	95	0.10	BB00
51	1rzt_L_DC3_DG4	B12	BB04	43	0.31	BB04
52	1rzt_N_DC1_DG2	BBB	BB00	86	0.28	BB00
53	1rzt_N_DG2_DG3	BBB	BB00	79	0.29	BB00
54	1rzt_N_DG3_DC4	BBB	BB00	24	0.35	BB00
55	1rzt_N_DC4_DA5	NAN	NANT	0	1.31	OP21
56	1rzt_N_DA5_DA6	BBB	BB00	74	0.23	BB00
57	1rzt_N_DA6_DC7	BBB	BB00	64	0.24	BB00
58	1rzt_N_DC7_DG8	B12	BB04	58	0.22	BB04
59	1rzt_N_DG8_DC9	BBB	BB00	85	0.18	BB00
60	1rzt_N_DC9_DA10	BBB	BB00	64	0.38	BB00
61	1rzt_N_DA10_DC11	BBw	BB02	55	0.15	BB02
62	1rzt_O_DG1_DT2	BBB	BB00	53	0.33	BB00
63	1rzt_O_DT2_DG3	BBB	BB00	96	0.11	BB00
64	1rzt_O_DG3_DC4	BBB	BB01	85	0.15	BB01
65	1rzt_O_DC4_DG5	BBB	BB00	53	0.22	BB00
66	1rzt_P_DG1_DC2	AAA	AA00	64	0.27	AA00
67	1rzt_P_DC2_DC3	AAA	AA00	48	0.40	AA00
68	1rzt_P_DC3_DG4	NAN	NANT	0	0.43	AA02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 68 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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