Conformers:
ABBIImiBZICOPNSYNN
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Crystal structure of RNase III Mutant E110K from Aquifex Aeolicus complexed with ds-RNA at 2.15 Angstrom Resolution
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 36 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 1rc7_B_G1_G2 | AAA | AA00 | 86 | 0.13 |
| 02 | 1rc7_B_G2_C3 | AAA | AA00 | 91 | 0.15 |
| 03 | 1rc7_B_C3_G4 | AAw | AA01 | 93 | 0.12 |
| 04 | 1rc7_B_G4_C5 | AAA | AA00 | 82 | 0.15 |
| 05 | 1rc7_B_C5_G6 | AAA | AA00 | 88 | 0.13 |
| 06 | 1rc7_B_G6_C7 | AAA | AA00 | 84 | 0.21 |
| 07 | 1rc7_B_C7_G8 | AAA | AA00 | 87 | 0.16 |
| 08 | 1rc7_B_G8_C9 | AAA | AA00 | 91 | 0.17 |
| 09 | 1rc7_B_C9_C10 | AAA | AA00 | 84 | 0.19 |
| 10 | 1rc7_C_G11_G12 | AAA | AA00 | 68 | 0.25 |
| 11 | 1rc7_C_G12_C13 | AAw | AA01 | 98 | 0.16 |
| 12 | 1rc7_C_C13_G14 | AAA | AA00 | 83 | 0.17 |
| 13 | 1rc7_C_G14_C15 | AAA | AA00 | 90 | 0.13 |
| 14 | 1rc7_C_C15_G16 | AAA | AA00 | 88 | 0.14 |
| 15 | 1rc7_C_G16_C17 | AAA | AA00 | 93 | 0.18 |
| 16 | 1rc7_C_C17_G18 | AAA | AA00 | 94 | 0.14 |
| 17 | 1rc7_C_G18_C19 | AAA | AA00 | 97 | 0.08 |
| 18 | 1rc7_C_C19_C20 | AAA | AA00 | 91 | 0.13 |
| 19 | 1rc7_D_G21_G22 | AAA | AA00 | 73 | 0.23 |
| 20 | 1rc7_D_G22_C23 | AAA | AA00 | 95 | 0.13 |
| 21 | 1rc7_D_C23_G24 | AAA | AA00 | 90 | 0.22 |
| 22 | 1rc7_D_G24_C25 | AAA | AA00 | 65 | 0.23 |
| 23 | 1rc7_D_C25_G26 | AAA | AA00 | 88 | 0.12 |
| 24 | 1rc7_D_G26_C27 | AAA | AA00 | 95 | 0.10 |
| 25 | 1rc7_D_C27_G28 | AAA | AA00 | 87 | 0.15 |
| 26 | 1rc7_D_G28_C29 | AAA | AA00 | 95 | 0.11 |
| 27 | 1rc7_D_C29_C30 | AAA | AA00 | 90 | 0.12 |
| 28 | 1rc7_E_G31_G32 | AAA | AA00 | 89 | 0.12 |
| 29 | 1rc7_E_G32_C33 | AAA | AA00 | 81 | 0.17 |
| 30 | 1rc7_E_C33_G34 | AAA | AA00 | 91 | 0.19 |
| 31 | 1rc7_E_G34_C35 | AAA | AA00 | 94 | 0.12 |
| 32 | 1rc7_E_C35_G36 | AAA | AA00 | 92 | 0.12 |
| 33 | 1rc7_E_G36_C37 | AAA | AA00 | 80 | 0.18 |
| 34 | 1rc7_E_C37_G38 | AAA | AA00 | 85 | 0.21 |
| 35 | 1rc7_E_G38_C39 | AAA | AA00 | 95 | 0.08 |
| 36 | 1rc7_E_C39_C40 | AAA | AA00 | 89 | 0.18 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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