DNATCO v4.1: results

INTRAMOLECULAR DNA TRIPLEX WITH RNA THIRD STRAND, NMR, 10 STRUCTURES

Results of the assignment of 210 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1r3x-m10_A_DA1_DG2	BBB	BB00	44	0.34	BB00
002	1r3x-m1_A_DA1_DG2	A-B	AB01	36	0.49	AB01
003	1r3x-m2_A_DA1_DG2	NAN	NANT	0	0.47	BB02
004	1r3x-m3_A_DA1_DG2	NAN	NANT	0	0.91	AB02
005	1r3x-m4_A_DA1_DG2	BBB	BB00	62	0.28	BB00
006	1r3x-m5_A_DA1_DG2	A-B	AB01	70	0.44	AB01
007	1r3x-m6_A_DA1_DG2	BBw	BB03	22	0.35	BB03
008	1r3x-m7_A_DA1_DG2	A-B	AB01	45	0.51	AB01
009	1r3x-m8_A_DA1_DG2	BBB	BB00	34	0.39	BB00
010	1r3x-m9_A_DA1_DG2	A-B	AB01	55	0.45	AB01
011	1r3x-m10_A_DG2_DA3	NAN	NANT	0	0.61	AB02
012	1r3x-m1_A_DG2_DA3	NAN	NANT	0	0.56	BA16
013	1r3x-m2_A_DG2_DA3	NAN	NANT	0	0.92	BB07
014	1r3x-m3_A_DG2_DA3	NAN	NANT	0	0.52	BA17
015	1r3x-m4_A_DG2_DA3	NAN	NANT	0	0.59	BA08
016	1r3x-m5_A_DG2_DA3	NAN	NANT	0	0.49	BA08
017	1r3x-m6_A_DG2_DA3	NAN	NANT	0	0.69	BA08
018	1r3x-m7_A_DG2_DA3	NAN	NANT	0	0.85	BB07
019	1r3x-m8_A_DG2_DA3	NAN	NANT	0	0.85	BB07
020	1r3x-m9_A_DG2_DA3	B-A	BA05	10	0.46	BA05
021	1r3x-m10_A_DA3_DG4	NAN	NANT	0	0.56	BB08
022	1r3x-m1_A_DA3_DG4	NAN	NANT	0	0.70	BA17
023	1r3x-m2_A_DA3_DG4	NAN	NANT	0	0.45	BA17
024	1r3x-m3_A_DA3_DG4	NAN	NANT	0	0.65	BA16
025	1r3x-m4_A_DA3_DG4	NAN	NANT	0	0.51	BB16
026	1r3x-m5_A_DA3_DG4	NAN	NANT	0	0.87	BA16
027	1r3x-m6_A_DA3_DG4	NAN	NANT	0	0.45	BA17
028	1r3x-m7_A_DA3_DG4	NAN	NANT	0	0.58	BB08
029	1r3x-m8_A_DA3_DG4	NAN	NANT	0	0.63	BA16
030	1r3x-m9_A_DA3_DG4	NAN	NANT	0	1.43	OP24
031	1r3x-m10_A_DG4_DA5	NAN	NANT	0	0.34	BB01
032	1r3x-m1_A_DG4_DA5	NAN	NANT	0	1.36	OP24
033	1r3x-m2_A_DG4_DA5	NAN	NANT	0	0.56	AA00
034	1r3x-m3_A_DG4_DA5	NAN	NANT	0	0.50	AA00
035	1r3x-m4_A_DG4_DA5	NAN	NANT	0	1.40	OP24
036	1r3x-m5_A_DG4_DA5	NAN	NANT	0	1.37	OP24
037	1r3x-m6_A_DG4_DA5	B-A	BA05	16	0.30	BA05
038	1r3x-m7_A_DG4_DA5	NAN	NANT	0	1.52	OP24
039	1r3x-m8_A_DG4_DA5	NAN	NANT	0	0.49	AA00
040	1r3x-m9_A_DG4_DA5	NAN	NANT	0	0.34	BB01
041	1r3x-m10_A_DA5_DG6	BBw	BB16	18	0.82	BB16
042	1r3x-m1_A_DA5_DG6	A-B	AB01	11	0.41	AB01
043	1r3x-m2_A_DA5_DG6	A-B	AB03	41	0.34	AB03
044	1r3x-m3_A_DA5_DG6	NAN	NANT	0	0.80	BB07
045	1r3x-m4_A_DA5_DG6	NAN	NANT	0	0.96	BB07
046	1r3x-m5_A_DA5_DG6	NAN	NANT	0	0.88	BB07
047	1r3x-m6_A_DA5_DG6	NAN	NANT	0	0.81	BA17
048	1r3x-m7_A_DA5_DG6	NAN	NANT	0	0.84	BB07
049	1r3x-m8_A_DA5_DG6	NAN	NANT	0	0.85	BB07
050	1r3x-m9_A_DA5_DG6	NAN	NANT	0	0.90	BB07
051	1r3x-m10_A_DG6_DA7	NAN	NANT	0	0.43	BA05
052	1r3x-m1_A_DG6_DA7	B-A	BA05	20	0.41	BA05
053	1r3x-m2_A_DG6_DA7	B-A	BA05	28	0.40	BA05
054	1r3x-m3_A_DG6_DA7	B-A	BA05	16	0.46	BA05
055	1r3x-m4_A_DG6_DA7	B-A	BA17	36	0.46	BA17
056	1r3x-m5_A_DG6_DA7	B-A	BA01	11	0.42	BA01
057	1r3x-m6_A_DG6_DA7	NAN	NANT	0	1.19	OP24
058	1r3x-m7_A_DG6_DA7	NAN	NANT	0	1.06	BB07
059	1r3x-m8_A_DG6_DA7	NAN	NANT	0	1.31	OP24
060	1r3x-m9_A_DG6_DA7	B-A	BA08	44	0.58	BA08
061	1r3x-m10_A_DA7_DA8	NAN	NANT	0	0.43	AB04
062	1r3x-m1_A_DA7_DA8	NAN	NANT	0	0.57	AB04
063	1r3x-m2_A_DA7_DA8	NAN	NANT	0	0.59	AA04
064	1r3x-m3_A_DA7_DA8	NAN	NANT	0	0.56	AB04
065	1r3x-m4_A_DA7_DA8	NAN	NANT	0	0.53	AB04
066	1r3x-m5_A_DA7_DA8	NAN	NANT	0	0.59	AB04
067	1r3x-m6_A_DA7_DA8	NAN	NANT	0	0.50	AB04
068	1r3x-m7_A_DA7_DA8	NAN	NANT	0	0.59	AB02
069	1r3x-m8_A_DA7_DA8	NAN	NANT	0	0.55	AB04
070	1r3x-m9_A_DA7_DA8	NAN	NANT	0	0.53	AB04
071	1r3x-m10_B_DT9_DT10	B-A	BA05	25	0.26	BA05
072	1r3x-m1_B_DT9_DT10	B-A	BA05	30	0.26	BA05
073	1r3x-m2_B_DT9_DT10	B-A	BA05	22	0.29	BA05
074	1r3x-m3_B_DT9_DT10	B-A	BA05	23	0.29	BA05
075	1r3x-m4_B_DT9_DT10	B-A	BA05	35	0.26	BA05
076	1r3x-m5_B_DT9_DT10	B-A	BA05	26	0.31	BA05
077	1r3x-m6_B_DT9_DT10	B-A	BA05	21	0.30	BA05
078	1r3x-m7_B_DT9_DT10	B-A	BA05	15	0.31	BA05
079	1r3x-m8_B_DT9_DT10	B-A	BA05	15	0.35	BA05
080	1r3x-m9_B_DT9_DT10	B-A	BA05	43	0.22	BA05
081	1r3x-m10_B_DT10_DC11	NAN	NANT	0	1.27	OP24
082	1r3x-m1_B_DT10_DC11	NAN	NANT	0	0.77	AB02
083	1r3x-m2_B_DT10_DC11	NAN	NANT	0	1.23	OP24
084	1r3x-m3_B_DT10_DC11	NAN	NANT	0	0.80	AB02
085	1r3x-m4_B_DT10_DC11	NAN	NANT	0	1.26	OP24
086	1r3x-m5_B_DT10_DC11	NAN	NANT	0	1.36	OP24
087	1r3x-m6_B_DT10_DC11	NAN	NANT	0	1.23	OP24
088	1r3x-m7_B_DT10_DC11	NAN	NANT	0	1.25	OP24
089	1r3x-m8_B_DT10_DC11	NAN	NANT	0	1.26	OP24
090	1r3x-m9_B_DT10_DC11	NAN	NANT	0	0.96	BA17
091	1r3x-m10_B_DC11_DT12	NAN	NANT	0	0.65	AA04
092	1r3x-m1_B_DC11_DT12	NAN	NANT	0	0.65	AA04
093	1r3x-m2_B_DC11_DT12	NAN	NANT	0	0.63	AA04
094	1r3x-m3_B_DC11_DT12	NAN	NANT	0	0.64	AB01
095	1r3x-m4_B_DC11_DT12	NAN	NANT	0	0.60	AA04
096	1r3x-m5_B_DC11_DT12	NAN	NANT	0	0.49	AB02
097	1r3x-m6_B_DC11_DT12	NAN	NANT	0	0.55	AA00
098	1r3x-m7_B_DC11_DT12	NAN	NANT	0	0.49	AB04
099	1r3x-m8_B_DC11_DT12	NAN	NANT	0	0.56	AB04
100	1r3x-m9_B_DC11_DT12	NAN	NANT	0	0.85	AA02
101	1r3x-m10_B_DT12_DC13	NAN	NANT	0	0.58	AB02
102	1r3x-m1_B_DT12_DC13	NAN	NANT	0	0.57	AB02
103	1r3x-m2_B_DT12_DC13	NAN	NANT	0	0.64	AB02
104	1r3x-m3_B_DT12_DC13	NAN	NANT	0	0.78	AB02
105	1r3x-m4_B_DT12_DC13	NAN	NANT	0	1.14	OP24
106	1r3x-m5_B_DT12_DC13	NAN	NANT	0	0.85	BA17
107	1r3x-m6_B_DT12_DC13	NAN	NANT	0	0.92	BB07
108	1r3x-m7_B_DT12_DC13	NAN	NANT	0	0.86	BA17
109	1r3x-m8_B_DT12_DC13	NAN	NANT	0	0.71	AB02
110	1r3x-m9_B_DT12_DC13	NAN	NANT	0	0.54	AB02
111	1r3x-m10_B_DC13_DT14	BBB	BB01	14	0.34	BB01
112	1r3x-m1_B_DC13_DT14	B-A	BA05	14	0.47	BA05
113	1r3x-m2_B_DC13_DT14	NAN	NANT	0	0.48	AB02
114	1r3x-m3_B_DC13_DT14	NAN	NANT	0	0.99	OP24
115	1r3x-m4_B_DC13_DT14	B-A	BA05	14	0.29	BA05
116	1r3x-m5_B_DC13_DT14	NAN	NANT	0	0.55	BA05
117	1r3x-m6_B_DC13_DT14	NAN	NANT	0	0.34	BB03
118	1r3x-m7_B_DC13_DT14	NAN	NANT	0	0.53	BA05
119	1r3x-m8_B_DC13_DT14	NAN	NANT	0	0.52	BA05
120	1r3x-m9_B_DC13_DT14	B-A	BA05	17	0.46	BA05
121	1r3x-m10_B_DT14_DC15	NAN	NANT	0	1.61	OP24
122	1r3x-m1_B_DT14_DC15	NAN	NANT	0	0.75	AA04
123	1r3x-m2_B_DT14_DC15	NAN	NANT	0	0.64	AA04
124	1r3x-m3_B_DT14_DC15	NAN	NANT	0	0.59	AA01
125	1r3x-m4_B_DT14_DC15	NAN	NANT	0	0.61	AA00
126	1r3x-m5_B_DT14_DC15	NAN	NANT	0	0.55	AA01
127	1r3x-m6_B_DT14_DC15	NAN	NANT	0	0.70	BB02
128	1r3x-m7_B_DT14_DC15	NAN	NANT	0	0.83	AA02
129	1r3x-m8_B_DT14_DC15	NAN	NANT	0	0.61	AB04
130	1r3x-m9_B_DT14_DC15	NAN	NANT	0	0.66	AA04
131	1r3x-m10_B_DC15_DT16	NAN	NANT	0	0.27	BB03
132	1r3x-m1_B_DC15_DT16	NAN	NANT	0	0.33	BB03
133	1r3x-m2_B_DC15_DT16	NAN	NANT	0	0.59	AA02
134	1r3x-m3_B_DC15_DT16	NAN	NANT	0	0.64	AA02
135	1r3x-m4_B_DC15_DT16	NAN	NANT	0	0.62	AA02
136	1r3x-m5_B_DC15_DT16	BBB	BB00	22	0.38	BB00
137	1r3x-m6_B_DC15_DT16	BBB	BB01	25	0.27	BB01
138	1r3x-m7_B_DC15_DT16	NAN	NANT	0	0.32	BB03
139	1r3x-m8_B_DC15_DT16	NAN	NANT	0	0.77	BA17
140	1r3x-m9_B_DC15_DT16	NAN	NANT	0	0.34	BB03
141	1r3x-m10_C_U17_C18	NAN	NANT	0	1.14	BB07
142	1r3x-m1_C_U17_C18	NAN	NANT	0	1.19	BB07
143	1r3x-m2_C_U17_C18	NAN	NANT	0	1.17	BB07
144	1r3x-m3_C_U17_C18	NAN	NANT	0	1.11	BB07
145	1r3x-m4_C_U17_C18	NAN	NANT	0	1.16	BB07
146	1r3x-m5_C_U17_C18	NAN	NANT	0	1.19	AB02
147	1r3x-m6_C_U17_C18	NAN	NANT	0	1.17	BB07
148	1r3x-m7_C_U17_C18	NAN	NANT	0	1.15	AB02
149	1r3x-m8_C_U17_C18	NAN	NANT	0	1.10	BB07
150	1r3x-m9_C_U17_C18	NAN	NANT	0	1.05	BA17
151	1r3x-m10_C_C18_U19	NAN	NANT	0	0.78	BA05
152	1r3x-m1_C_C18_U19	NAN	NANT	0	0.79	AA01
153	1r3x-m2_C_C18_U19	NAN	NANT	0	0.74	BB01
154	1r3x-m3_C_C18_U19	NAN	NANT	0	0.76	BA05
155	1r3x-m4_C_C18_U19	NAN	NANT	0	0.65	BB00
156	1r3x-m5_C_C18_U19	NAN	NANT	0	1.03	BB03
157	1r3x-m6_C_C18_U19	NAN	NANT	0	0.71	BA05
158	1r3x-m7_C_C18_U19	NAN	NANT	0	0.82	BB01
159	1r3x-m8_C_C18_U19	NAN	NANT	0	0.81	BB01
160	1r3x-m9_C_C18_U19	NAN	NANT	0	0.85	BB03
161	1r3x-m10_C_U19_C20	NAN	NANT	0	0.46	AA01
162	1r3x-m1_C_U19_C20	NAN	NANT	0	0.55	BB03
163	1r3x-m2_C_U19_C20	NAN	NANT	0	0.46	AA01
164	1r3x-m3_C_U19_C20	A-B	AB01	11	0.47	AB01
165	1r3x-m4_C_U19_C20	NAN	NANT	0	0.47	BB03
166	1r3x-m5_C_U19_C20	NAN	NANT	0	0.61	BA10
167	1r3x-m6_C_U19_C20	NAN	NANT	0	0.48	AA01
168	1r3x-m7_C_U19_C20	NAN	NANT	0	0.45	BB03
169	1r3x-m8_C_U19_C20	BBB	BB01	27	0.42	BB01
170	1r3x-m9_C_U19_C20	BBw	BB03	85	0.29	BB03
171	1r3x-m10_C_C20_U21	AAw	AA01	74	0.43	AA01
172	1r3x-m1_C_C20_U21	NAN	NANT	0	0.72	BA10
173	1r3x-m2_C_C20_U21	NAN	NANT	0	0.61	AA01
174	1r3x-m3_C_C20_U21	NAN	NANT	0	0.60	BA13
175	1r3x-m4_C_C20_U21	NAN	NANT	0	0.55	AA00
176	1r3x-m5_C_C20_U21	NAN	NANT	0	0.59	AA06
177	1r3x-m6_C_C20_U21	NAN	NANT	0	0.48	AA01
178	1r3x-m7_C_C20_U21	NAN	NANT	0	0.65	AA01
179	1r3x-m8_C_C20_U21	NAN	NANT	0	0.56	BA08
180	1r3x-m9_C_C20_U21	NAN	NANT	0	0.66	BA10
181	1r3x-m10_C_U21_C22	AAA	AA00	39	0.47	AA00
182	1r3x-m1_C_U21_C22	AAw	AA01	67	0.26	AA01
183	1r3x-m2_C_U21_C22	AAw	AA01	21	0.47	AA01
184	1r3x-m3_C_U21_C22	AAw	AA01	77	0.27	AA01
185	1r3x-m4_C_U21_C22	AAA	AA00	50	0.35	AA00
186	1r3x-m5_C_U21_C22	AAw	AA01	79	0.31	AA01
187	1r3x-m6_C_U21_C22	AAw	AA01	85	0.25	AA01
188	1r3x-m7_C_U21_C22	NAN	NANT	0	0.46	AA01
189	1r3x-m8_C_U21_C22	AAA	AA00	45	0.51	AA00
190	1r3x-m9_C_U21_C22	AAw	AA01	46	0.32	AA01
191	1r3x-m10_C_C22_U23	A-B	AB05	39	0.35	AB05
192	1r3x-m1_C_C22_U23	NAN	NANT	0	0.55	AA11
193	1r3x-m2_C_C22_U23	NAN	NANT	0	0.98	AB02
194	1r3x-m3_C_C22_U23	NAN	NANT	0	0.63	AA08
195	1r3x-m4_C_C22_U23	NAN	NANT	0	1.06	OP24
196	1r3x-m5_C_C22_U23	NAN	NANT	0	0.59	AA01
197	1r3x-m6_C_C22_U23	NAN	NANT	0	0.66	AA11
198	1r3x-m7_C_C22_U23	NAN	NANT	0	0.88	BB02
199	1r3x-m8_C_C22_U23	NAN	NANT	0	0.47	AB05
200	1r3x-m9_C_C22_U23	NAN	NANT	0	0.49	AA11
201	1r3x-m10_C_U23_U24	BBw	BB03	60	0.41	BB03
202	1r3x-m1_C_U23_U24	NAN	NANT	0	0.65	BB16
203	1r3x-m2_C_U23_U24	NAN	NANT	0	0.97	BB07
204	1r3x-m3_C_U23_U24	BBB	BB00	15	0.57	BB00
205	1r3x-m4_C_U23_U24	NAN	NANT	0	0.73	BB16
206	1r3x-m5_C_U23_U24	BBw	BB16	46	0.57	BB16
207	1r3x-m6_C_U23_U24	NAN	NANT	0	0.54	BB17
208	1r3x-m7_C_U23_U24	NAN	NANT	0	1.10	BB07
209	1r3x-m8_C_U23_U24	NAN	NANT	0	0.75	BB02
210	1r3x-m9_C_U23_U24	NAN	NANT	0	1.13	BB17

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Z

N

Results of the assignment of 210 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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