DNATCO v4.1: results

INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN

Results of the assignment of 74 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1qu3_T_G1_G2	NAN	NANT	0	0.63	AA04
02	1qu3_T_G2_G3	AAA	AA00	15	0.29	AA00
03	1qu3_T_G3_C4	AAA	AA00	76	0.20	AA00
04	1qu3_T_C4_U5	AAA	AA00	64	0.38	AA00
05	1qu3_T_U5_U6	AAA	AA00	62	0.30	AA00
06	1qu3_T_U6_G7	AAA	AA00	47	0.20	AA00
07	1qu3_T_G7_U8	NAN	NANT	0	1.66	OP16
08	1qu3_T_U8_A9	NAN	NANT	0	0.64	IC07
09	1qu3_T_A9_G10	NAN	NANT	0	1.28	OP07
10	1qu3_T_G10_C11	AAA	AA00	52	0.26	AA00
11	1qu3_T_C11_U12	AAA	AA00	75	0.18	AA00
12	1qu3_T_U12_C13	AAw	AA01	79	0.23	AA01
13	1qu3_T_C13_A14	NAN	NANT	0	0.75	IC03
14	1qu3_T_A14_G15	AAw	AA05	62	0.24	AA05
15	1qu3_T_G15_G16	NAN	NANT	0	1.50	OP17
16	1qu3_T_G16_U17	NAN	NANT	0	0.92	AA05
17	1qu3_T_U17_G18	NAN	NANT	0	1.52	OP06
18	1qu3_T_G18_G19	NAN	NANT	0	1.05	AB02
19	1qu3_T_G19_U20	NAN	NANT	0	1.86	OP31
20	1qu3_T_U20_U121.A	NAN	NANT	0	0.68	ZZ01
21	1qu3_T_A21_G22	NAN	NANT	0	0.83	AA11
22	1qu3_T_G22_A23	AAA	AA00	34	0.33	AA00
23	1qu3_T_A23_G24	AAA	AA08	78	0.31	AA08
24	1qu3_T_G24_C25	AAA	AA08	70	0.30	AA08
25	1qu3_T_C25_G26	AAA	AA00	44	0.45	AA00
26	1qu3_T_G26_C27	AAA	AA00	71	0.32	AA00
27	1qu3_T_C27_A28	AAA	AA00	83	0.23	AA00
28	1qu3_T_A28_C29	AAA	AA00	76	0.20	AA00
29	1qu3_T_C29_C30	AAA	AA00	83	0.20	AA00
30	1qu3_T_C30_C31	AAA	AA00	79	0.21	AA00
31	1qu3_T_C31_C32	AAA	AA00	59	0.19	AA00
32	1qu3_T_C32_U33	NAN	NANT	0	0.34	AA08
33	1qu3_T_U33_G34	NAN	NANT	0	1.84	OP05
34	1qu3_T_G34_A35	NAN	NANT	0	1.53	OP31
35	1qu3_T_A35_U36	NAN	NANT	0	1.67	OP01
36	1qu3_T_U36_A37	NAN	NANT	0	1.00	OP21
37	1qu3_T_A37_A38	NAN	NANT	0	1.76	OP17
38	1qu3_T_A38_G39	AAA	AA00	41	0.52	AA00
39	1qu3_T_G39_G40	AAA	AA00	62	0.19	AA00
40	1qu3_T_G40_G41	AAA	AA00	75	0.17	AA00
41	1qu3_T_G41_U42	AAA	AA00	85	0.15	AA00
42	1qu3_T_U42_G43	AAA	AA00	76	0.24	AA00
43	1qu3_T_G43_A44	AAA	AA00	50	0.31	AA00
44	1qu3_T_A44_G45	NAN	NANT	0	0.90	IC04
45	1qu3_T_G45_G46	NAN	NANT	0	0.61	IC03
46	1qu3_T_G46_U47	NAN	NANT	0	1.13	OP12
47	1qu3_T_U47_C48	NAN	NANT	0	1.68	BB10
48	1qu3_T_C48_G49	NAN	NANT	0	1.67	OP06
49	1qu3_T_G49_G50	AAA	AA00	51	0.22	AA00
50	1qu3_T_G50_U51	AAA	AA00	61	0.19	AA00
51	1qu3_T_U51_G52	AAA	AA00	70	0.24	AA00
52	1qu3_T_G52_G53	AAw	AA01	78	0.17	AA01
53	1qu3_T_G53_U54	AAA	AA00	40	0.29	AA00
54	1qu3_T_U54_U55	AAA	AA08	74	0.29	AA08
55	1qu3_T_U55_C56	OPN	OP04	78	0.17	OP04
56	1qu3_T_C56_A57	AAA	AA00	61	0.36	AA00
57	1qu3_T_A57_A58	NAN	NANT	0	0.44	IC01
58	1qu3_T_A58_G59	NAN	NANT	0	1.52	OP05
59	1qu3_T_G59_U60	NAN	NANT	0	0.61	AA00
60	1qu3_T_U60_C61	NAN	NANT	0	1.97	OP15
61	1qu3_T_C61_C62	AAA	AA00	41	0.30	AA00
62	1qu3_T_C62_A63	AAA	AA00	94	0.13	AA00
63	1qu3_T_A63_C64	AAA	AA00	50	0.26	AA00
64	1qu3_T_C64_U65	AAA	AA00	94	0.17	AA00
65	1qu3_T_U65_C66	AAA	AA00	32	0.31	AA00
66	1qu3_T_C66_A67	AAA	AA00	81	0.29	AA00
67	1qu3_T_A67_G68	AAw	AA10	47	0.24	AA10
68	1qu3_T_G68_G69	AAA	AA00	67	0.31	AA00
69	1qu3_T_G69_C70	AAA	AA00	63	0.25	AA00
70	1qu3_T_C70_C71	AAA	AA00	40	0.23	AA00
71	1qu3_T_C71_C72	AAw	AA01	61	0.34	AA01
72	1qu3_T_C72_A73	AAA	AA00	22	0.39	AA00
73	1qu3_T_A73_C74	NAN	NANT	0	0.74	AA04
74	1qu3_T_U121.A_A21	NAN	NANT	0	0.53	OP13

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 74 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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