DNATCO v4.1: results

INSIGHTS INTO EDITING FROM AN ILE-TRNA SYNTHETASE STRUCTURE WITH TRNA(ILE) AND MUPIROCIN

Results of the assignment of 74 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1qu2_T_G1_G2	AAA	AA00	35	0.30	AA00
02	1qu2_T_G2_G3	AAA	AA00	74	0.22	AA00
03	1qu2_T_G3_C4	AAA	AA08	87	0.15	AA08
04	1qu2_T_C4_U5	AAA	AA00	72	0.28	AA00
05	1qu2_T_U5_U6	AAA	AA00	47	0.33	AA00
06	1qu2_T_U6_G7	NAN	NANT	0	0.51	AB04
07	1qu2_T_G7_U8	NAN	NANT	0	0.51	OP11
08	1qu2_T_U8_A9	NAN	NANT	0	0.59	IC07
09	1qu2_T_A9_G10	NAN	NANT	0	1.29	OP07
10	1qu2_T_G10_C11	AAA	AA00	21	0.32	AA00
11	1qu2_T_C11_U12	AAA	AA00	87	0.08	AA00
12	1qu2_T_U12_C13	AAw	AA01	90	0.18	AA01
13	1qu2_T_C13_A14	NAN	NANT	0	0.77	IC03
14	1qu2_T_A14_G15	AAw	AA05	57	0.28	AA05
15	1qu2_T_G15_G16	NAN	NANT	0	2.11	OP21
16	1qu2_T_G16_U17	NAN	NANT	0	1.16	AA05
17	1qu2_T_U17_G18	NAN	NANT	0	1.51	OP06
18	1qu2_T_G18_G19	NAN	NANT	0	1.16	AB02
19	1qu2_T_G19_U20	NAN	NANT	0	1.89	OP31
20	1qu2_T_U20_U21	NAN	NANT	0	0.70	ZZ01
21	1qu2_T_A21.A_G22	NAN	NANT	0	0.96	AA11
22	1qu2_T_U21_A21.A	NAN	NANT	0	0.48	OP13
23	1qu2_T_G22_A23	AAA	AA03	71	0.22	AA03
24	1qu2_T_A23_G24	AAA	AA08	86	0.26	AA08
25	1qu2_T_G24_C25	AAA	AA08	79	0.25	AA08
26	1qu2_T_C25_G26	AAA	AA00	63	0.38	AA00
27	1qu2_T_G26_C27	AAA	AA00	75	0.29	AA00
28	1qu2_T_C27_A28	AAA	AA00	84	0.17	AA00
29	1qu2_T_A28_C29	AAA	AA00	82	0.20	AA00
30	1qu2_T_C29_C30	AAA	AA00	92	0.12	AA00
31	1qu2_T_C30_C31	AAA	AA00	90	0.20	AA00
32	1qu2_T_C31_C32	AAA	AA00	86	0.28	AA00
33	1qu2_T_C32_U33	NAN	NANT	0	0.47	AB04
34	1qu2_T_U33_G34	NAN	NANT	0	0.89	OP21
35	1qu2_T_G34_A35	NAN	NANT	0	1.16	OP30
36	1qu2_T_A35_U36	NAN	NANT	0	2.14	OP15
37	1qu2_T_U36_A37	NAN	NANT	0	1.39	OP16
38	1qu2_T_A37_A38	NAN	NANT	0	1.67	OP17
39	1qu2_T_A38_G39	AAA	AA00	30	0.47	AA00
40	1qu2_T_G39_G40	AAA	AA00	59	0.26	AA00
41	1qu2_T_G40_G41	AAA	AA00	85	0.18	AA00
42	1qu2_T_G41_U42	AAA	AA00	72	0.16	AA00
43	1qu2_T_U42_G43	AAA	AA00	89	0.26	AA00
44	1qu2_T_G43_A44	AAA	AA00	52	0.24	AA00
45	1qu2_T_A44_G45	NAN	NANT	0	0.93	IC04
46	1qu2_T_G45_G46	NAN	NANT	0	0.60	IC03
47	1qu2_T_G46_U47	NAN	NANT	0	1.11	OP12
48	1qu2_T_U47_C48	NAN	NANT	0	1.70	BB10
49	1qu2_T_C48_G49	NAN	NANT	0	1.33	OP05
50	1qu2_T_G49_G50	AAA	AA00	62	0.25	AA00
51	1qu2_T_G50_U51	AAA	AA00	85	0.13	AA00
52	1qu2_T_U51_G52	AAA	AA00	45	0.26	AA00
53	1qu2_T_G52_G53	AAw	AA01	91	0.10	AA01
54	1qu2_T_G53_U54	AAA	AA00	59	0.28	AA00
55	1qu2_T_U54_U55	AAA	AA00	56	0.41	AA00
56	1qu2_T_U55_C56	OPN	OP04	93	0.15	OP04
57	1qu2_T_C56_A57	AAA	AA00	81	0.32	AA00
58	1qu2_T_A57_A58	NAN	NANT	0	0.40	IC02
59	1qu2_T_A58_G59	NAN	NANT	0	1.52	OP05
60	1qu2_T_G59_U60	AAA	AA00	16	0.53	AA00
61	1qu2_T_U60_C61	NAN	NANT	0	1.99	OP15
62	1qu2_T_C61_C62	AAA	AA00	82	0.17	AA00
63	1qu2_T_C62_A63	AAA	AA00	97	0.10	AA00
64	1qu2_T_A63_C64	AAA	AA00	60	0.22	AA00
65	1qu2_T_C64_U65	AAA	AA00	83	0.26	AA00
66	1qu2_T_U65_C66	AAA	AA00	72	0.23	AA00
67	1qu2_T_C66_A67	AAA	AA00	85	0.19	AA00
68	1qu2_T_A67_G68	AAw	AA01	86	0.22	AA01
69	1qu2_T_G68_G69	AAA	AA08	13	0.34	AA08
70	1qu2_T_G69_C70	AAA	AA00	87	0.18	AA00
71	1qu2_T_C70_C71	AAA	AA00	90	0.22	AA00
72	1qu2_T_C71_C72	AAw	AA01	95	0.17	AA01
73	1qu2_T_C72_A73	AAA	AA00	53	0.33	AA00
74	1qu2_T_A73_C74	NAN	NANT	0	1.03	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 74 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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