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Conformers: ABBIImiBZICOPNSYNN
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GLUTAMINYL-TRNA SYNTHETASE MUTANT D235G COMPLEXED WITH GLUTAMINE TRANSFER RNA

Results of the assignment of 73 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011qrt_B_G2_G3AAAAA00770.18 AA00
021qrt_B_G3_G4AAAAA00540.16 AA00
031qrt_B_G4_G5AAwAA01700.17 AA01
041qrt_B_G5_U6AAAAA00700.25 AA00
051qrt_B_U6_A7NANNANT00.47 AA01
061qrt_B_A7_U8NANNANT00.39 OP11
071qrt_B_U8_C9NANNANT01.30 IC04
081qrt_B_C9_G10NANNANT01.28 OP07
091qrt_B_G10_C11AAAAA00520.24 AA00
101qrt_B_C11_C12AAwAA01860.21 AA01
111qrt_B_C12_A13AAAAA08460.51 AA08
121qrt_B_A13_A14AAAAA00320.42 AA00
131qrt_B_A14_G15AAAAA08630.38 AA08
141qrt_B_G15_C16NANNANT01.87 AB02
151qrt_B_C16_G18NANNANT01.67 OP13
161qrt_B_G18_G19NANNANT00.89 BB17
171qrt_B_G19_U20NANNANT00.69 OP26
181qrt_B_U20_A21NANNANT02.05 OP17
191qrt_B_A21_A22NANNANT00.67 IC07
201qrt_B_A22_G23AAAAA08620.49 AA08
211qrt_B_G23_G24AAAAA08810.21 AA08
221qrt_B_G24_C25AAAAA00740.17 AA00
231qrt_B_C25_A26AAAAA00590.40 AA00
241qrt_B_A26_C27AAAAA00730.27 AA00
251qrt_B_C27_C28AAAAA00900.19 AA00
261qrt_B_C28_G29NANNANT00.49 AA10
271qrt_B_G29_G30NANNANT00.39 AA03
281qrt_B_G30_A31AAAAA00470.28 AA00
291qrt_B_A31_U32AAAAA00670.29 AA00
301qrt_B_U32_U33AAAAA00660.33 AA00
311qrt_B_U33_C34OPNOP29220.54 OP29
321qrt_B_C34_U35NANNANT00.65 OP16
331qrt_B_U35_G36NANNANT01.48 OP17
341qrt_B_G36_A37NANNANT00.76 OP11
351qrt_B_A37_U38AAAAA00360.41 AA00
361qrt_B_U38_U39AAAAA00480.36 AA00
371qrt_B_U39_C40AAAAA00330.27 AA00
381qrt_B_C40_C41AAAAA00390.23 AA00
391qrt_B_C41_G42AAAAA08730.31 AA08
401qrt_B_G42_G43AAAAA00400.37 AA00
411qrt_B_G43_C44AAwAA01460.27 AA01
421qrt_B_C44_A45NANNANT01.10 IC02
431qrt_B_A45_U46NANNANT01.45 OP16
441qrt_B_U46_U47NANNANT01.24 OP01
451qrt_B_U47_C48NANNANT00.55 AA12
461qrt_B_C48_C49NANNANT01.41 OP05
471qrt_B_C49_G50AAAAA00660.30 AA00
481qrt_B_G50_A51AAAAA00750.17 AA00
491qrt_B_A51_G52AAwAA01590.26 AA01
501qrt_B_G52_G53AAwAA10490.32 AA10
511qrt_B_G53_U54AAAAA08910.20 AA08
521qrt_B_U54_U55AAAAA00540.31 AA00
531qrt_B_U55_C56OPNOP04630.14 OP04
541qrt_B_C56_G57AAAAA08820.25 AA08
551qrt_B_G57_A58NANNANT00.47 IC01
561qrt_B_A58_A59NANNANT01.11 OP18
571qrt_B_A59_U60AAwAA05190.42 AA05
581qrt_B_U60_C61NANNANT00.46 OP12
591qrt_B_C61_C62AAAAA00720.26 AA00
601qrt_B_C62_U63AAwAA10500.30 AA10
611qrt_B_U63_C64AAAAA03460.43 AA03
621qrt_B_C64_G65AAwAA01630.26 AA01
631qrt_B_G65_U66AAAAA00430.28 AA00
641qrt_B_U66_A67AAAAA00900.12 AA00
651qrt_B_A67_C68AAAAA00820.16 AA00
661qrt_B_C68_C69AAAAA00650.12 AA00
671qrt_B_C69_C70AAAAA00850.17 AA00
681qrt_B_C70_C71AAAAA00650.20 AA00
691qrt_B_C71_A72AAuAA12350.65 AA12
701qrt_B_A72_G73NANNANT00.68 OP31
711qrt_B_G73_C74NANNANT01.08 OP25
721qrt_B_C74_C75NANNANT00.95 OP31
731qrt_B_C75_A76AAAAA08600.38 AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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