DNATCO v4.1: results

STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE COMPLEXED WITH ITS COGNATE TRNA

Results of the assignment of 73 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1qf6_B_G1_C2	AAA	AA00	75	0.19	AA00
02	1qf6_B_C2_C3	AAA	AA00	78	0.23	AA00
03	1qf6_B_C3_G4	AAA	AA00	80	0.18	AA00
04	1qf6_B_G4_A5	AAA	AA00	81	0.17	AA00
05	1qf6_B_A5_U6	AAA	AA00	82	0.20	AA00
06	1qf6_B_U6_A7	NAN	NANT	0	0.39	AA08
07	1qf6_B_A7_U8	NAN	NANT	0	1.57	OP01
08	1qf6_B_U8_A9	NAN	NANT	0	1.06	IC02
09	1qf6_B_A9_G10	NAN	NANT	0	1.19	OP26
10	1qf6_B_G10_C11	AAA	AA00	56	0.21	AA00
11	1qf6_B_C11_U12	AAA	AA00	89	0.14	AA00
12	1qf6_B_U12_C13	AAA	AA04	79	0.42	AA04
13	1qf6_B_C13_A14	AAw	AA01	46	0.53	AA01
14	1qf6_B_A14_G15	AAA	AA08	72	0.42	AA08
15	1qf6_B_G15_H2U16	NAN	NANT	0	1.22	OP31
16	1qf6_B_H2U16_H2U17	NAN	NANT	0	1.20	OP30
17	1qf6_B_H2U17_G18	NAN	NANT	0	0.84	OP13
18	1qf6_B_G18_G19	ICL	IC05	27	0.39	IC05
19	1qf6_B_G19_H2U20	NAN	NANT	0	1.53	OP21
20	1qf6_B_H2U20_A21	NAN	NANT	0	1.32	OP17
21	1qf6_B_A21_G22	NAN	NANT	0	0.92	AB04
22	1qf6_B_G22_A23	NAN	NANT	0	0.52	BA09
23	1qf6_B_A23_G24	AAA	AA08	77	0.27	AA08
24	1qf6_B_G24_C25	AAA	AA00	83	0.17	AA00
25	1qf6_B_C25_A26	AAA	AA00	74	0.33	AA00
26	1qf6_B_A26_G27	AAA	AA00	60	0.32	AA00
27	1qf6_B_G27_C28	AAA	AA00	81	0.18	AA00
28	1qf6_B_C28_G29	AAA	AA00	84	0.17	AA00
29	1qf6_B_G29_C30	AAA	AA00	82	0.20	AA00
30	1qf6_B_C30_A31	AAA	AA00	74	0.20	AA00
31	1qf6_B_A31_U32	AAA	AA00	84	0.25	AA00
32	1qf6_B_U32_U33	ICL	IC02	79	0.32	IC02
33	1qf6_B_U33_C34	NAN	NANT	0	0.70	ZZ02
34	1qf6_B_C34_G35	NAN	NANT	0	0.66	OP20
35	1qf6_B_G35_U36	NAN	NANT	0	0.57	OP22
36	1qf6_B_U36_AET37	NAN	NANT	0	0.80	OP16
37	1qf6_B_AET37_A38	NAN	NANT	0	1.02	OP26
38	1qf6_B_A38_U39	NAN	NANT	0	0.83	OP14
39	1qf6_B_U39_G40	AAA	AA00	44	0.23	AA00
40	1qf6_B_G40_C41	AAA	AA00	92	0.15	AA00
41	1qf6_B_C41_G42	AAA	AA00	83	0.25	AA00
42	1qf6_B_G42_A43	AAA	AA00	79	0.12	AA00
43	1qf6_B_A43_A44	AAw	AA01	77	0.20	AA01
44	1qf6_B_A44_G45	AAA	AA08	59	0.24	AA08
45	1qf6_B_G45_G7M46	NAN	NANT	0	1.02	AA07
46	1qf6_B_G7M46_U47	NAN	NANT	0	0.61	AB05
47	1qf6_B_U47_C48	NAN	NANT	0	0.36	OP22
48	1qf6_B_C48_G49	NAN	NANT	0	1.64	OP06
49	1qf6_B_G49_U50	AAA	AA00	62	0.23	AA00
50	1qf6_B_U50_A51	AAA	AA00	92	0.13	AA00
51	1qf6_B_A51_G52	AAw	AA01	88	0.17	AA01
52	1qf6_B_G52_G53	AAA	AA08	79	0.23	AA08
53	1qf6_B_G53_5MU54	AAA	AA00	64	0.25	AA00
54	1qf6_B_C56_G57	AAA	AA08	84	0.23	AA08
55	1qf6_B_G57_A58	ICL	IC01	87	0.36	IC01
56	1qf6_B_A58_C59	OPN	OP25	69	0.16	OP25
57	1qf6_B_C59_U60	A-B	AB05	62	0.28	AB05
58	1qf6_B_U60_C61	OPN	OP12	81	0.17	OP12
59	1qf6_B_C61_C62	AAA	AA00	71	0.24	AA00
60	1qf6_B_C62_U63	AAA	AA00	93	0.16	AA00
61	1qf6_B_U63_A64	AAA	AA00	80	0.16	AA00
62	1qf6_B_A64_U65	AAA	AA00	86	0.24	AA00
63	1qf6_B_U65_U66	AAA	AA00	67	0.19	AA00
64	1qf6_B_U66_A67	AAA	AA00	78	0.20	AA00
65	1qf6_B_A67_U68	AAA	AA00	78	0.13	AA00
66	1qf6_B_U68_C69	AAA	AA00	60	0.22	AA00
67	1qf6_B_C69_G70	AAA	AA00	48	0.28	AA00
68	1qf6_B_G70_G71	AAw	AA01	84	0.21	AA01
69	1qf6_B_G71_C72	AAA	AA00	63	0.20	AA00
70	1qf6_B_C72_A73	AAA	AA00	76	0.28	AA00
71	1qf6_B_A73_C74	AAA	AA00	74	0.33	AA00
72	1qf6_B_C74_C75	AAA	AA00	70	0.33	AA00
73	1qf6_B_C75_A76	NAN	NANT	0	1.20	OP01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 73 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible