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Conformers: ABBIImiBZICOPNSYNN
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Solution structure of the dyskeratosis congenita mutant P2b hairpin from human telomerase RNA

Results of the assignment of 280 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0011q75-m10_A_G1_G2AAAAA00110.40 AA00
0021q75-m11_A_G1_G2AAAAA0090.41 AA00
0031q75-m12_A_G1_G2AAAAA00110.45 AA00
0041q75-m13_A_G1_G2NANNANT00.51 AB04
0051q75-m14_A_G1_G2AAAAA04130.51 AA04
0061q75-m15_A_G1_G2AAAAA08120.40 AA08
0071q75-m16_A_G1_G2AAAAA00100.47 AA00
0081q75-m17_A_G1_G2AAAAA03140.40 AA03
0091q75-m18_A_G1_G2AAAAA00110.45 AA00
0101q75-m19_A_G1_G2AAAAA00140.39 AA00
0111q75-m1_A_G1_G2AAAAA00110.41 AA00
0121q75-m20_A_G1_G2AAAAA0080.43 AA00
0131q75-m2_A_G1_G2AAAAA08130.38 AA08
0141q75-m3_A_G1_G2AAAAA00140.40 AA00
0151q75-m4_A_G1_G2AAAAA00100.41 AA00
0161q75-m5_A_G1_G2AAAAA00130.41 AA00
0171q75-m6_A_G1_G2AAAAA00100.43 AA00
0181q75-m7_A_G1_G2AAAAA00120.42 AA00
0191q75-m8_A_G1_G2AAAAA00110.42 AA00
0201q75-m9_A_G1_G2AAAAA00220.37 AA00
0211q75-m10_A_G2_C3AAAAA03470.29 AA03
0221q75-m11_A_G2_C3AAAAA00490.33 AA00
0231q75-m12_A_G2_C3AAAAA00480.33 AA00
0241q75-m13_A_G2_C3AAAAA00100.39 AA00
0251q75-m14_A_G2_C3AAAAA00150.40 AA00
0261q75-m15_A_G2_C3AAAAA00540.30 AA00
0271q75-m16_A_G2_C3AAAAA00450.31 AA00
0281q75-m17_A_G2_C3AAAAA00350.33 AA00
0291q75-m18_A_G2_C3AAAAA03370.32 AA03
0301q75-m19_A_G2_C3AAAAA00510.29 AA00
0311q75-m1_A_G2_C3AAAAA00480.34 AA00
0321q75-m20_A_G2_C3AAAAA00300.32 AA00
0331q75-m2_A_G2_C3AAAAA00400.33 AA00
0341q75-m3_A_G2_C3AAAAA00440.34 AA00
0351q75-m4_A_G2_C3AAAAA00390.33 AA00
0361q75-m5_A_G2_C3AAAAA00390.29 AA00
0371q75-m6_A_G2_C3AAAAA00250.33 AA00
0381q75-m7_A_G2_C3AAAAA00410.35 AA00
0391q75-m8_A_G2_C3AAAAA00440.31 AA00
0401q75-m9_A_G2_C3AAAAA00550.37 AA00
0411q75-m10_A_C3_U4AAAAA00310.43 AA00
0421q75-m11_A_C3_U4AAAAA08570.27 AA08
0431q75-m12_A_C3_U4AAAAA00350.33 AA00
0441q75-m13_A_C3_U4AAAAA00310.34 AA00
0451q75-m14_A_C3_U4AAAAA00330.49 AA00
0461q75-m15_A_C3_U4AAAAA00360.29 AA00
0471q75-m16_A_C3_U4AAAAA00340.38 AA00
0481q75-m17_A_C3_U4AAAAA00310.30 AA00
0491q75-m18_A_C3_U4AAAAA00370.29 AA00
0501q75-m19_A_C3_U4AAAAA00770.32 AA00
0511q75-m1_A_C3_U4AAAAA00500.36 AA00
0521q75-m20_A_C3_U4AAAAA00350.34 AA00
0531q75-m2_A_C3_U4AAAAA00520.45 AA00
0541q75-m3_A_C3_U4AAAAA00370.34 AA00
0551q75-m4_A_C3_U4AAAAA00650.37 AA00
0561q75-m5_A_C3_U4AAAAA00740.33 AA00
0571q75-m6_A_C3_U4AAAAA00410.32 AA00
0581q75-m7_A_C3_U4AAAAA04810.27 AA04
0591q75-m8_A_C3_U4AAAAA00350.31 AA00
0601q75-m9_A_C3_U4AAAAA00360.33 AA00
0611q75-m10_A_U4_C5AAAAA00390.42 AA00
0621q75-m11_A_U4_C5AAAAA00310.44 AA00
0631q75-m12_A_U4_C5AAAAA00300.41 AA00
0641q75-m13_A_U4_C5AAAAA00310.40 AA00
0651q75-m14_A_U4_C5AAAAA00150.40 AA00
0661q75-m15_A_U4_C5AAAAA00490.39 AA00
0671q75-m16_A_U4_C5AAAAA0080.45 AA00
0681q75-m17_A_U4_C5AAAAA00150.45 AA00
0691q75-m18_A_U4_C5AAAAA00300.40 AA00
0701q75-m19_A_U4_C5AAAAA00130.45 AA00
0711q75-m1_A_U4_C5AAAAA00170.48 AA00
0721q75-m20_A_U4_C5NANNANT00.51 AA04
0731q75-m2_A_U4_C5AAAAA00140.45 AA00
0741q75-m3_A_U4_C5AAAAA00330.42 AA00
0751q75-m4_A_U4_C5AAAAA00370.38 AA00
0761q75-m5_A_U4_C5AAAAA00130.48 AA00
0771q75-m6_A_U4_C5AAAAA00400.39 AA00
0781q75-m7_A_U4_C5AAAAA00130.49 AA00
0791q75-m8_A_U4_C5AAAAA00400.41 AA00
0801q75-m9_A_U4_C5AAAAA00220.46 AA00
0811q75-m10_A_C5_U6AAAAA00100.61 AA00
0821q75-m11_A_C5_U6AAAAA04210.64 AA04
0831q75-m12_A_C5_U6AAAAA04440.57 AA04
0841q75-m13_A_C5_U6AAAAA04200.58 AA04
0851q75-m14_A_C5_U6AAAAA00300.52 AA00
0861q75-m15_A_C5_U6AAAAA04470.55 AA04
0871q75-m16_A_C5_U6AAAAA04270.71 AA04
0881q75-m17_A_C5_U6AAAAA04210.66 AA04
0891q75-m18_A_C5_U6AAAAA04430.55 AA04
0901q75-m19_A_C5_U6AAAAA04360.61 AA04
0911q75-m1_A_C5_U6AAAAA04120.69 AA04
0921q75-m20_A_C5_U6AAAAA04270.58 AA04
0931q75-m2_A_C5_U6AAAAA04290.59 AA04
0941q75-m3_A_C5_U6AAAAA04190.64 AA04
0951q75-m4_A_C5_U6AAAAA04420.63 AA04
0961q75-m5_A_C5_U6AAAAA04210.66 AA04
0971q75-m6_A_C5_U6AAAAA04230.64 AA04
0981q75-m7_A_C5_U6AAAAA04100.65 AA04
0991q75-m8_A_C5_U6AAAAA04370.66 AA04
1001q75-m9_A_C5_U6AAAAA08220.63 AA08
1011q75-m10_A_U6_C7NANNANT00.62 OP09
1021q75-m11_A_U6_C7NANNANT01.42 OP28
1031q75-m12_A_U6_C7NANNANT01.50 OP28
1041q75-m13_A_U6_C7NANNANT01.52 OP28
1051q75-m14_A_U6_C7NANNANT00.74 OP09
1061q75-m15_A_U6_C7NANNANT01.58 OP28
1071q75-m16_A_U6_C7NANNANT00.56 OP09
1081q75-m17_A_U6_C7NANNANT01.54 OP28
1091q75-m18_A_U6_C7NANNANT01.63 OP01
1101q75-m19_A_U6_C7NANNANT01.52 OP28
1111q75-m1_A_U6_C7NANNANT01.39 OP28
1121q75-m20_A_U6_C7NANNANT01.26 OP06
1131q75-m2_A_U6_C7NANNANT01.48 OP28
1141q75-m3_A_U6_C7NANNANT01.57 OP28
1151q75-m4_A_U6_C7NANNANT01.50 OP28
1161q75-m5_A_U6_C7NANNANT01.39 OP28
1171q75-m6_A_U6_C7NANNANT00.76 OP09
1181q75-m7_A_U6_C7NANNANT01.56 OP28
1191q75-m8_A_U6_C7NANNANT01.54 OP28
1201q75-m9_A_U6_C7NANNANT01.35 OP28
1211q75-m10_A_C7_A8NANNANT01.09 OP30
1221q75-m11_A_C7_A8NANNANT00.55 OP20
1231q75-m12_A_C7_A8NANNANT01.20 OP29
1241q75-m13_A_C7_A8NANNANT01.32 OP29
1251q75-m14_A_C7_A8NANNANT01.29 OP29
1261q75-m15_A_C7_A8NANNANT00.76 OP11
1271q75-m16_A_C7_A8NANNANT01.81 IC07
1281q75-m17_A_C7_A8NANNANT00.63 OP20
1291q75-m18_A_C7_A8NANNANT00.82 OP11
1301q75-m19_A_C7_A8NANNANT00.59 OP20
1311q75-m1_A_C7_A8NANNANT00.64 OP20
1321q75-m20_A_C7_A8NANNANT00.88 OP11
1331q75-m2_A_C7_A8NANNANT00.57 OP11
1341q75-m3_A_C7_A8NANNANT00.65 OP20
1351q75-m4_A_C7_A8NANNANT00.65 OP11
1361q75-m5_A_C7_A8NANNANT00.63 OP20
1371q75-m6_A_C7_A8NANNANT00.51 OP20
1381q75-m7_A_C7_A8NANNANT00.56 OP20
1391q75-m8_A_C7_A8NANNANT01.01 OP30
1401q75-m9_A_C7_A8NANNANT00.70 OP11
1411q75-m10_A_A8_G9NANNANT00.92 ZZ2S
1421q75-m11_A_A8_G9NANNANT01.01 ZZ2S
1431q75-m12_A_A8_G9NANNANT00.91 ZZ1S
1441q75-m13_A_A8_G9NANNANT01.07 ZZ2S
1451q75-m14_A_A8_G9NANNANT00.99 ZZ2S
1461q75-m15_A_A8_G9NANNANT01.02 ZZ1S
1471q75-m16_A_A8_G9NANNANT00.87 ZZ2S
1481q75-m17_A_A8_G9NANNANT01.02 ZZ2S
1491q75-m18_A_A8_G9NANNANT02.15 BB1S
1501q75-m19_A_A8_G9NANNANT00.93 ZZ1S
1511q75-m1_A_A8_G9NANNANT00.96 ZZ2S
1521q75-m20_A_A8_G9NANNANT01.63 OP14
1531q75-m2_A_A8_G9NANNANT00.92 ZZ2S
1541q75-m3_A_A8_G9NANNANT01.14 OP1S
1551q75-m4_A_A8_G9NANNANT00.97 ZZ2S
1561q75-m5_A_A8_G9NANNANT00.92 ZZ1S
1571q75-m6_A_A8_G9NANNANT00.90 ZZ2S
1581q75-m7_A_A8_G9NANNANT01.01 ZZ2S
1591q75-m8_A_A8_G9NANNANT00.85 ZZ2S
1601q75-m9_A_A8_G9NANNANT00.75 ZZ1S
1611q75-m10_A_G9_U10NANNANT01.31 OP30
1621q75-m11_A_G9_U10NANNANT01.99 OPS1
1631q75-m12_A_G9_U10NANNANT01.85 OPS1
1641q75-m13_A_G9_U10NANNANT02.39 OPS1
1651q75-m14_A_G9_U10NANNANT02.03 OPS1
1661q75-m15_A_G9_U10NANNANT01.97 OPS1
1671q75-m16_A_G9_U10NANNANT02.06 OPS1
1681q75-m17_A_G9_U10NANNANT01.06 OP30
1691q75-m18_A_G9_U10NANNANT02.00 OPS1
1701q75-m19_A_G9_U10NANNANT02.26 OPS1
1711q75-m1_A_G9_U10NANNANT01.94 OPS1
1721q75-m20_A_G9_U10NANNANT02.27 OPS1
1731q75-m2_A_G9_U10NANNANT02.22 OPS1
1741q75-m3_A_G9_U10NANNANT01.00 OP29
1751q75-m4_A_G9_U10NANNANT01.74 OPS1
1761q75-m5_A_G9_U10NANNANT01.97 OPS1
1771q75-m6_A_G9_U10NANNANT02.16 OPS1
1781q75-m7_A_G9_U10NANNANT01.80 OPS1
1791q75-m8_A_G9_U10NANNANT02.12 OPS1
1801q75-m9_A_G9_U10NANNANT01.91 OPS1
1811q75-m10_A_U10_G11NANNANT00.37 OP27
1821q75-m11_A_U10_G11NANNANT00.44 OP27
1831q75-m12_A_U10_G11NANNANT01.98 OP16
1841q75-m13_A_U10_G11NANNANT00.71 OP27
1851q75-m14_A_U10_G11NANNANT02.01 OP16
1861q75-m15_A_U10_G11NANNANT00.43 OP27
1871q75-m16_A_U10_G11NANNANT02.04 OP16
1881q75-m17_A_U10_G11NANNANT00.83 OP27
1891q75-m18_A_U10_G11NANNANT02.08 OP16
1901q75-m19_A_U10_G11NANNANT01.41 OP31
1911q75-m1_A_U10_G11NANNANT00.41 OP27
1921q75-m20_A_U10_G11NANNANT00.69 OP27
1931q75-m2_A_U10_G11NANNANT02.07 OP16
1941q75-m3_A_U10_G11NANNANT00.43 OP27
1951q75-m4_A_U10_G11NANNANT01.14 OP10
1961q75-m5_A_U10_G11NANNANT02.07 OP16
1971q75-m6_A_U10_G11NANNANT01.97 OP16
1981q75-m7_A_U10_G11NANNANT01.22 OP10
1991q75-m8_A_U10_G11NANNANT00.61 OP27
2001q75-m9_A_U10_G11NANNANT01.27 OP10
2011q75-m10_A_G11_A12AAAAA08310.31 AA08
2021q75-m11_A_G11_A12AAAAA00470.28 AA00
2031q75-m12_A_G11_A12NANNANT00.52 AA04
2041q75-m13_A_G11_A12AAAAA08200.24 AA08
2051q75-m14_A_G11_A12AAAAA08140.28 AA08
2061q75-m15_A_G11_A12AAAAA08140.45 AA08
2071q75-m16_A_G11_A12AAAAA0870.51 AA08
2081q75-m17_A_G11_A12AAAAA00300.33 AA00
2091q75-m18_A_G11_A12AAAAA08260.27 AA08
2101q75-m19_A_G11_A12AAAAA08140.42 AA08
2111q75-m1_A_G11_A12AAAAA08190.43 AA08
2121q75-m20_A_G11_A12AAAAA00390.28 AA00
2131q75-m2_A_G11_A12AAAAA08310.32 AA08
2141q75-m3_A_G11_A12AAAAA08280.36 AA08
2151q75-m4_A_G11_A12AAAAA08300.34 AA08
2161q75-m5_A_G11_A12AAAAA08220.34 AA08
2171q75-m6_A_G11_A12AAAAA08240.36 AA08
2181q75-m7_A_G11_A12AAAAA04560.41 AA04
2191q75-m8_A_G11_A12AAAAA08390.29 AA08
2201q75-m9_A_G11_A12AAAAA08230.32 AA08
2211q75-m10_A_A12_G13AAAAA04570.29 AA04
2221q75-m11_A_A12_G13AAAAA04630.24 AA04
2231q75-m12_A_A12_G13AAAAA00120.38 AA00
2241q75-m13_A_A12_G13AAAAA00100.33 AA00
2251q75-m14_A_A12_G13AAAAA0090.44 AA00
2261q75-m15_A_A12_G13AAAAA00160.36 AA00
2271q75-m16_A_A12_G13AAAAA04380.41 AA04
2281q75-m17_A_A12_G13AAAAA00210.29 AA00
2291q75-m18_A_A12_G13AAAAA04460.35 AA04
2301q75-m19_A_A12_G13AAAAA08430.28 AA08
2311q75-m1_A_A12_G13AAAAA00140.35 AA00
2321q75-m20_A_A12_G13AAAAA04540.32 AA04
2331q75-m2_A_A12_G13AAAAA04390.33 AA04
2341q75-m3_A_A12_G13AAAAA04340.39 AA04
2351q75-m4_A_A12_G13AAAAA04550.31 AA04
2361q75-m5_A_A12_G13AAAAA04550.32 AA04
2371q75-m6_A_A12_G13AAAAA04540.31 AA04
2381q75-m7_A_A12_G13AAAAA04680.20 AA04
2391q75-m8_A_A12_G13AAAAA04620.27 AA04
2401q75-m9_A_A12_G13AAAAA04420.32 AA04
2411q75-m10_A_G13_C14AAAAA08660.18 AA08
2421q75-m11_A_G13_C14AAAAA00340.35 AA00
2431q75-m12_A_G13_C14AAAAA08490.20 AA08
2441q75-m13_A_G13_C14AAAAA00290.28 AA00
2451q75-m14_A_G13_C14AAAAA08310.29 AA08
2461q75-m15_A_G13_C14AAAAA08560.18 AA08
2471q75-m16_A_G13_C14AAAAA00350.24 AA00
2481q75-m17_A_G13_C14AAAAA00370.25 AA00
2491q75-m18_A_G13_C14AAAAA04670.27 AA04
2501q75-m19_A_G13_C14AAAAA00640.21 AA00
2511q75-m1_A_G13_C14AAAAA00360.27 AA00
2521q75-m20_A_G13_C14AAAAA08590.22 AA08
2531q75-m2_A_G13_C14AAAAA00370.26 AA00
2541q75-m3_A_G13_C14AAAAA00420.27 AA00
2551q75-m4_A_G13_C14AAAAA08560.30 AA08
2561q75-m5_A_G13_C14AAAAA08660.27 AA08
2571q75-m6_A_G13_C14AAAAA00420.25 AA00
2581q75-m7_A_G13_C14AAAAA08610.32 AA08
2591q75-m8_A_G13_C14AAAAA00510.26 AA00
2601q75-m9_A_G13_C14AAAAA00510.30 AA00
2611q75-m10_A_C14_C15AAAAA00490.29 AA00
2621q75-m11_A_C14_C15AAAAA0070.43 AA00
2631q75-m12_A_C14_C15AAAAA00130.42 AA00
2641q75-m13_A_C14_C15NANNANT00.37 AB04
2651q75-m14_A_C14_C15NANNANT00.36 AB04
2661q75-m15_A_C14_C15AAAAA03260.45 AA03
2671q75-m16_A_C14_C15AAAAA04330.46 AA04
2681q75-m17_A_C14_C15AAAAA04370.46 AA04
2691q75-m18_A_C14_C15AAuAA12290.47 AA12
2701q75-m19_A_C14_C15AAAAA00320.26 AA00
2711q75-m1_A_C14_C15AAAAA00380.33 AA00
2721q75-m20_A_C14_C15AAAAA00230.42 AA00
2731q75-m2_A_C14_C15AAAAA00260.36 AA00
2741q75-m3_A_C14_C15AAAAA04460.43 AA04
2751q75-m4_A_C14_C15AAAAA00290.35 AA00
2761q75-m5_A_C14_C15AAAAA00240.32 AA00
2771q75-m6_A_C14_C15AAAAA00240.35 AA00
2781q75-m7_A_C14_C15AAAAA00280.35 AA00
2791q75-m8_A_C14_C15AAAAA00420.29 AA00
2801q75-m9_A_C14_C15AAAAA00110.41 AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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