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Conformers: ABBIImiBZICOPNSYNN
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An asymmetric NFAT1-RHR homodimer on a pseudo-palindromic, Kappa-B site

Results of the assignment of 78 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011pzu_X_DT1_DT2NANNANT00.55 BB02
021pzu_X_DT2_DG3BBwBB02480.34 BB02
031pzu_X_DG3_DA4NANNANT00.40 BB10
041pzu_X_DA4_DG5NANNANT00.45 BB08
051pzu_X_DG5_DG6BBwBB02300.47 BB02
061pzu_X_DG6_DA7BBwBB02550.30 BB02
071pzu_X_DA7_DA8BBBBB00620.24 BB00
081pzu_X_DA8_DT9BBwBB11660.24 BB11
091pzu_X_DT9_DT10BBwBB02520.31 BB02
101pzu_X_DT10_DT11BBwBB03500.37 BB03
111pzu_X_DT11_DC12BBwBB02510.38 BB02
121pzu_X_DC12_DC13BBwBB02890.23 BB02
131pzu_X_DC13_DA14BBwBB03550.37 BB03
141pzu_Y_DA1_DA2BBBBB00100.34 BB00
151pzu_Y_DA2_DT3NANNANT00.46 BB02
161pzu_Y_DT3_DG4BBwBB11690.33 BB11
171pzu_Y_DG4_DG5BBwBB02570.42 BB02
181pzu_Y_DG5_DA6miBBB13780.22 BB13
191pzu_Y_DA6_DA7BBwBB16580.52 BB16
201pzu_Y_DA7_DA8BBBBB00690.23 BB00
211pzu_Y_DA8_DT9BBBBB00800.16 BB00
221pzu_Y_DT9_DT10BBBBB00650.33 BB00
231pzu_Y_DT10_DC11BBwBB02580.27 BB02
241pzu_Y_DC11_DC12BBBBB00420.28 BB00
251pzu_Y_DC12_DT13BBwBB02830.15 BB02
261pzu_Y_DT13_DC14NANNANT00.35 BB11
271pzu_V_DT1_DT2BBwBB03680.40 BB03
281pzu_V_DT2_DG3NANNANT00.66 BB02
291pzu_V_DG3_DA4NANNANT00.59 BB02
301pzu_V_DA4_DG5BBBBB00640.34 BB00
311pzu_V_DG5_DG6BBwBB02690.23 BB02
321pzu_V_DG6_DA7miBBB13820.22 BB13
331pzu_V_DA7_DA8BBBBB00130.50 BB00
341pzu_V_DA8_DT9BBBBB00300.40 BB00
351pzu_V_DT9_DT10BBwBB02690.18 BB02
361pzu_V_DT10_DT11BBBBB00480.28 BB00
371pzu_V_DT11_DC12BBwBB02910.14 BB02
381pzu_V_DC12_DC13BBwBB02730.27 BB02
391pzu_V_DC13_DA14BBBBB00220.31 BB00
401pzu_Z_DA1_DA2BBwBB02660.35 BB02
411pzu_Z_DA2_DT3NANNANT00.62 BB12
421pzu_Z_DT3_DG4BBBBB00530.41 BB00
431pzu_Z_DG4_DG5BBBBB00630.16 BB00
441pzu_Z_DG5_DA6miBBB12510.31 BB12
451pzu_Z_DA6_DA7NANNANT00.54 BB11
461pzu_Z_DA7_DA8miBBB15590.29 BB15
471pzu_Z_DA8_DT9BBwBB02740.24 BB02
481pzu_Z_DT9_DT10BBwBB03300.54 BB03
491pzu_Z_DT10_DC11BBwBB02350.43 BB02
501pzu_Z_DC11_DC12BBwBB02810.21 BB02
511pzu_Z_DC12_DT13BBBBB00700.20 BB00
521pzu_Z_DT13_DC14NANNANT00.43 BB02
531pzu_T_DT1_DT2BBBBB00440.35 BB00
541pzu_T_DT2_DG3BBBBB00370.33 BB00
551pzu_T_DG3_DA4NANNANT00.58 BB02
561pzu_T_DA4_DG5BBBBB00510.39 BB00
571pzu_T_DG5_DG6BBwBB02690.23 BB02
581pzu_T_DG6_DA7miBBB13790.26 BB13
591pzu_T_DA7_DA8BBBBB00340.38 BB00
601pzu_T_DA8_DT9NANNANT00.48 BB03
611pzu_T_DT9_DT10BBwBB02730.33 BB02
621pzu_T_DT10_DT11BBBBB00640.28 BB00
631pzu_T_DT11_DC12BBwBB02890.11 BB02
641pzu_T_DC12_DC13BBwBB02680.25 BB02
651pzu_T_DC13_DA14BBBBB00360.35 BB00
661pzu_W_DA1_DA2BBwBB02640.33 BB02
671pzu_W_DA2_DT3NANNANT00.56 BB02
681pzu_W_DT3_DG4BBBBB00640.31 BB00
691pzu_W_DG4_DG5miBBB15320.26 BB15
701pzu_W_DG5_DA6miBBB13790.32 BB13
711pzu_W_DA6_DA7BBwBB03180.43 BB03
721pzu_W_DA7_DA8BBwBB02530.29 BB02
731pzu_W_DA8_DT9BBBBB00480.22 BB00
741pzu_W_DT9_DT10B12BB05650.26 BB05
751pzu_W_DT10_DC11BBwBB02520.43 BB02
761pzu_W_DC11_DC12BBwBB02640.32 BB02
771pzu_W_DC12_DT13BBBBB00430.29 BB00
781pzu_W_DT13_DC14BBBBB00760.24 BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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