DNATCO v4.1: results

crystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr element

Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1pp8_E_DG26_DT27	NAN	NANT	0	0.51	AB03
02	1pp8_E_DT27_DC28	BBB	BB01	42	0.24	BB01
03	1pp8_E_DC28_DA29	BBw	BB02	23	0.40	BB02
04	1pp8_E_DA29_DC30	miB	BB12	39	0.37	BB12
05	1pp8_E_DC30_DT31	NAN	NANT	0	0.57	BB02
06	1pp8_E_DT31_DT32	B-A	BA05	14	0.29	BA05
07	1pp8_E_DT32_DC33	A-B	AB03	79	0.22	AB03
08	1pp8_E_DC33_DA34	BBB	BB00	33	0.46	BB00
09	1pp8_E_DA34_DC35	miB	BB12	56	0.26	BB12
10	1pp8_E_DC35_DA36	NAN	NANT	0	0.50	BB16
11	1pp8_E_DA36_DT37	NAN	NANT	0	0.35	BB13
12	1pp8_I_DG26_DT27	BBB	BB00	40	0.27	BB00
13	1pp8_I_DT27_DC28	BBB	BB00	73	0.22	BB00
14	1pp8_I_DC28_DA29	BBB	BB00	49	0.24	BB00
15	1pp8_I_DA29_DC30	miB	BB12	83	0.20	BB12
16	1pp8_I_DC30_DT31	NAN	NANT	0	0.57	BB16
17	1pp8_I_DT31_DT32	BBB	BB01	71	0.20	BB01
18	1pp8_I_DT32_DC33	BBB	BB00	55	0.29	BB00
19	1pp8_I_DC33_DA34	BBB	BB00	89	0.19	BB00
20	1pp8_I_DA34_DC35	miB	BB10	24	0.57	BB10
21	1pp8_I_DC35_DA36	B12	BB04	37	0.54	BB04
22	1pp8_I_DA36_DT37	B12	BB04	48	0.36	BB04
23	1pp8_Y_DG26_DT27	NAN	NANT	0	0.70	BB16
24	1pp8_Y_DT27_DC28	BBB	BB00	45	0.28	BB00
25	1pp8_Y_DC28_DA29	BBB	BB00	85	0.27	BB00
26	1pp8_Y_DA29_DC30	miB	BB12	80	0.23	BB12
27	1pp8_Y_DC30_DT31	NAN	NANT	0	0.53	BB16
28	1pp8_Y_DT31_DT32	BBB	BB01	56	0.21	BB01
29	1pp8_Y_DT32_DC33	A-B	AB03	88	0.25	AB03
30	1pp8_Y_DC33_DA34	B12	BB04	71	0.30	BB04
31	1pp8_Y_DA34_DC35	NAN	NANT	0	0.41	BB02
32	1pp8_Y_DC35_DA36	BBB	BB00	15	0.43	BB00
33	1pp8_Y_DA36_DT37	BBB	BB01	42	0.34	BB01
34	1pp8_K_DG26_DT27	BBB	BB00	45	0.31	BB00
35	1pp8_K_DT27_DC28	BBw	BB02	59	0.25	BB02
36	1pp8_K_DC28_DA29	BBB	BB00	71	0.41	BB00
37	1pp8_K_DA29_DC30	miB	BB12	85	0.20	BB12
38	1pp8_K_DC30_DT31	NAN	NANT	0	0.59	BB02
39	1pp8_K_DT31_DT32	B-A	BA05	14	0.28	BA05
40	1pp8_K_DT32_DC33	A-B	AB03	62	0.28	AB03
41	1pp8_K_DC33_DA34	BBB	BB00	55	0.41	BB00
42	1pp8_K_DA34_DC35	NAN	NANT	0	0.54	BB05
43	1pp8_K_DC35_DA36	NAN	NANT	0	0.21	BB03
44	1pp8_K_DA36_DT37	BBw	BB02	19	0.35	BB02
45	1pp8_T_DC3_DA4	NAN	NANT	0	0.50	BB00
46	1pp8_T_DA4_DT5	BBB	BB00	27	0.45	BB00
47	1pp8_T_DT5_DG6	BB2	BB07	30	0.29	BB07
48	1pp8_T_DG6_DT7	NAN	NANT	0	0.53	BB15
49	1pp8_T_DT7_DG8	BBB	BB00	59	0.37	BB00
50	1pp8_T_DG8_DA9	B12	BB04	71	0.25	BB04
51	1pp8_T_DA9_DA10	BBB	BB00	39	0.32	BB00
52	1pp8_T_DA10_DG11	NAN	NANT	0	0.44	BB02
53	1pp8_T_DG11_DT12	BBB	BB00	37	0.37	BB00
54	1pp8_T_DT12_DG13	B12	BB04	46	0.32	BB04
55	1pp8_T_DG13_DA14	BBB	BB00	70	0.17	BB00
56	1pp8_R_DC3_DA4	NAN	NANT	0	0.48	BB16
57	1pp8_R_DA4_DT5	BBB	BB01	75	0.26	BB01
58	1pp8_R_DT5_DG6	BBB	BB00	49	0.33	BB00
59	1pp8_R_DG6_DT7	BBB	BB00	54	0.32	BB00
60	1pp8_R_DT7_DG8	B12	BB04	79	0.29	BB04
61	1pp8_R_DG8_DA9	BBB	BB00	66	0.25	BB00
62	1pp8_R_DA9_DA10	BBw	BB02	23	0.36	BB02
63	1pp8_R_DA10_DG11	B-A	BA05	48	0.30	BA05
64	1pp8_R_DG11_DT12	BBB	BB00	33	0.38	BB00
65	1pp8_R_DT12_DG13	B12	BB04	67	0.34	BB04
66	1pp8_R_DG13_DA14	B12	BB04	85	0.13	BB04
67	1pp8_J_DC3_DA4	NAN	NANT	0	0.51	AB03
68	1pp8_J_DA4_DT5	BBw	BB02	62	0.23	BB02
69	1pp8_J_DT5_DG6	BBB	BB01	37	0.26	BB01
70	1pp8_J_DG6_DT7	NAN	NANT	0	0.38	BB15
71	1pp8_J_DT7_DG8	BBB	BB00	75	0.50	BB00
72	1pp8_J_DG8_DA9	BBB	BB00	84	0.25	BB00
73	1pp8_J_DA9_DA10	BBB	BB00	90	0.15	BB00
74	1pp8_J_DA10_DG11	miB	BB13	67	0.35	BB13
75	1pp8_J_DG11_DT12	BBw	BB16	43	0.45	BB16
76	1pp8_J_DT12_DG13	B12	BB04	52	0.32	BB04
77	1pp8_J_DG13_DA14	miB	BB12	9	0.49	BB12
78	1pp8_G_DC3_DA4	NAN	NANT	0	0.67	BB16
79	1pp8_G_DA4_DT5	BBB	BB01	58	0.27	BB01
80	1pp8_G_DT5_DG6	BBw	BB02	47	0.33	BB02
81	1pp8_G_DG6_DT7	BBw	BB02	43	0.30	BB02
82	1pp8_G_DT7_DG8	BBB	BB00	85	0.42	BB00
83	1pp8_G_DG8_DA9	B12	BB04	68	0.27	BB04
84	1pp8_G_DA9_DA10	BBB	BB00	64	0.30	BB00
85	1pp8_G_DA10_DG11	NAN	NANT	0	0.40	BB02
86	1pp8_G_DG11_DT12	BBB	BB00	48	0.37	BB00
87	1pp8_G_DT12_DG13	miB	BB10	92	0.28	BB10
88	1pp8_G_DG13_DA14	NAN	NANT	0	0.46	BB04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 88 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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