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Conformers: ABBIImiBZICOPNSYNN
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STRUCTURE OF RIBONUCLEIC ACID, NMR, 1 STRUCTURE

Results of the assignment of 10 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
011pbl_A_OMC1_OMG2AAAAA00740.18 AA00
021pbl_A_OMG2_OMC3AAAAA00590.20 AA00
031pbl_A_OMC3_OMG4AAAAA00540.25 AA00
041pbl_A_OMG4_OMC5AAAAA04720.26 AA04
051pbl_A_OMC5_OMG6AAAAA04770.15 AA04
061pbl_B_OMC7_OMG8AAAAA00610.30 AA00
071pbl_B_OMG8_OMC9AAAAA00200.29 AA00
081pbl_B_OMC9_OMG10AAAAA00150.34 AA00
091pbl_B_OMG10_OMC11AAAAA04610.29 AA04
101pbl_B_OMC11_OMG12AAAAA00400.25 AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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