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Conformers: ABBIImiBZICOPNSYNN
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The Stem of SL1 RNA in HIV-1: Structure and Nucleocapsid Protein Binding for a 1X3 Internal Loop

Results of the assignment of 483 detected steps in 23 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0011osw-m10_A_G1_G2NANNANT00.81 AA01
0021osw-m11_A_G1_G2NANNANT00.35 AA01
0031osw-m12_A_G1_G2AAAAA00850.14 AA00
0041osw-m13_A_G1_G2AAAAA04230.40 AA04
0051osw-m14_A_G1_G2NANNANT00.37 AA00
0061osw-m15_A_G1_G2AAAAA00850.14 AA00
0071osw-m16_A_G1_G2AAAAA00880.19 AA00
0081osw-m17_A_G1_G2AAwAA01840.20 AA01
0091osw-m18_A_G1_G2AAwAA01960.18 AA01
0101osw-m19_A_G1_G2AAwAA01770.24 AA01
0111osw-m1_A_G1_G2AAwAA01820.22 AA01
0121osw-m20_A_G1_G2NANNANT00.52 AA01
0131osw-m21_A_G1_G2AAAAA00850.18 AA00
0141osw-m22_A_G1_G2NANNANT00.53 AA01
0151osw-m23_A_G1_G2AAAAA00870.19 AA00
0161osw-m2_A_G1_G2AAAAA04170.40 AA04
0171osw-m3_A_G1_G2AAwAA01610.29 AA01
0181osw-m4_A_G1_G2AAwAA01890.23 AA01
0191osw-m5_A_G1_G2AAwAA01240.39 AA01
0201osw-m6_A_G1_G2AAwAA01850.21 AA01
0211osw-m7_A_G1_G2NANNANT00.96 AA01
0221osw-m8_A_G1_G2AAwAA01920.21 AA01
0231osw-m9_A_G1_G2AAwAA01860.20 AA01
0241osw-m10_A_G2_A3AAAAA00800.21 AA00
0251osw-m11_A_G2_A3AAwAA01750.25 AA01
0261osw-m12_A_G2_A3AAAAA00840.14 AA00
0271osw-m13_A_G2_A3AAAAA00870.13 AA00
0281osw-m14_A_G2_A3AAwAA01950.18 AA01
0291osw-m15_A_G2_A3AAAAA00860.20 AA00
0301osw-m16_A_G2_A3AAwAA01860.24 AA01
0311osw-m17_A_G2_A3AAwAA01770.22 AA01
0321osw-m18_A_G2_A3AAAAA00840.16 AA00
0331osw-m19_A_G2_A3AAwAA01690.27 AA01
0341osw-m1_A_G2_A3AAwAA01870.20 AA01
0351osw-m20_A_G2_A3AAwAA01950.24 AA01
0361osw-m21_A_G2_A3AAwAA01960.19 AA01
0371osw-m22_A_G2_A3AAwAA01920.21 AA01
0381osw-m23_A_G2_A3AAwAA01930.18 AA01
0391osw-m2_A_G2_A3AAAAA00900.14 AA00
0401osw-m3_A_G2_A3AAwAA01890.27 AA01
0411osw-m4_A_G2_A3NANNANT00.46 AA01
0421osw-m5_A_G2_A3NANNANT00.52 AA01
0431osw-m6_A_G2_A3AAwAA01720.26 AA01
0441osw-m7_A_G2_A3AAwAA01540.39 AA01
0451osw-m8_A_G2_A3AAAAA00800.24 AA00
0461osw-m9_A_G2_A3AAwAA01630.33 AA01
0471osw-m10_A_A3_G4AAwAA01810.28 AA01
0481osw-m11_A_A3_G4AAwAA01810.30 AA01
0491osw-m12_A_A3_G4AAAAA00760.18 AA00
0501osw-m13_A_A3_G4AAwAA01920.25 AA01
0511osw-m14_A_A3_G4AAAAA00590.30 AA00
0521osw-m15_A_A3_G4AAwAA01820.19 AA01
0531osw-m16_A_A3_G4AAwAA01820.25 AA01
0541osw-m17_A_A3_G4AAwAA01490.39 AA01
0551osw-m18_A_A3_G4AAAAA00820.13 AA00
0561osw-m19_A_A3_G4AAwAA01920.20 AA01
0571osw-m1_A_A3_G4AAwAA01750.31 AA01
0581osw-m20_A_A3_G4AAAAA00570.26 AA00
0591osw-m21_A_A3_G4AAAAA00720.24 AA00
0601osw-m22_A_A3_G4AAAAA00810.20 AA00
0611osw-m23_A_A3_G4AAwAA01810.28 AA01
0621osw-m2_A_A3_G4AAwAA01960.24 AA01
0631osw-m3_A_A3_G4AAwAA01170.46 AA01
0641osw-m4_A_A3_G4NANNANT00.53 AA01
0651osw-m5_A_A3_G4AAAAA00850.13 AA00
0661osw-m6_A_A3_G4AAwAA01820.27 AA01
0671osw-m7_A_A3_G4AAwAA01860.28 AA01
0681osw-m8_A_A3_G4AAwAA01920.24 AA01
0691osw-m9_A_A3_G4AAAAA00660.24 AA00
0701osw-m10_A_G4_G5AAAAA00720.32 AA00
0711osw-m11_A_G4_G5AAAAA00450.40 AA00
0721osw-m12_A_G4_G5AAAAA00520.26 AA00
0731osw-m13_A_G4_G5AAAAA00680.31 AA00
0741osw-m14_A_G4_G5NANNANT00.46 AA10
0751osw-m15_A_G4_G5AAwAA01540.32 AA01
0761osw-m16_A_G4_G5AAAAA00370.43 AA00
0771osw-m17_A_G4_G5AAwAA01360.47 AA01
0781osw-m18_A_G4_G5AAAAA00650.27 AA00
0791osw-m19_A_G4_G5AAAAA00310.42 AA00
0801osw-m1_A_G4_G5AAAAA00320.47 AA00
0811osw-m20_A_G4_G5AAAAA00180.52 AA00
0821osw-m21_A_G4_G5AAAAA00600.29 AA00
0831osw-m22_A_G4_G5AAAAA00750.18 AA00
0841osw-m23_A_G4_G5AAAAA00300.42 AA00
0851osw-m2_A_G4_G5AAAAA00560.39 AA00
0861osw-m3_A_G4_G5NANNANT00.71 AA01
0871osw-m4_A_G4_G5AAwAA01270.43 AA01
0881osw-m5_A_G4_G5AAAAA00710.29 AA00
0891osw-m6_A_G4_G5AAAAA00620.30 AA00
0901osw-m7_A_G4_G5AAAAA00320.47 AA00
0911osw-m8_A_G4_G5AAwAA01330.42 AA01
0921osw-m9_A_G4_G5AAAAA00240.43 AA00
0931osw-m10_A_G5_C6NANNANT00.42 AB05
0941osw-m11_A_G5_C6AAuAA12500.56 AA12
0951osw-m12_A_G5_C6A-BAB05320.39 AB05
0961osw-m13_A_G5_C6NANNANT00.58 AB05
0971osw-m14_A_G5_C6NANNANT00.66 AA12
0981osw-m15_A_G5_C6AAAAA00320.44 AA00
0991osw-m16_A_G5_C6A-BAB05300.40 AB05
1001osw-m17_A_G5_C6A-BAB05590.32 AB05
1011osw-m18_A_G5_C6NANNANT00.45 AB04
1021osw-m19_A_G5_C6NANNANT00.50 AB05
1031osw-m1_A_G5_C6A-BAB05370.36 AB05
1041osw-m20_A_G5_C6NANNANT00.61 AA01
1051osw-m21_A_G5_C6A-BAB05510.30 AB05
1061osw-m22_A_G5_C6NANNANT00.47 IC04
1071osw-m23_A_G5_C6NANNANT00.49 AB05
1081osw-m2_A_G5_C6A-BAB05450.31 AB05
1091osw-m3_A_G5_C6A-BAB05420.39 AB05
1101osw-m4_A_G5_C6A-BAB05360.42 AB05
1111osw-m5_A_G5_C6NANNANT00.46 AB04
1121osw-m6_A_G5_C6NANNANT00.38 AB04
1131osw-m7_A_G5_C6A-BAB05420.32 AB05
1141osw-m8_A_G5_C6NANNANT00.48 AB05
1151osw-m9_A_G5_C6NANNANT00.52 AB05
1161osw-m10_A_C6_G7NANNANT00.98 AA01
1171osw-m11_A_C6_G7AAAAA00190.37 AA00
1181osw-m12_A_C6_G7NANNANT01.22 AA01
1191osw-m13_A_C6_G7NANNANT01.03 AA01
1201osw-m14_A_C6_G7AAAAA00170.36 AA00
1211osw-m15_A_C6_G7AAAAA00280.34 AA00
1221osw-m16_A_C6_G7NANNANT01.06 AA01
1231osw-m17_A_C6_G7NANNANT01.10 BA10
1241osw-m18_A_C6_G7NANNANT01.00 AA01
1251osw-m19_A_C6_G7NANNANT01.02 AA01
1261osw-m1_A_C6_G7NANNANT01.13 BA10
1271osw-m20_A_C6_G7NANNANT01.10 AA01
1281osw-m21_A_C6_G7NANNANT01.12 BA10
1291osw-m22_A_C6_G7NANNANT00.97 AA01
1301osw-m23_A_C6_G7NANNANT00.92 AA01
1311osw-m2_A_C6_G7NANNANT01.08 AA01
1321osw-m3_A_C6_G7NANNANT01.06 AA01
1331osw-m4_A_C6_G7NANNANT00.94 AA01
1341osw-m5_A_C6_G7NANNANT01.01 AA01
1351osw-m6_A_C6_G7NANNANT01.01 AA01
1361osw-m7_A_C6_G7NANNANT00.98 BA10
1371osw-m8_A_C6_G7NANNANT01.01 AA01
1381osw-m9_A_C6_G7NANNANT00.87 AA01
1391osw-m10_A_G7_C8AAAAA02620.27 AA02
1401osw-m11_A_G7_C8AAAAA00800.17 AA00
1411osw-m12_A_G7_C8AAAAA00630.18 AA00
1421osw-m13_A_G7_C8AAAAA00700.17 AA00
1431osw-m14_A_G7_C8AAAAA00840.19 AA00
1441osw-m15_A_G7_C8AAAAA00570.26 AA00
1451osw-m16_A_G7_C8AAAAA00400.23 AA00
1461osw-m17_A_G7_C8AAAAA00380.23 AA00
1471osw-m18_A_G7_C8AAAAA00680.23 AA00
1481osw-m19_A_G7_C8AAAAA00330.25 AA00
1491osw-m1_A_G7_C8AAAAA00310.20 AA00
1501osw-m20_A_G7_C8AAAAA00440.26 AA00
1511osw-m21_A_G7_C8AAAAA00440.22 AA00
1521osw-m22_A_G7_C8AAAAA00660.22 AA00
1531osw-m23_A_G7_C8AAAAA00760.20 AA00
1541osw-m2_A_G7_C8AAAAA02490.30 AA02
1551osw-m3_A_G7_C8AAAAA00650.18 AA00
1561osw-m4_A_G7_C8AAAAA00500.21 AA00
1571osw-m5_A_G7_C8AAAAA00570.20 AA00
1581osw-m6_A_G7_C8AAAAA00360.24 AA00
1591osw-m7_A_G7_C8AAAAA00870.14 AA00
1601osw-m8_A_G7_C8AAAAA00660.19 AA00
1611osw-m9_A_G7_C8AAAAA00640.19 AA00
1621osw-m10_A_C8_U9AAAAA02440.40 AA02
1631osw-m11_A_C8_U9AAAAA00550.22 AA00
1641osw-m12_A_C8_U9AAAAA00590.28 AA00
1651osw-m13_A_C8_U9AAAAA00220.25 AA00
1661osw-m14_A_C8_U9AAAAA00200.33 AA00
1671osw-m15_A_C8_U9AAAAA00150.35 AA00
1681osw-m16_A_C8_U9AAAAA00430.24 AA00
1691osw-m17_A_C8_U9AAAAA00430.26 AA00
1701osw-m18_A_C8_U9AAAAA00610.21 AA00
1711osw-m19_A_C8_U9NANNANT00.52 AA11
1721osw-m1_A_C8_U9AAAAA00310.32 AA00
1731osw-m20_A_C8_U9AAwAA11440.45 AA11
1741osw-m21_A_C8_U9NANNANT00.58 AA11
1751osw-m22_A_C8_U9AAAAA02140.51 AA02
1761osw-m23_A_C8_U9AAAAA00610.28 AA00
1771osw-m2_A_C8_U9NANNANT00.51 AA11
1781osw-m3_A_C8_U9AAAAA00550.22 AA00
1791osw-m4_A_C8_U9AAAAA0090.36 AA00
1801osw-m5_A_C8_U9NANNANT00.53 AA11
1811osw-m6_A_C8_U9AAAAA00140.34 AA00
1821osw-m7_A_C8_U9AAwAA11710.34 AA11
1831osw-m8_A_C8_U9AAAAA00450.27 AA00
1841osw-m9_A_C8_U9AAAAA02370.35 AA02
1851osw-m10_A_U9_A10NANNANT00.68 OP03
1861osw-m11_A_U9_A10OPNOP09820.15 OP09
1871osw-m12_A_U9_A10NANNANT00.41 OP09
1881osw-m13_A_U9_A10NANNANT01.07 OP09
1891osw-m14_A_U9_A10NANNANT01.06 OP09
1901osw-m15_A_U9_A10NANNANT01.09 OP09
1911osw-m16_A_U9_A10NANNANT01.27 OP29
1921osw-m17_A_U9_A10NANNANT00.70 OP03
1931osw-m18_A_U9_A10NANNANT00.70 OP03
1941osw-m19_A_U9_A10NANNANT00.87 OP04
1951osw-m1_A_U9_A10NANNANT01.04 OP09
1961osw-m20_A_U9_A10OPNOP09670.36 OP09
1971osw-m21_A_U9_A10NANNANT00.62 OP04
1981osw-m22_A_U9_A10NANNANT01.11 OP09
1991osw-m23_A_U9_A10OPNOP09710.24 OP09
2001osw-m2_A_U9_A10NANNANT00.96 OP04
2011osw-m3_A_U9_A10OPNOP09660.27 OP09
2021osw-m4_A_U9_A10NANNANT01.08 OP09
2031osw-m5_A_U9_A10NANNANT00.70 OP04
2041osw-m6_A_U9_A10NANNANT00.86 OP04
2051osw-m7_A_U9_A10NANNANT01.05 OP29
2061osw-m8_A_U9_A10NANNANT00.92 OP04
2071osw-m9_A_U9_A10NANNANT00.80 OP04
2081osw-m10_A_A10_C11NANNANT02.46 AA13
2091osw-m11_A_A10_C11OPNOP20460.55 OP20
2101osw-m12_A_A10_C11NANNANT01.55 ZZ02
2111osw-m13_A_A10_C11NANNANT01.51 OP25
2121osw-m14_A_A10_C11NANNANT01.10 OP19
2131osw-m15_A_A10_C11NANNANT01.13 OP19
2141osw-m16_A_A10_C11NANNANT02.57 AA02
2151osw-m17_A_A10_C11NANNANT02.32 AA07
2161osw-m18_A_A10_C11NANNANT01.28 OP09
2171osw-m19_A_A10_C11NANNANT01.94 OP15
2181osw-m1_A_A10_C11NANNANT01.14 OP19
2191osw-m20_A_A10_C11NANNANT01.70 ZZ02
2201osw-m21_A_A10_C11NANNANT02.49 AA13
2211osw-m22_A_A10_C11NANNANT01.50 OP25
2221osw-m23_A_A10_C11NANNANT00.56 OP12
2231osw-m2_A_A10_C11NANNANT02.58 AA02
2241osw-m3_A_A10_C11NANNANT01.85 ZZ02
2251osw-m4_A_A10_C11NANNANT01.50 OP25
2261osw-m5_A_A10_C11NANNANT02.40 AA13
2271osw-m6_A_A10_C11NANNANT01.14 OP19
2281osw-m7_A_A10_C11NANNANT01.44 OP25
2291osw-m8_A_A10_C11NANNANT01.09 OP19
2301osw-m9_A_A10_C11NANNANT02.40 AA13
2311osw-m10_A_C11_G12NANNANT01.78 OP26
2321osw-m11_A_C11_G12NANNANT01.21 OP26
2331osw-m12_A_C11_G12NANNANT00.40 ZZ1S
2341osw-m13_A_C11_G12NANNANT01.46 OP1S
2351osw-m14_A_C11_G12NANNANT01.20 ZZ1S
2361osw-m15_A_C11_G12NANNANT01.35 OP1S
2371osw-m16_A_C11_G12NANNANT01.09 ZZ1S
2381osw-m17_A_C11_G12NANNANT01.75 OP05
2391osw-m18_A_C11_G12NANNANT01.11 ZZ1S
2401osw-m19_A_C11_G12NANNANT01.71 OP26
2411osw-m1_A_C11_G12NANNANT01.25 ZZ1S
2421osw-m20_A_C11_G12NANNANT01.40 OP26
2431osw-m21_A_C11_G12NANNANT01.09 ZZ1S
2441osw-m22_A_C11_G12NANNANT01.20 ZZ1S
2451osw-m23_A_C11_G12NANNANT01.28 OP26
2461osw-m2_A_C11_G12NANNANT01.13 ZZ1S
2471osw-m3_A_C11_G12NANNANT00.54 ZZ1S
2481osw-m4_A_C11_G12NANNANT01.45 OP1S
2491osw-m5_A_C11_G12NANNANT01.13 ZZ1S
2501osw-m6_A_C11_G12NANNANT01.28 ZZ1S
2511osw-m7_A_C11_G12NANNANT01.76 OP26
2521osw-m8_A_C11_G12NANNANT01.31 ZZ1S
2531osw-m9_A_C11_G12NANNANT01.21 ZZ1S
2541osw-m10_A_G12_G13NANNANT00.81 AA05
2551osw-m11_A_G12_G13NANNANT00.60 AA05
2561osw-m12_A_G12_G13NANNANT00.45 AA05
2571osw-m13_A_G12_G13NANNANT00.67 AA05
2581osw-m14_A_G12_G13NANNANT00.65 AA05
2591osw-m15_A_G12_G13NANNANT00.64 AA05
2601osw-m16_A_G12_G13NANNANT00.72 AA05
2611osw-m17_A_G12_G13NANNANT00.91 AA05
2621osw-m18_A_G12_G13NANNANT00.54 AA05
2631osw-m19_A_G12_G13NANNANT00.99 AA11
2641osw-m1_A_G12_G13NANNANT00.63 AA05
2651osw-m20_A_G12_G13NANNANT01.29 OPS1
2661osw-m21_A_G12_G13NANNANT00.65 AA05
2671osw-m22_A_G12_G13NANNANT00.69 AA05
2681osw-m23_A_G12_G13NANNANT00.56 AA05
2691osw-m2_A_G12_G13NANNANT00.54 AA05
2701osw-m3_A_G12_G13NANNANT01.04 AAS1
2711osw-m4_A_G12_G13NANNANT00.69 AA05
2721osw-m5_A_G12_G13NANNANT01.24 OPS1
2731osw-m6_A_G12_G13NANNANT00.70 AA05
2741osw-m7_A_G12_G13NANNANT00.64 AA05
2751osw-m8_A_G12_G13NANNANT01.03 OPS1
2761osw-m9_A_G12_G13NANNANT00.60 AA05
2771osw-m10_A_G13_C14AAAAA00810.17 AA00
2781osw-m11_A_G13_C14AAAAA00930.13 AA00
2791osw-m12_A_G13_C14AAAAA00850.23 AA00
2801osw-m13_A_G13_C14AAwAA01630.22 AA01
2811osw-m14_A_G13_C14AAAAA00770.19 AA00
2821osw-m15_A_G13_C14AAAAA00850.17 AA00
2831osw-m16_A_G13_C14AAAAA00840.20 AA00
2841osw-m17_A_G13_C14AAwAA01800.24 AA01
2851osw-m18_A_G13_C14NANNANT00.42 AA01
2861osw-m19_A_G13_C14AAAAA00910.13 AA00
2871osw-m1_A_G13_C14NANNANT00.51 AA01
2881osw-m20_A_G13_C14AAAAA00870.20 AA00
2891osw-m21_A_G13_C14AAwAA01930.17 AA01
2901osw-m22_A_G13_C14AAAAA00880.14 AA00
2911osw-m23_A_G13_C14NANNANT00.46 AA01
2921osw-m2_A_G13_C14AAwAA01600.25 AA01
2931osw-m3_A_G13_C14AAwAA01930.19 AA01
2941osw-m4_A_G13_C14AAAAA00840.19 AA00
2951osw-m5_A_G13_C14AAwAA01910.22 AA01
2961osw-m6_A_G13_C14AAAAA00610.21 AA00
2971osw-m7_A_G13_C14AAAAA00750.23 AA00
2981osw-m8_A_G13_C14AAAAA00660.20 AA00
2991osw-m9_A_G13_C14NANNANT01.32 OP24
3001osw-m10_A_C14_G15AAAAA00760.19 AA00
3011osw-m11_A_C14_G15AAAAA00900.11 AA00
3021osw-m12_A_C14_G15AAwAA01810.25 AA01
3031osw-m13_A_C14_G15NANNANT00.54 AA01
3041osw-m14_A_C14_G15AAAAA00820.17 AA00
3051osw-m15_A_C14_G15AAwAA01910.15 AA01
3061osw-m16_A_C14_G15AAwAA01920.15 AA01
3071osw-m17_A_C14_G15AAAAA00860.21 AA00
3081osw-m18_A_C14_G15NANNANT00.79 BA10
3091osw-m19_A_C14_G15AAAAA00810.16 AA00
3101osw-m1_A_C14_G15NANNANT00.98 BA10
3111osw-m20_A_C14_G15AAAAA00850.14 AA00
3121osw-m21_A_C14_G15AAAAA00910.18 AA00
3131osw-m22_A_C14_G15AAwAA01870.17 AA01
3141osw-m23_A_C14_G15NANNANT00.96 BA10
3151osw-m2_A_C14_G15AAwAA01130.46 AA01
3161osw-m3_A_C14_G15AAAAA00650.32 AA00
3171osw-m4_A_C14_G15AAwAA01780.21 AA01
3181osw-m5_A_C14_G15AAAAA00880.17 AA00
3191osw-m6_A_C14_G15AAwAA01620.33 AA01
3201osw-m7_A_C14_G15AAAAA00730.26 AA00
3211osw-m8_A_C14_G15AAwAA01880.17 AA01
3221osw-m9_A_C14_G15AAAAA00910.12 AA00
3231osw-m10_A_G15_A16AAAAA00880.18 AA00
3241osw-m11_A_G15_A16AAAAA00890.11 AA00
3251osw-m12_A_G15_A16AAAAA00420.32 AA00
3261osw-m13_A_G15_A16AAwAA01420.44 AA01
3271osw-m14_A_G15_A16AAAAA00830.24 AA00
3281osw-m15_A_G15_A16AAAAA00860.16 AA00
3291osw-m16_A_G15_A16AAAAA00870.20 AA00
3301osw-m17_A_G15_A16AAAAA00880.12 AA00
3311osw-m18_A_G15_A16AAwAA01540.38 AA01
3321osw-m19_A_G15_A16AAAAA00830.18 AA00
3331osw-m1_A_G15_A16AAwAA01570.31 AA01
3341osw-m20_A_G15_A16AAAAA00840.15 AA00
3351osw-m21_A_G15_A16AAwAA01870.28 AA01
3361osw-m22_A_G15_A16AAwAA01460.39 AA01
3371osw-m23_A_G15_A16AAAAA00770.21 AA00
3381osw-m2_A_G15_A16AAwAA01660.33 AA01
3391osw-m3_A_G15_A16AAwAA01470.40 AA01
3401osw-m4_A_G15_A16AAwAA01650.35 AA01
3411osw-m5_A_G15_A16AAwAA01670.35 AA01
3421osw-m6_A_G15_A16AAAAA00730.27 AA00
3431osw-m7_A_G15_A16AAAAA00830.17 AA00
3441osw-m8_A_G15_A16AAAAA00340.37 AA00
3451osw-m9_A_G15_A16AAwAA01930.20 AA01
3461osw-m10_A_A16_G17NANNANT00.51 AB2S
3471osw-m11_A_A16_G17AAwAA01840.20 AA01
3481osw-m12_A_A16_G17AAwAA01870.33 AA01
3491osw-m13_A_A16_G17NANNANT01.14 OP04
3501osw-m14_A_A16_G17AAwAA01720.26 AA01
3511osw-m15_A_A16_G17NANNANT01.26 OP08
3521osw-m16_A_A16_G17AAwAA01890.17 AA01
3531osw-m17_A_A16_G17AAwAA06510.64 AA06
3541osw-m18_A_A16_G17NANNANT00.97 OP04
3551osw-m19_A_A16_G17AAwAA01480.29 AA01
3561osw-m1_A_A16_G17AAwAA01690.33 AA01
3571osw-m20_A_A16_G17AAwAA01690.33 AA01
3581osw-m21_A_A16_G17NANNANT01.10 AA10
3591osw-m22_A_A16_G17AAAAA00610.36 AA00
3601osw-m23_A_A16_G17AAAAA00710.30 AA00
3611osw-m2_A_A16_G17AAwAA01870.32 AA01
3621osw-m3_A_A16_G17AAwAA11660.32 AA11
3631osw-m4_A_A16_G17NANNANT01.13 OP04
3641osw-m5_A_A16_G17NANNANT01.08 OP04
3651osw-m6_A_A16_G17AAAAA00700.34 AA00
3661osw-m7_A_A16_G17AAwAA06610.36 AA06
3671osw-m8_A_A16_G17AAwAA01840.22 AA01
3681osw-m9_A_A16_G17AAAAA00610.40 AA00
3691osw-m10_A_G17_G18NANNANT01.34 AAS1
3701osw-m11_A_G17_G18NANNANT00.73 IC03
3711osw-m12_A_G17_G18NANNANT01.53 AB04
3721osw-m13_A_G17_G18NANNANT00.78 OP12
3731osw-m14_A_G17_G18NANNANT00.37 AA01
3741osw-m15_A_G17_G18NANNANT02.10 IC03
3751osw-m16_A_G17_G18NANNANT01.07 AA01
3761osw-m17_A_G17_G18NANNANT00.71 IC03
3771osw-m18_A_G17_G18NANNANT00.37 OP12
3781osw-m19_A_G17_G18NANNANT00.48 AA01
3791osw-m1_A_G17_G18NANNANT01.08 OP09
3801osw-m20_A_G17_G18NANNANT01.19 BB12
3811osw-m21_A_G17_G18NANNANT01.27 BA13
3821osw-m22_A_G17_G18NANNANT00.49 AA01
3831osw-m23_A_G17_G18NANNANT00.48 AA01
3841osw-m2_A_G17_G18NANNANT01.20 IC04
3851osw-m3_A_G17_G18AAwAA01130.30 AA01
3861osw-m4_A_G17_G18NANNANT00.64 OP12
3871osw-m5_A_G17_G18NANNANT00.93 OP20
3881osw-m6_A_G17_G18NANNANT00.48 AA01
3891osw-m7_A_G17_G18NANNANT01.10 IC03
3901osw-m8_A_G17_G18NANNANT00.50 AA01
3911osw-m9_A_G17_G18A-BAB05500.16 AB05
3921osw-m10_A_G18_C19NANNANT02.06 IC02
3931osw-m11_A_G18_C19NANNANT00.94 ZZ02
3941osw-m12_A_G18_C19NANNANT00.94 OP12
3951osw-m13_A_G18_C19NANNANT01.15 ZZ02
3961osw-m14_A_G18_C19NANNANT01.10 ZZ02
3971osw-m15_A_G18_C19NANNANT01.20 AB02
3981osw-m16_A_G18_C19AAAAA00690.34 AA00
3991osw-m17_A_G18_C19NANNANT00.81 OP03
4001osw-m18_A_G18_C19NANNANT01.11 OP24
4011osw-m19_A_G18_C19NANNANT01.12 ZZ02
4021osw-m1_A_G18_C19NANNANT01.14 AB02
4031osw-m20_A_G18_C19NANNANT01.31 AA11
4041osw-m21_A_G18_C19AAwAA01680.29 AA01
4051osw-m22_A_G18_C19NANNANT01.05 ZZ02
4061osw-m23_A_G18_C19NANNANT01.21 ZZ02
4071osw-m2_A_G18_C19NANNANT01.63 AA11
4081osw-m3_A_G18_C19AAwAA01610.34 AA01
4091osw-m4_A_G18_C19NANNANT00.96 ZZ02
4101osw-m5_A_G18_C19NANNANT01.11 ZZ02
4111osw-m6_A_G18_C19NANNANT01.15 ZZ02
4121osw-m7_A_G18_C19NANNANT01.10 BA16
4131osw-m8_A_G18_C19NANNANT01.21 ZZ02
4141osw-m9_A_G18_C19NANNANT01.06 ZZ02
4151osw-m10_A_C19_U20AAAAA00770.17 AA00
4161osw-m11_A_C19_U20AAAAA00780.18 AA00
4171osw-m12_A_C19_U20AAAAA00660.21 AA00
4181osw-m13_A_C19_U20AAAAA00920.16 AA00
4191osw-m14_A_C19_U20AAAAA00810.29 AA00
4201osw-m15_A_C19_U20AAAAA02120.43 AA02
4211osw-m16_A_C19_U20AAAAA00800.20 AA00
4221osw-m17_A_C19_U20AAwAA11660.38 AA11
4231osw-m18_A_C19_U20AAAAA00860.22 AA00
4241osw-m19_A_C19_U20AAAAA00820.22 AA00
4251osw-m1_A_C19_U20AAAAA00150.21 AA00
4261osw-m20_A_C19_U20AAAAA00130.35 AA00
4271osw-m21_A_C19_U20AAAAA00930.16 AA00
4281osw-m22_A_C19_U20AAAAA00860.21 AA00
4291osw-m23_A_C19_U20AAAAA00890.21 AA00
4301osw-m2_A_C19_U20AAAAA00370.21 AA00
4311osw-m3_A_C19_U20AAwAA01830.21 AA01
4321osw-m4_A_C19_U20AAAAA00840.26 AA00
4331osw-m5_A_C19_U20AAAAA00870.18 AA00
4341osw-m6_A_C19_U20AAAAA00880.26 AA00
4351osw-m7_A_C19_U20NANNANT00.68 AA11
4361osw-m8_A_C19_U20AAAAA00880.22 AA00
4371osw-m9_A_C19_U20AAAAA00910.16 AA00
4381osw-m10_A_U20_C21AAAAA00850.17 AA00
4391osw-m11_A_U20_C21AAAAA00800.20 AA00
4401osw-m12_A_U20_C21AAAAA00820.18 AA00
4411osw-m13_A_U20_C21AAAAA00810.19 AA00
4421osw-m14_A_U20_C21AAAAA00870.17 AA00
4431osw-m15_A_U20_C21AAAAA00840.17 AA00
4441osw-m16_A_U20_C21AAAAA00840.18 AA00
4451osw-m17_A_U20_C21AAAAA00800.28 AA00
4461osw-m18_A_U20_C21AAAAA00900.16 AA00
4471osw-m19_A_U20_C21AAAAA00870.16 AA00
4481osw-m1_A_U20_C21AAAAA00830.16 AA00
4491osw-m20_A_U20_C21AAAAA00830.18 AA00
4501osw-m21_A_U20_C21AAAAA00880.19 AA00
4511osw-m22_A_U20_C21AAAAA00830.19 AA00
4521osw-m23_A_U20_C21AAAAA00890.16 AA00
4531osw-m2_A_U20_C21AAAAA00760.18 AA00
4541osw-m3_A_U20_C21AAAAA00850.18 AA00
4551osw-m4_A_U20_C21AAAAA00730.23 AA00
4561osw-m5_A_U20_C21AAAAA00840.17 AA00
4571osw-m6_A_U20_C21AAAAA00870.16 AA00
4581osw-m7_A_U20_C21NANNANT00.49 AA01
4591osw-m8_A_U20_C21NANNANT00.37 AA01
4601osw-m9_A_U20_C21AAAAA00830.19 AA00
4611osw-m10_A_C21_C22AAAAA00870.17 AA00
4621osw-m11_A_C21_C22AAAAA00740.21 AA00
4631osw-m12_A_C21_C22AAAAA00890.14 AA00
4641osw-m13_A_C21_C22AAAAA00720.21 AA00
4651osw-m14_A_C21_C22AAAAA00890.15 AA00
4661osw-m15_A_C21_C22AAAAA00850.17 AA00
4671osw-m16_A_C21_C22AAAAA00870.16 AA00
4681osw-m17_A_C21_C22AAwAA01820.35 AA01
4691osw-m18_A_C21_C22AAAAA00740.21 AA00
4701osw-m19_A_C21_C22AAAAA00890.15 AA00
4711osw-m1_A_C21_C22AAAAA00870.15 AA00
4721osw-m20_A_C21_C22AAAAA00850.16 AA00
4731osw-m21_A_C21_C22AAwAA01790.24 AA01
4741osw-m22_A_C21_C22AAAAA00870.19 AA00
4751osw-m23_A_C21_C22AAAAA00880.15 AA00
4761osw-m2_A_C21_C22AAAAA00530.19 AA00
4771osw-m3_A_C21_C22AAAAA00710.24 AA00
4781osw-m4_A_C21_C22AAwAA01860.32 AA01
4791osw-m5_A_C21_C22AAAAA00760.23 AA00
4801osw-m6_A_C21_C22AAAAA00850.15 AA00
4811osw-m7_A_C21_C22NANNANT01.18 BA10
4821osw-m8_A_C21_C22NANNANT00.53 AA01
4831osw-m9_A_C21_C22AAAAA00850.16 AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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Color by NtC (balls)

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IC

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Z

N