DNATCO v4.1: results

Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA

Results of the assignment of 57 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1oln_C_G1051_C1052	AAA	AA00	80	0.15	AA00
02	1oln_C_C1052_U1053	AAA	AA00	96	0.09	AA00
03	1oln_C_U1053_G1054	AAA	AA00	95	0.15	AA00
04	1oln_C_G1054_G1055	AAA	AA00	89	0.20	AA00
05	1oln_C_G1055_G1056	AAA	AA00	18	0.44	AA00
06	1oln_C_G1056_A1057	OPN	OP01	63	0.27	OP01
07	1oln_C_A1057_U1058	AAA	AA00	21	0.36	AA00
08	1oln_C_U1058_G1059	AAA	AA00	65	0.26	AA00
09	1oln_C_G1059_U1060	ZZZ	ZZ01	60	0.33	ZZ01
10	1oln_C_U1060_U1061	OPN	OP18	93	0.16	OP18
11	1oln_C_U1061_G1062	OPN	OP13	19	0.39	OP13
12	1oln_C_G1062_G1063	AAA	AA00	47	0.26	AA00
13	1oln_C_G1063_C1064	AAA	AA00	88	0.29	AA00
14	1oln_C_C1064_U1065	AAA	AA00	33	0.42	AA00
15	1oln_C_U1065_U1066	AAA	AA00	60	0.35	AA00
16	1oln_C_U1066_A1067	OPN	OP04	85	0.11	OP04
17	1oln_C_A1067_G1068	AAA	AA00	64	0.33	AA00
18	1oln_C_G1068_A1069	NAN	NANT	0	0.43	AB05
19	1oln_C_A1069_A1070	NAN	NANT	0	0.79	OP19
20	1oln_C_A1070_G1071	NAN	NANT	0	1.18	OP05
21	1oln_C_G1071_C1072	AAA	AA00	72	0.25	AA00
22	1oln_C_C1072_A1073	NAN	NANT	0	0.33	OP30
23	1oln_C_A1073_G1074	AAA	AA00	52	0.43	AA00
24	1oln_C_G1074_C1075	AAA	AA00	88	0.15	AA00
25	1oln_C_C1075_C1076	AAA	AA00	92	0.17	AA00
26	1oln_C_C1076_A1077	AAA	AA00	90	0.22	AA00
27	1oln_C_A1077_U1078	AAA	AA00	49	0.39	AA00
28	1oln_C_U1078_C1079	NAN	NANT	0	1.56	OP24
29	1oln_C_C1079_A1080	AAA	AA00	68	0.28	AA00
30	1oln_C_A1080_U1081	AAA	AA00	58	0.28	AA00
31	1oln_C_U1081_U1082	AAA	AA00	75	0.26	AA00
32	1oln_C_U1082_U1083	AAw	AA01	62	0.33	AA01
33	1oln_C_U1083_A1084	OPN	OP04	75	0.14	OP04
34	1oln_C_A1084_A1085	AAA	AA09	80	0.17	AA09
35	1oln_C_A1085_A1086	NAN	NANT	0	0.45	AB2S
36	1oln_C_A1086_G1087	NAN	NANT	0	0.54	OP28
37	1oln_C_G1087_A1088	NAN	NANT	0	0.93	OP17
38	1oln_C_A1088_G1089	NAN	NANT	0	0.97	OP15
39	1oln_C_G1089_U1090	NAN	NANT	0	0.81	OP26
40	1oln_C_U1090_G1091	AAA	AA00	82	0.19	AA00
41	1oln_C_G1091_C1092	AAA	AA00	84	0.27	AA00
42	1oln_C_C1092_G1093	AAA	AA00	22	0.52	AA00
43	1oln_C_G1093_U1094	AAA	AA00	36	0.37	AA00
44	1oln_C_U1094_A1095	OPN	OP04	78	0.17	OP04
45	1oln_C_A1095_A1096	AAA	AA00	58	0.34	AA00
46	1oln_C_A1096_C1097	AAw	AA01	55	0.25	AA01
47	1oln_C_C1097_A1098	NAN	NANT	0	0.77	AA08
48	1oln_C_A1098_G1099	AAA	AA08	15	0.47	AA08
49	1oln_C_G1099_C1100	AAA	AA00	87	0.13	AA00
50	1oln_C_C1100_U1101	AAA	AA00	81	0.34	AA00
51	1oln_C_U1101_C1102	AAA	AA00	95	0.15	AA00
52	1oln_C_C1102_A1103	AAA	AA00	75	0.28	AA00
53	1oln_C_A1103_C1104	AAA	AA08	32	0.48	AA08
54	1oln_C_C1104_C1105	AAA	AA00	92	0.15	AA00
55	1oln_C_C1105_A1106	AAA	AA00	94	0.12	AA00
56	1oln_C_A1106_G1107	AAA	AA00	85	0.14	AA00
57	1oln_C_G1107_C1108	AAA	AA00	64	0.14	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 57 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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