DNATCO v4.1: results

Structure of the L1 protuberance in the ribosome

Results of the assignment of 54 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1mzp_B_G1_G2	AAA	AA00	62	0.23	AA00
02	1mzp_B_G2_G3	AAA	AA00	84	0.17	AA00
03	1mzp_B_G3_A4	AAw	AA01	88	0.13	AA01
04	1mzp_B_A4_U5	AAA	AA08	73	0.30	AA08
05	1mzp_B_U5_G6	A-B	AB04	68	0.34	AB04
06	1mzp_B_G6_C7	NAN	NANT	0	0.49	OP20
07	1mzp_B_C7_G8	NAN	NANT	0	0.68	OP13
08	1mzp_B_G8_U9	AAA	AA08	83	0.24	AA08
09	1mzp_B_U9_A10	AAA	AA00	82	0.30	AA00
10	1mzp_B_A10_G11	AAA	AA00	16	0.49	AA00
11	1mzp_B_G11_G12	NAN	NANT	0	1.23	OP17
12	1mzp_B_G12_A13	NAN	NANT	0	2.01	OP24
13	1mzp_B_A13_U14	NAN	NANT	0	0.88	OP05
14	1mzp_B_U14_A15	NAN	NANT	0	0.71	OP13
15	1mzp_B_A15_G16	OPN	OP14	43	0.40	OP14
16	1mzp_B_G16_G17	AAw	AA01	64	0.22	AA01
17	1mzp_B_G17_U18	AAA	AA08	88	0.17	AA08
18	1mzp_B_U18_G19	AAA	AA00	75	0.18	AA00
19	1mzp_B_G19_G20	AAA	AA00	88	0.14	AA00
20	1mzp_B_G20_G21	AAA	AA00	15	0.48	AA00
21	1mzp_B_G21_A22	NAN	NANT	0	0.44	AA07
22	1mzp_B_A22_G23	NAN	NANT	0	1.33	AA01
23	1mzp_B_G23_C24	AAA	AA00	72	0.22	AA00
24	1mzp_B_C24_C25	AAA	AA00	73	0.21	AA00
25	1mzp_B_C25_G26	AAA	AA00	76	0.30	AA00
26	1mzp_B_G26_C27	OPN	OP04	82	0.29	OP04
27	1mzp_B_C27_A28	AAA	AA08	70	0.42	AA08
28	1mzp_B_A28_A29	AAA	AA00	62	0.28	AA00
29	1mzp_B_A29_G30	AAA	AA08	23	0.59	AA08
30	1mzp_B_G30_G31	AAA	AA00	91	0.10	AA00
31	1mzp_B_G31_C32	AAA	AA00	89	0.15	AA00
32	1mzp_B_C32_G33	AAA	AA00	76	0.17	AA00
33	1mzp_B_G33_C34	AAA	AA00	76	0.25	AA00
34	1mzp_B_C34_C35	AAA	AA04	24	0.66	AA04
35	1mzp_B_C35_G36	AAA	AA08	81	0.35	AA08
36	1mzp_B_G36_G37	AAA	AA08	80	0.32	AA08
37	1mzp_B_G37_U38	AAA	AA00	83	0.19	AA00
38	1mzp_B_U38_G39	AAA	AA00	66	0.28	AA00
39	1mzp_B_G39_A40	OPN	OP04	82	0.17	OP04
40	1mzp_B_A40_A41	AAA	AA00	51	0.29	AA00
41	1mzp_B_A41_A42	NAN	NANT	0	0.46	AB04
42	1mzp_B_A42_U43	NAN	NANT	0	0.41	AB02
43	1mzp_B_U43_A44	NAN	NANT	0	1.46	OP16
44	1mzp_B_A44_C45	AAA	AA08	17	0.54	AA08
45	1mzp_B_C45_C46	AAA	AA08	71	0.21	AA08
46	1mzp_B_C46_A47	AAw	AA01	91	0.15	AA01
47	1mzp_B_A47_C48	AAA	AA00	83	0.15	AA00
48	1mzp_B_C48_C49	AAA	AA00	82	0.20	AA00
49	1mzp_B_C49_C50	AAw	AA01	82	0.24	AA01
50	1mzp_B_C50_U51	AAA	AA08	27	0.32	AA08
51	1mzp_B_U51_U52	AAA	AA00	80	0.23	AA00
52	1mzp_B_U52_C53	AAA	AA00	92	0.15	AA00
53	1mzp_B_C53_C54	AAA	AA00	85	0.17	AA00
54	1mzp_B_C54_C55	AAA	AA00	16	0.32	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 54 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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