DNATCO v4.1: results

Crystal Structure of the SRP19-7S.S SRP RNA Complex of M. jannaschii

Results of the assignment of 96 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1lng_B_U140_C141	NAN	NANT	0	0.41	AA05
02	1lng_B_C141_G142	NAN	NANT	0	0.69	AA04
03	1lng_B_G142_G143	AAA	AA00	70	0.28	AA00
04	1lng_B_G143_C144	AAw	AA06	93	0.17	AA06
05	1lng_B_C144_G145	AAA	AA08	48	0.27	AA08
06	1lng_B_G145_G146	AAw	AA11	76	0.38	AA11
07	1lng_B_G146_U147	NAN	NANT	0	1.26	AA13
08	1lng_B_U147_G148	AAw	AA06	53	0.55	AA06
09	1lng_B_G148_G149	AAA	AA08	83	0.17	AA08
10	1lng_B_G149_G150	AAA	AA00	74	0.26	AA00
11	1lng_B_G150_G151	AAw	AA06	9	0.38	AA06
12	1lng_B_G151_G152	AAA	AA00	60	0.30	AA00
13	1lng_B_G152_A153	AAw	AA01	17	0.32	AA01
14	1lng_B_A153_G154	AAA	AA08	41	0.44	AA08
15	1lng_B_G154_C155	AAA	AA00	63	0.23	AA00
16	1lng_B_C155_A156	AAA	AA00	50	0.28	AA00
17	1lng_B_A156_U157	AAA	AA00	69	0.14	AA00
18	1lng_B_U157_C158	AAA	AA00	59	0.16	AA00
19	1lng_B_C158_U159	AAA	AA00	84	0.18	AA00
20	1lng_B_U159_C160	AAA	AA04	84	0.27	AA04
21	1lng_B_C160_C161	AAA	AA00	89	0.17	AA00
22	1lng_B_C161_U162	AAA	AA00	57	0.37	AA00
23	1lng_B_U162_G163	AAA	AA00	68	0.25	AA00
24	1lng_B_G163_U164	NAN	NANT	0	0.96	OP17
25	1lng_B_U164_A165	NAN	NANT	0	1.85	IC07
26	1lng_B_A165_G166	AAA	AA08	51	0.47	AA08
27	1lng_B_G166_G167	NAN	NANT	0	0.61	AA05
28	1lng_B_G167_G168	AAA	AA00	29	0.35	AA00
29	1lng_B_G168_G169	AAw	AA01	65	0.23	AA01
30	1lng_B_G169_A170	AAA	AA00	65	0.23	AA00
31	1lng_B_A170_G171	AAA	AA00	95	0.14	AA00
32	1lng_B_G171_A172	AAA	AA00	84	0.19	AA00
33	1lng_B_A172_U173	AAA	AA04	80	0.15	AA04
34	1lng_B_U173_G174	NAN	NANT	0	0.68	AA11
35	1lng_B_G174_U175	AAw	AA01	18	0.33	AA01
36	1lng_B_U175_A176	NAN	NANT	0	2.12	OP17
37	1lng_B_A176_A177	NAN	NANT	0	0.84	AB04
38	1lng_B_A177_C178	NAN	NANT	0	1.84	OP10
39	1lng_B_C178_C179	NAN	NANT	0	0.99	BA09
40	1lng_B_C179_C180	NAN	NANT	0	0.52	AA10
41	1lng_B_C180_C181	NAN	NANT	0	0.62	AA11
42	1lng_B_C181_C182	NAN	NANT	0	0.48	AA00
43	1lng_B_C182_U183	NAN	NANT	0	0.63	AA03
44	1lng_B_U183_U184	NAN	NANT	0	0.68	AA11
45	1lng_B_U184_U185	NAN	NANT	0	1.69	IC07
46	1lng_B_U185_A186	NAN	NANT	0	0.92	BB1S
47	1lng_B_A186_C187	NAN	NANT	0	1.34	BB11
48	1lng_B_C187_C188	AAA	AA08	72	0.21	AA08
49	1lng_B_C188_U189	NAN	NANT	0	0.35	AA01
50	1lng_B_U189_G190	AAw	AA11	25	0.39	AA11
51	1lng_B_G190_C191	AAA	AA08	87	0.28	AA08
52	1lng_B_C191_C192	AAw	AA01	63	0.32	AA01
53	1lng_B_C192_G193	NAN	NANT	0	0.72	AA04
54	1lng_B_G193_A194	OPN	OP08	8	0.26	OP08
55	1lng_B_A194_A195	NAN	NANT	0	1.78	OP17
56	1lng_B_A195_C196	NAN	NANT	0	0.87	OP23
57	1lng_B_C196_C197	NAN	NANT	0	0.88	ZZ01
58	1lng_B_C197_C198	NAN	NANT	0	1.33	OP29
59	1lng_B_C198_C199	AAA	AA00	80	0.21	AA00
60	1lng_B_C199_G200	AAA	AA00	84	0.21	AA00
61	1lng_B_G200_C201	AAA	AA08	58	0.42	AA08
62	1lng_B_C201_C202	AAA	AA00	77	0.23	AA00
63	1lng_B_C202_A203	AAu	AA13	59	0.25	AA13
64	1lng_B_A203_G204	AAA	AA08	37	0.40	AA08
65	1lng_B_G204_G205	AAA	AA08	76	0.31	AA08
66	1lng_B_G205_C206	AAA	AA00	79	0.26	AA00
67	1lng_B_C206_C207	AAA	AA04	85	0.22	AA04
68	1lng_B_C207_C208	AAA	AA08	44	0.34	AA08
69	1lng_B_C208_G209	AAA	AA00	69	0.29	AA00
70	1lng_B_G209_G210	OPN	OP03	94	0.12	OP03
71	1lng_B_G210_A211	AAA	AA08	46	0.39	AA08
72	1lng_B_A211_A212	AAA	AA00	59	0.32	AA00
73	1lng_B_A212_G213	AAw	AA10	15	0.63	AA10
74	1lng_B_G213_G214	AAw	AA01	67	0.27	AA01
75	1lng_B_G214_G215	AAA	AA00	70	0.23	AA00
76	1lng_B_G215_A216	AAA	AA08	86	0.23	AA08
77	1lng_B_A216_G217	AAA	AA08	67	0.47	AA08
78	1lng_B_G217_C218	AAu	AA12	86	0.46	AA12
79	1lng_B_C218_A219	AAA	AA00	83	0.21	AA00
80	1lng_B_A219_A220	AAA	AA00	61	0.36	AA00
81	1lng_B_A220_C221	AAA	AA00	50	0.39	AA00
82	1lng_B_C221_G222	AAA	AA03	83	0.28	AA03
83	1lng_B_G222_G223	NAN	NANT	0	0.45	AA06
84	1lng_B_G223_U224	AAw	AA01	16	0.34	AA01
85	1lng_B_U224_A225	AAA	AA00	63	0.26	AA00
86	1lng_B_A225_G226	NAN	NANT	0	0.68	AA04
87	1lng_B_G226_G227	NAN	NANT	0	0.45	AA06
88	1lng_B_G227_C228	AAA	AA04	63	0.41	AA04
89	1lng_B_C228_A229	AAw	AA06	85	0.27	AA06
90	1lng_B_A229_G230	NAN	NANT	0	0.80	AA10
91	1lng_B_G230_G231	NAN	NANT	0	0.44	AA00
92	1lng_B_G231_A232	NAN	NANT	0	1.24	IC03
93	1lng_B_A232_C233	NAN	NANT	0	1.31	AA04
94	1lng_B_C233_G234	NAN	NANT	0	0.74	AB04
95	1lng_B_G234_U235	NAN	NANT	0	0.46	AA01
96	1lng_B_U235_C236	AAA	AA04	50	0.52	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 96 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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