DNATCO v4.1: results

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1lc4_A_G3_C4	AAA	AA00	83	0.16	AA00
02	1lc4_A_C4_G5	AAA	AA00	74	0.23	AA00
03	1lc4_A_G5_U6	AAw	AA01	78	0.40	AA01
04	1lc4_A_U6_C7	AAA	AA00	37	0.48	AA00
05	1lc4_A_C7_A8	AAA	AA00	87	0.23	AA00
06	1lc4_A_A8_C9	AAA	AA00	77	0.23	AA00
07	1lc4_A_C9_A10	AAA	AA00	80	0.15	AA00
08	1lc4_A_A10_C11	AAA	AA00	86	0.28	AA00
09	1lc4_A_C11_C12	AAA	AA00	72	0.26	AA00
10	1lc4_A_C12_G13	AAA	AA00	93	0.14	AA00
11	1lc4_A_G13_G14	AAA	AA00	91	0.18	AA00
12	1lc4_A_G14_U15	AAA	AA08	82	0.19	AA08
13	1lc4_A_U15_G16	AAA	AA00	88	0.16	AA00
14	1lc4_A_G16_A17	NAN	NANT	0	1.90	OP17
15	1lc4_A_A17_A18	AAA	AA00	60	0.21	AA00
16	1lc4_A_A18_G19	NAN	NANT	0	0.83	OP11
17	1lc4_A_G19_U20	AAA	AA00	50	0.32	AA00
18	1lc4_A_U20_C21	AAA	AA00	63	0.22	AA00
19	1lc4_A_C21_G22	AAA	AA00	87	0.16	AA00
20	1lc4_A_G22_C23	AAA	AA00	90	0.29	AA00
21	1lc4_B_G26_C27	AAA	AA00	87	0.21	AA00
22	1lc4_B_C27_G28	AAA	AA00	92	0.15	AA00
23	1lc4_B_G28_U29	NAN	NANT	0	0.84	AA11
24	1lc4_B_U29_C30	AAw	AA01	34	0.40	AA01
25	1lc4_B_C30_A31	AAA	AA08	80	0.23	AA08
26	1lc4_B_A31_C32	AAA	AA00	75	0.22	AA00
27	1lc4_B_C32_A33	AAA	AA00	94	0.11	AA00
28	1lc4_B_A33_C34	AAA	AA00	78	0.15	AA00
29	1lc4_B_C34_C35	AAA	AA00	91	0.12	AA00
30	1lc4_B_C35_G36	AAA	AA00	86	0.14	AA00
31	1lc4_B_G36_G37	AAw	AA01	93	0.15	AA01
32	1lc4_B_G37_U38	AAA	AA00	73	0.18	AA00
33	1lc4_B_U38_G39	AAA	AA00	86	0.21	AA00
34	1lc4_B_G39_A40	NAN	NANT	0	0.92	OP14
35	1lc4_B_A40_A41	AAA	AA09	94	0.18	AA09
36	1lc4_B_A41_G42	NAN	NANT	0	0.85	OP11
37	1lc4_B_G42_U43	AAA	AA08	74	0.25	AA08
38	1lc4_B_U43_C44	AAA	AA00	83	0.11	AA00
39	1lc4_B_C44_G45	AAA	AA00	72	0.16	AA00
40	1lc4_B_G45_C46	AAA	AA00	85	0.20	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

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