DNATCO v4.1: results

CRYSTAL STRUCTURE OF SRP19 IN COMPLEX WITH THE S DOMAIN OF SIGNAL RECOGNITION PARTICLE RNA

Results of the assignment of 124 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1l9a_B_G112_A113	AAA	AA00	58	0.31	AA00
002	1l9a_B_A113_C114	AAA	AA00	82	0.15	AA00
003	1l9a_B_C114_A115	AAw	AA01	67	0.24	AA01
004	1l9a_B_A115_C116	AAw	AA11	69	0.33	AA11
005	1l9a_B_C116_U117	AAA	AA08	20	0.36	AA08
006	1l9a_B_U117_A118	NAN	NANT	0	0.58	AA10
007	1l9a_B_A118_A119	AAw	AA06	59	0.59	AA06
008	1l9a_B_A119_G120	AAA	AA00	13	0.34	AA00
009	1l9a_B_G120_U121	NAN	NANT	0	0.56	AA10
010	1l9a_B_U121_U122	AAA	AA08	62	0.44	AA08
011	1l9a_B_U122_C123	AAw	AA01	54	0.39	AA01
012	1l9a_B_C123_G124	AAw	AA01	55	0.31	AA01
013	1l9a_B_G124_G125	AAA	AA00	18	0.45	AA00
014	1l9a_B_G125_C126	AAw	AA06	88	0.22	AA06
015	1l9a_B_C126_A127	AAA	AA00	52	0.23	AA00
016	1l9a_B_A127_U128	AAw	AA06	63	0.59	AA06
017	1l9a_B_U128_C129	NAN	NANT	0	1.00	OP06
018	1l9a_B_C129_A130	AAA	AA00	85	0.15	AA00
019	1l9a_B_A130_A131	AAA	AA00	18	0.31	AA00
020	1l9a_B_A131_U132	AAw	AA01	56	0.25	AA01
021	1l9a_B_U132_A133	NAN	NANT	0	0.69	AA10
022	1l9a_B_A133_U134	AAw	AA05	36	0.49	AA05
023	1l9a_B_U134_G135	AAA	AA08	19	0.41	AA08
024	1l9a_B_G135_G136	AAA	AA00	58	0.19	AA00
025	1l9a_B_G136_U137	AAA	AA00	90	0.13	AA00
026	1l9a_B_U137_G138	AAA	AA00	87	0.15	AA00
027	1l9a_B_G138_A139	AAw	AA06	58	0.35	AA06
028	1l9a_B_A139_C140	AAA	AA08	66	0.28	AA08
029	1l9a_B_C140_C141	AAA	AA00	71	0.29	AA00
030	1l9a_B_C141_U142	AAA	AA08	85	0.17	AA08
031	1l9a_B_U142_C143	AAA	AA00	59	0.26	AA00
032	1l9a_B_C143_C144	AAA	AA00	66	0.21	AA00
033	1l9a_B_C144_C145	AAA	AA00	59	0.24	AA00
034	1l9a_B_C145_G146	AAA	AA00	75	0.27	AA00
035	1l9a_B_G146_G147	AAA	AA00	78	0.20	AA00
036	1l9a_B_G147_G148	NAN	NANT	0	1.68	OP29
037	1l9a_B_G148_A149	AAw	AA01	40	0.62	AA01
038	1l9a_B_A149_G150	AAA	AA00	69	0.33	AA00
039	1l9a_B_G150_C151	NAN	NANT	0	0.55	AA05
040	1l9a_B_C151_G152	AAA	AA00	53	0.35	AA00
041	1l9a_B_G152_G153	AAA	AA00	63	0.18	AA00
042	1l9a_B_G153_G154	AAA	AA00	74	0.17	AA00
043	1l9a_B_G154_G155	AAA	AA00	71	0.25	AA00
044	1l9a_B_G155_G156	AAA	AA00	24	0.36	AA00
045	1l9a_B_G156_A157	AAA	AA00	74	0.21	AA00
046	1l9a_B_A157_C158	AAA	AA08	83	0.20	AA08
047	1l9a_B_C158_C159	AAA	AA08	84	0.19	AA08
048	1l9a_B_C159_A160	AAw	AA01	85	0.27	AA01
049	1l9a_B_A160_C161	AAA	AA08	92	0.23	AA08
050	1l9a_B_C161_C162	AAA	AA00	82	0.17	AA00
051	1l9a_B_C162_A163	AAw	AA01	57	0.24	AA01
052	1l9a_B_A163_G164	AAA	AA08	59	0.48	AA08
053	1l9a_B_G164_G165	AAu	AA12	31	0.52	AA12
054	1l9a_B_G165_U166	AAA	AA00	62	0.24	AA00
055	1l9a_B_U166_U167	AAA	AA00	81	0.28	AA00
056	1l9a_B_U167_G168	AAw	AA06	74	0.27	AA06
057	1l9a_B_G168_C169	NAN	NANT	0	1.26	AA01
058	1l9a_B_C169_C170	AAw	AA06	63	0.30	AA06
059	1l9a_B_C170_U171	NAN	NANT	0	0.67	OP05
060	1l9a_B_U171_A172	NAN	NANT	0	0.72	AA11
061	1l9a_B_G175_A176	NAN	NANT	0	1.59	OP06
062	1l9a_B_A176_G177	NAN	NANT	0	0.74	AA10
063	1l9a_B_G177_G178	AAA	AA00	23	0.33	AA00
064	1l9a_B_G178_G179	AAw	AA10	68	0.32	AA10
065	1l9a_B_G179_G180	AAA	AA08	86	0.24	AA08
066	1l9a_B_G180_U181	AAA	AA08	64	0.28	AA08
067	1l9a_B_U181_G182	NAN	NANT	0	0.74	AA08
068	1l9a_B_G182_A183	NAN	NANT	0	0.74	AB2S
069	1l9a_B_A183_A184	NAN	NANT	0	1.80	ZZ1S
070	1l9a_B_A184_C185	SYN	AAS1	81	0.32	AAS1
071	1l9a_B_C185_C186	AAA	AA00	36	0.21	AA00
072	1l9a_B_C186_G187	AAA	AA00	31	0.33	AA00
073	1l9a_B_G187_G188	NAN	NANT	0	0.74	AB2S
074	1l9a_B_G188_C189	SYN	AAS1	67	0.26	AAS1
075	1l9a_B_C189_C190	AAA	AA00	72	0.19	AA00
076	1l9a_B_C190_C191	AAA	AA08	26	0.46	AA08
077	1l9a_B_C191_A192	NAN	NANT	0	1.24	AA11
078	1l9a_B_A192_G193	AAA	AA08	60	0.34	AA08
079	1l9a_B_G193_G194	AAA	AA08	72	0.26	AA08
080	1l9a_B_G194_U195	AAA	AA00	72	0.31	AA00
081	1l9a_B_U195_C196	AAA	AA00	86	0.16	AA00
082	1l9a_B_C196_G197	AAA	AA00	16	0.32	AA00
083	1l9a_B_G197_G198	AAA	AA00	86	0.19	AA00
084	1l9a_B_G198_A199	OPN	OP04	45	0.22	OP04
085	1l9a_B_A199_A200	AAA	AA00	54	0.38	AA00
086	1l9a_B_A200_A201	AAw	AA01	21	0.37	AA01
087	1l9a_B_A201_C202	AAw	AA05	31	0.41	AA05
088	1l9a_B_C202_G203	AAA	AA00	80	0.17	AA00
089	1l9a_B_G203_G204	AAA	AA00	24	0.41	AA00
090	1l9a_B_G204_A205	AAA	AA00	66	0.21	AA00
091	1l9a_B_A205_G206	AAw	AA01	37	0.31	AA01
092	1l9a_B_G206_C207	AAw	AA01	34	0.38	AA01
093	1l9a_B_C207_A208	AAA	AA08	79	0.19	AA08
094	1l9a_B_A208_G209	AAA	AA00	33	0.41	AA00
095	1l9a_B_G209_G210	AAA	AA08	71	0.29	AA08
096	1l9a_B_G210_U211	AAA	AA08	72	0.17	AA08
097	1l9a_B_U211_C212	AAA	AA08	67	0.33	AA08
098	1l9a_B_C212_A213	AAA	AA00	82	0.16	AA00
099	1l9a_B_A213_A214	AAA	AA08	82	0.27	AA08
100	1l9a_B_A214_A215	NAN	NANT	0	0.53	BB2S
101	1l9a_B_A215_A216	SYN	AAS1	40	0.48	AAS1
102	1l9a_B_A216_C217	AAA	AA08	84	0.18	AA08
103	1l9a_B_C217_U218	AAw	AA01	64	0.18	AA01
104	1l9a_B_U218_C219	AAA	AA08	72	0.28	AA08
105	1l9a_B_C219_C220	AAA	AA03	84	0.30	AA03
106	1l9a_B_C220_C221	AAA	AA00	68	0.27	AA00
107	1l9a_B_C221_G222	AAA	AA00	28	0.39	AA00
108	1l9a_B_G222_U223	AAA	AA00	70	0.11	AA00
109	1l9a_B_U223_G224	AAw	AA01	70	0.17	AA01
110	1l9a_B_G224_C225	AAA	AA00	65	0.21	AA00
111	1l9a_B_C225_U226	AAA	AA00	58	0.25	AA00
112	1l9a_B_U226_G227	AAA	AA00	39	0.29	AA00
113	1l9a_B_G227_A228	AAA	AA00	86	0.19	AA00
114	1l9a_B_A228_U229	AAA	AA00	87	0.20	AA00
115	1l9a_B_U229_C230	NAN	NANT	0	0.72	AA11
116	1l9a_B_C230_A231	AAw	AA06	77	0.46	AA06
117	1l9a_B_A231_G232	AAw	AA06	32	0.72	AA06
118	1l9a_B_G232_U233	NAN	NANT	0	1.51	AA11
119	1l9a_B_U233_A234	NAN	NANT	0	1.10	AA01
120	1l9a_B_A234_G235	AAA	AA08	23	0.41	AA08
121	1l9a_B_G235_U236	AAA	AA08	59	0.47	AA08
122	1l9a_B_U236_G237	AAw	AA05	13	0.56	AA05
123	1l9a_B_G237_U238	AAA	AA08	34	0.35	AA08
124	1l9a_B_U238_CCC239	AAA	AA08	80	0.20	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 124 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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