DNATCO v4.1: results

Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA

Results of the assignment of 76 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1l3l_E_DG1_DA2	BBB	BB00	85	0.22	BB00
02	1l3l_E_DA2_DT3	BBw	BB02	78	0.15	BB02
03	1l3l_E_DT3_DG4	BBB	BB00	81	0.23	BB00
04	1l3l_E_DG4_DT5	BBB	BB00	86	0.25	BB00
05	1l3l_E_DT5_DG6	BBw	BB02	83	0.15	BB02
06	1l3l_E_DG6_DC7	BBB	BB00	83	0.22	BB00
07	1l3l_E_DC7_DA8	BB2	BB07	91	0.19	BB07
08	1l3l_E_DA8_DG9	BBB	BB00	89	0.17	BB00
09	1l3l_E_DG9_DA10	BBB	BB00	76	0.31	BB00
10	1l3l_E_DA10_DT11	BBw	BB02	74	0.20	BB02
11	1l3l_E_DT11_DC12	BBB	BB00	85	0.26	BB00
12	1l3l_E_DC12_DT13	BBB	BB00	93	0.14	BB00
13	1l3l_E_DT13_DG14	BBB	BB00	97	0.15	BB00
14	1l3l_E_DG14_DC15	BBw	BB02	83	0.20	BB02
15	1l3l_E_DC15_DA16	BBB	BB00	84	0.19	BB00
16	1l3l_E_DA16_DC17	BBw	BB02	98	0.00	BB02
17	1l3l_E_DC17_DA18	BBB	BB00	79	0.15	BB00
18	1l3l_E_DA18_DT19	BBB	BB00	84	0.19	BB00
19	1l3l_E_DT19_DC20	BBB	BB00	73	0.26	BB00
20	1l3l_F_DG101_DA102	BBB	BB00	90	0.19	BB00
21	1l3l_F_DA102_DT103	BBB	BB00	41	0.27	BB00
22	1l3l_F_DT103_DG104	BBB	BB00	75	0.29	BB00
23	1l3l_F_DG104_DT105	BBB	BB00	84	0.26	BB00
24	1l3l_F_DT105_DG106	BBw	BB02	52	0.23	BB02
25	1l3l_F_DG106_DC107	BBB	BB00	81	0.20	BB00
26	1l3l_F_DC107_DA108	BB2	BB07	96	0.20	BB07
27	1l3l_F_DA108_DG109	BBB	BB00	86	0.17	BB00
28	1l3l_F_DG109_DA110	BBB	BB00	75	0.32	BB00
29	1l3l_F_DA110_DT111	BBw	BB02	69	0.22	BB02
30	1l3l_F_DT111_DC112	BBB	BB00	86	0.25	BB00
31	1l3l_F_DC112_DT113	BBB	BB00	89	0.17	BB00
32	1l3l_F_DT113_DG114	BBB	BB00	97	0.16	BB00
33	1l3l_F_DG114_DC115	BBB	BB00	69	0.23	BB00
34	1l3l_F_DC115_DA116	BBw	BB02	62	0.31	BB02
35	1l3l_F_DA116_DC117	BBB	BB00	52	0.37	BB00
36	1l3l_F_DC117_DA118	BBB	BB00	76	0.26	BB00
37	1l3l_F_DA118_DT119	BBB	BB00	85	0.18	BB00
38	1l3l_F_DT119_DC120	BBB	BB00	78	0.23	BB00
39	1l3l_G_DG1_DA2	BBB	BB00	86	0.17	BB00
40	1l3l_G_DA2_DT3	BBB	BB01	92	0.20	BB01
41	1l3l_G_DT3_DG4	BBB	BB00	71	0.24	BB00
42	1l3l_G_DG4_DT5	BBB	BB00	76	0.34	BB00
43	1l3l_G_DT5_DG6	BBB	BB00	85	0.24	BB00
44	1l3l_G_DG6_DC7	BBw	BB02	67	0.17	BB02
45	1l3l_G_DC7_DA8	B12	BB04	17	0.28	BB04
46	1l3l_G_DA8_DG9	BBB	BB00	83	0.20	BB00
47	1l3l_G_DG9_DA10	BBB	BB00	74	0.27	BB00
48	1l3l_G_DA10_DT11	BBB	BB01	78	0.24	BB01
49	1l3l_G_DT11_DC12	BBB	BB00	50	0.39	BB00
50	1l3l_G_DC12_DT13	BBB	BB00	89	0.15	BB00
51	1l3l_G_DT13_DG14	BBB	BB00	96	0.18	BB00
52	1l3l_G_DG14_DC15	BBB	BB00	61	0.25	BB00
53	1l3l_G_DC15_DA16	BBB	BB00	78	0.22	BB00
54	1l3l_G_DA16_DC17	BBB	BB00	85	0.19	BB00
55	1l3l_G_DC17_DA18	BBB	BB00	59	0.29	BB00
56	1l3l_G_DA18_DT19	BBw	BB02	77	0.24	BB02
57	1l3l_G_DT19_DC20	BBB	BB00	69	0.31	BB00
58	1l3l_H_DG101_DA102	BBB	BB00	85	0.16	BB00
59	1l3l_H_DA102_DT103	BBB	BB00	86	0.22	BB00
60	1l3l_H_DT103_DG104	BBB	BB00	79	0.21	BB00
61	1l3l_H_DG104_DT105	BBw	BB02	34	0.33	BB02
62	1l3l_H_DT105_DG106	BBB	BB00	52	0.41	BB00
63	1l3l_H_DG106_DC107	NAN	NANT	0	0.44	BB02
64	1l3l_H_DC107_DA108	BBB	BB00	65	0.41	BB00
65	1l3l_H_DA108_DG109	BBB	BB00	74	0.25	BB00
66	1l3l_H_DG109_DA110	BBB	BB00	64	0.33	BB00
67	1l3l_H_DA110_DT111	BBB	BB01	75	0.24	BB01
68	1l3l_H_DT111_DC112	BBB	BB00	46	0.40	BB00
69	1l3l_H_DC112_DT113	BBB	BB00	89	0.15	BB00
70	1l3l_H_DT113_DG114	BBB	BB00	97	0.15	BB00
71	1l3l_H_DG114_DC115	BBw	BB02	64	0.30	BB02
72	1l3l_H_DC115_DA116	BBB	BB00	85	0.21	BB00
73	1l3l_H_DA116_DC117	BBB	BB00	91	0.18	BB00
74	1l3l_H_DC117_DA118	BBB	BB00	57	0.34	BB00
75	1l3l_H_DA118_DT119	BBB	BB00	84	0.23	BB00
76	1l3l_H_DT119_DC120	BBB	BB00	90	0.16	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 76 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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