DNATCO v4.1: results

Crystal Structures of Two Intermediates in the Assembly of the Papillomavirus Replication Initiation Complex

Results of the assignment of 80 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1ksx_C_DA1_DT2	BBw	BB11	85	0.30	BB11
02	1ksx_C_DT2_DA3	miB	BB13	21	0.65	BB13
03	1ksx_C_DA3_DA4	BBB	BB00	58	0.35	BB00
04	1ksx_C_DA4_DT5	BBw	BB02	73	0.20	BB02
05	1ksx_C_DT5_DT6	miB	BB13	58	0.31	BB13
06	1ksx_C_DT6_DG7	miB	BB13	32	0.40	BB13
07	1ksx_C_DG7_DT8	BBw	BB16	37	0.55	BB16
08	1ksx_C_DT8_DT9	BBB	BB00	78	0.27	BB00
09	1ksx_C_DT9_DG10	B12	BB05	81	0.30	BB05
10	1ksx_C_DG10_DT11	BBw	BB16	69	0.54	BB16
11	1ksx_C_DT11_DT12	BBB	BB00	92	0.13	BB00
12	1ksx_C_DT12_DA13	NAN	NANT	0	0.43	BB08
13	1ksx_C_DA13_DA14	BBB	BB00	71	0.26	BB00
14	1ksx_C_DA14_DC15	BBw	BB03	40	0.36	BB03
15	1ksx_C_DC15_DA16	B12	BB04	60	0.30	BB04
16	1ksx_C_DA16_DA17	BBB	BB00	78	0.20	BB00
17	1ksx_C_DA17_DC18	B12	BB04	52	0.37	BB04
18	1ksx_C_DC18_DA19	B12	BB04	61	0.29	BB04
19	1ksx_C_DA19_DA20	BBw	BB02	68	0.33	BB02
20	1ksx_C_DA20_DT21	NAN	NANT	0	0.53	BB02
21	1ksx_G_DA1_DT2	BBw	BB11	85	0.30	BB11
22	1ksx_G_DT2_DA3	miB	BB13	21	0.65	BB13
23	1ksx_G_DA3_DA4	BBB	BB00	58	0.35	BB00
24	1ksx_G_DA4_DT5	BBw	BB02	72	0.20	BB02
25	1ksx_G_DT5_DT6	miB	BB13	58	0.31	BB13
26	1ksx_G_DT6_DG7	miB	BB13	32	0.40	BB13
27	1ksx_G_DG7_DT8	BBw	BB16	37	0.55	BB16
28	1ksx_G_DT8_DT9	BBB	BB00	78	0.27	BB00
29	1ksx_G_DT9_DG10	B12	BB05	80	0.30	BB05
30	1ksx_G_DG10_DT11	BBw	BB16	69	0.54	BB16
31	1ksx_G_DT11_DT12	BBB	BB00	92	0.13	BB00
32	1ksx_G_DT12_DA13	NAN	NANT	0	0.43	BB08
33	1ksx_G_DA13_DA14	BBB	BB00	71	0.26	BB00
34	1ksx_G_DA14_DC15	BBw	BB03	40	0.36	BB03
35	1ksx_G_DC15_DA16	B12	BB04	60	0.30	BB04
36	1ksx_G_DA16_DA17	BBB	BB00	78	0.20	BB00
37	1ksx_G_DA17_DC18	B12	BB04	51	0.37	BB04
38	1ksx_G_DC18_DA19	B12	BB04	61	0.29	BB04
39	1ksx_G_DA19_DA20	BBw	BB02	68	0.33	BB02
40	1ksx_G_DA20_DT21	NAN	NANT	0	0.53	BB02
41	1ksx_K_DA1_DT2	BBw	BB11	85	0.30	BB11
42	1ksx_K_DT2_DA3	miB	BB13	21	0.65	BB13
43	1ksx_K_DA3_DA4	BBB	BB00	58	0.35	BB00
44	1ksx_K_DA4_DT5	BBw	BB02	72	0.20	BB02
45	1ksx_K_DT5_DT6	miB	BB13	58	0.31	BB13
46	1ksx_K_DT6_DG7	miB	BB13	32	0.40	BB13
47	1ksx_K_DG7_DT8	BBw	BB16	37	0.55	BB16
48	1ksx_K_DT8_DT9	BBB	BB00	78	0.27	BB00
49	1ksx_K_DT9_DG10	B12	BB05	80	0.30	BB05
50	1ksx_K_DG10_DT11	BBw	BB16	69	0.54	BB16
51	1ksx_K_DT11_DT12	BBB	BB00	92	0.13	BB00
52	1ksx_K_DT12_DA13	NAN	NANT	0	0.43	BB08
53	1ksx_K_DA13_DA14	BBB	BB00	71	0.26	BB00
54	1ksx_K_DA14_DC15	BBw	BB03	40	0.36	BB03
55	1ksx_K_DC15_DA16	B12	BB04	60	0.30	BB04
56	1ksx_K_DA16_DA17	BBB	BB00	78	0.20	BB00
57	1ksx_K_DA17_DC18	B12	BB04	51	0.37	BB04
58	1ksx_K_DC18_DA19	B12	BB04	61	0.29	BB04
59	1ksx_K_DA19_DA20	BBw	BB02	68	0.33	BB02
60	1ksx_K_DA20_DT21	NAN	NANT	0	0.53	BB02
61	1ksx_O_DA1_DT2	BBw	BB11	85	0.31	BB11
62	1ksx_O_DT2_DA3	miB	BB13	21	0.65	BB13
63	1ksx_O_DA3_DA4	BBB	BB00	58	0.35	BB00
64	1ksx_O_DA4_DT5	BBw	BB02	72	0.20	BB02
65	1ksx_O_DT5_DT6	miB	BB13	58	0.31	BB13
66	1ksx_O_DT6_DG7	miB	BB13	32	0.40	BB13
67	1ksx_O_DG7_DT8	BBw	BB16	37	0.55	BB16
68	1ksx_O_DT8_DT9	BBB	BB00	78	0.27	BB00
69	1ksx_O_DT9_DG10	B12	BB05	81	0.30	BB05
70	1ksx_O_DG10_DT11	BBw	BB16	69	0.54	BB16
71	1ksx_O_DT11_DT12	BBB	BB00	92	0.13	BB00
72	1ksx_O_DT12_DA13	NAN	NANT	0	0.43	BB08
73	1ksx_O_DA13_DA14	BBB	BB00	71	0.26	BB00
74	1ksx_O_DA14_DC15	BBw	BB03	40	0.36	BB03
75	1ksx_O_DC15_DA16	B12	BB04	60	0.30	BB04
76	1ksx_O_DA16_DA17	BBB	BB00	78	0.20	BB00
77	1ksx_O_DA17_DC18	B12	BB04	51	0.37	BB04
78	1ksx_O_DC18_DA19	B12	BB04	61	0.29	BB04
79	1ksx_O_DA19_DA20	BBw	BB02	68	0.33	BB02
80	1ksx_O_DA20_DT21	NAN	NANT	0	0.53	BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 80 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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