DNATCO v4.1: results

STRUCTURE OF AGUU RNA TETRALOOP, NMR, 20 STRUCTURES

Results of the assignment of 260 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1k4b-m10_A_G1_G2	AAu	AA12	29	0.39	AA12
002	1k4b-m11_A_G1_G2	AAA	AA00	37	0.32	AA00
003	1k4b-m12_A_G1_G2	AAA	AA00	46	0.28	AA00
004	1k4b-m13_A_G1_G2	AAA	AA00	15	0.38	AA00
005	1k4b-m14_A_G1_G2	AAA	AA00	29	0.33	AA00
006	1k4b-m15_A_G1_G2	AAA	AA00	38	0.32	AA00
007	1k4b-m16_A_G1_G2	AAA	AA00	29	0.30	AA00
008	1k4b-m17_A_G1_G2	AAA	AA00	59	0.24	AA00
009	1k4b-m18_A_G1_G2	AAA	AA00	31	0.31	AA00
010	1k4b-m19_A_G1_G2	AAA	AA00	30	0.34	AA00
011	1k4b-m1_A_G1_G2	AAA	AA00	43	0.27	AA00
012	1k4b-m20_A_G1_G2	AAA	AA00	16	0.38	AA00
013	1k4b-m2_A_G1_G2	AAA	AA00	23	0.36	AA00
014	1k4b-m3_A_G1_G2	AAu	AA12	36	0.41	AA12
015	1k4b-m4_A_G1_G2	AAA	AA00	27	0.35	AA00
016	1k4b-m5_A_G1_G2	AAA	AA00	28	0.35	AA00
017	1k4b-m6_A_G1_G2	AAA	AA00	51	0.26	AA00
018	1k4b-m7_A_G1_G2	AAA	AA00	28	0.35	AA00
019	1k4b-m8_A_G1_G2	AAA	AA00	36	0.29	AA00
020	1k4b-m9_A_G1_G2	AAA	AA00	32	0.33	AA00
021	1k4b-m10_A_G2_U3	AAA	AA00	70	0.19	AA00
022	1k4b-m11_A_G2_U3	AAA	AA00	74	0.21	AA00
023	1k4b-m12_A_G2_U3	AAA	AA00	71	0.21	AA00
024	1k4b-m13_A_G2_U3	AAA	AA00	64	0.20	AA00
025	1k4b-m14_A_G2_U3	AAA	AA00	63	0.23	AA00
026	1k4b-m15_A_G2_U3	AAA	AA00	73	0.20	AA00
027	1k4b-m16_A_G2_U3	AAA	AA00	82	0.17	AA00
028	1k4b-m17_A_G2_U3	AAA	AA00	68	0.20	AA00
029	1k4b-m18_A_G2_U3	AAA	AA00	64	0.21	AA00
030	1k4b-m19_A_G2_U3	AAA	AA00	64	0.21	AA00
031	1k4b-m1_A_G2_U3	AAA	AA00	69	0.20	AA00
032	1k4b-m20_A_G2_U3	AAA	AA00	79	0.20	AA00
033	1k4b-m2_A_G2_U3	AAA	AA00	65	0.24	AA00
034	1k4b-m3_A_G2_U3	AAA	AA00	72	0.20	AA00
035	1k4b-m4_A_G2_U3	AAA	AA00	76	0.20	AA00
036	1k4b-m5_A_G2_U3	AAA	AA00	65	0.21	AA00
037	1k4b-m6_A_G2_U3	AAA	AA00	68	0.20	AA00
038	1k4b-m7_A_G2_U3	AAA	AA00	75	0.19	AA00
039	1k4b-m8_A_G2_U3	AAA	AA00	70	0.18	AA00
040	1k4b-m9_A_G2_U3	AAA	AA00	71	0.22	AA00
041	1k4b-m10_A_U3_U4	AAA	AA00	76	0.34	AA00
042	1k4b-m11_A_U3_U4	AAA	AA00	71	0.28	AA00
043	1k4b-m12_A_U3_U4	AAA	AA00	76	0.33	AA00
044	1k4b-m13_A_U3_U4	AAA	AA00	68	0.29	AA00
045	1k4b-m14_A_U3_U4	AAA	AA00	69	0.25	AA00
046	1k4b-m15_A_U3_U4	AAA	AA00	77	0.35	AA00
047	1k4b-m16_A_U3_U4	AAA	AA00	84	0.27	AA00
048	1k4b-m17_A_U3_U4	AAA	AA00	78	0.32	AA00
049	1k4b-m18_A_U3_U4	AAA	AA00	74	0.25	AA00
050	1k4b-m19_A_U3_U4	AAA	AA00	81	0.29	AA00
051	1k4b-m1_A_U3_U4	AAA	AA00	79	0.33	AA00
052	1k4b-m20_A_U3_U4	AAA	AA00	75	0.34	AA00
053	1k4b-m2_A_U3_U4	AAA	AA00	70	0.40	AA00
054	1k4b-m3_A_U3_U4	AAA	AA00	84	0.34	AA00
055	1k4b-m4_A_U3_U4	AAA	AA00	82	0.30	AA00
056	1k4b-m5_A_U3_U4	AAA	AA00	78	0.25	AA00
057	1k4b-m6_A_U3_U4	AAA	AA00	80	0.29	AA00
058	1k4b-m7_A_U3_U4	AAA	AA00	87	0.27	AA00
059	1k4b-m8_A_U3_U4	AAA	AA00	70	0.36	AA00
060	1k4b-m9_A_U3_U4	AAA	AA00	76	0.37	AA00
061	1k4b-m10_A_U4_C5	AAA	AA00	52	0.29	AA00
062	1k4b-m11_A_U4_C5	AAA	AA00	71	0.34	AA00
063	1k4b-m12_A_U4_C5	AAA	AA00	69	0.27	AA00
064	1k4b-m13_A_U4_C5	AAA	AA00	70	0.24	AA00
065	1k4b-m14_A_U4_C5	AAA	AA00	72	0.23	AA00
066	1k4b-m15_A_U4_C5	AAA	AA00	65	0.29	AA00
067	1k4b-m16_A_U4_C5	AAA	AA00	77	0.32	AA00
068	1k4b-m17_A_U4_C5	AAA	AA00	69	0.29	AA00
069	1k4b-m18_A_U4_C5	AAA	AA00	65	0.32	AA00
070	1k4b-m19_A_U4_C5	AAA	AA00	70	0.24	AA00
071	1k4b-m1_A_U4_C5	AAA	AA00	64	0.30	AA00
072	1k4b-m20_A_U4_C5	AAA	AA00	86	0.25	AA00
073	1k4b-m2_A_U4_C5	AAA	AA00	63	0.34	AA00
074	1k4b-m3_A_U4_C5	AAA	AA00	72	0.29	AA00
075	1k4b-m4_A_U4_C5	AAA	AA00	69	0.27	AA00
076	1k4b-m5_A_U4_C5	AAA	AA00	79	0.31	AA00
077	1k4b-m6_A_U4_C5	AAA	AA00	63	0.27	AA00
078	1k4b-m7_A_U4_C5	AAA	AA00	71	0.27	AA00
079	1k4b-m8_A_U4_C5	AAA	AA00	65	0.26	AA00
080	1k4b-m9_A_U4_C5	AAA	AA00	69	0.29	AA00
081	1k4b-m10_A_C5_A6	AAw	AA01	44	0.34	AA01
082	1k4b-m11_A_C5_A6	AAw	AA01	28	0.40	AA01
083	1k4b-m12_A_C5_A6	AAw	AA01	36	0.37	AA01
084	1k4b-m13_A_C5_A6	AAw	AA01	18	0.32	AA01
085	1k4b-m14_A_C5_A6	AAw	AA01	45	0.33	AA01
086	1k4b-m15_A_C5_A6	AAw	AA01	20	0.39	AA01
087	1k4b-m16_A_C5_A6	AAw	AA01	24	0.37	AA01
088	1k4b-m17_A_C5_A6	AAw	AA01	54	0.32	AA01
089	1k4b-m18_A_C5_A6	AAw	AA01	26	0.37	AA01
090	1k4b-m19_A_C5_A6	AAw	AA01	35	0.36	AA01
091	1k4b-m1_A_C5_A6	AAw	AA01	48	0.33	AA01
092	1k4b-m20_A_C5_A6	AAw	AA01	58	0.33	AA01
093	1k4b-m2_A_C5_A6	AAw	AA01	37	0.37	AA01
094	1k4b-m3_A_C5_A6	AAw	AA01	49	0.33	AA01
095	1k4b-m4_A_C5_A6	AAw	AA01	46	0.33	AA01
096	1k4b-m5_A_C5_A6	AAw	AA01	35	0.34	AA01
097	1k4b-m6_A_C5_A6	AAw	AA01	41	0.33	AA01
098	1k4b-m7_A_C5_A6	AAw	AA01	40	0.35	AA01
099	1k4b-m8_A_C5_A6	AAw	AA01	20	0.34	AA01
100	1k4b-m9_A_C5_A6	AAw	AA01	54	0.33	AA01
101	1k4b-m10_A_A6_G7	NAN	NANT	0	0.79	AB2S
102	1k4b-m11_A_A6_G7	NAN	NANT	0	0.65	AB2S
103	1k4b-m12_A_A6_G7	NAN	NANT	0	0.79	AB2S
104	1k4b-m13_A_A6_G7	NAN	NANT	0	0.69	AA05
105	1k4b-m14_A_A6_G7	NAN	NANT	0	0.90	AB2S
106	1k4b-m15_A_A6_G7	NAN	NANT	0	0.80	AB2S
107	1k4b-m16_A_A6_G7	NAN	NANT	0	0.67	AB2S
108	1k4b-m17_A_A6_G7	NAN	NANT	0	0.73	AB2S
109	1k4b-m18_A_A6_G7	NAN	NANT	0	0.75	AB2S
110	1k4b-m19_A_A6_G7	NAN	NANT	0	0.88	AB2S
111	1k4b-m1_A_A6_G7	NAN	NANT	0	0.75	AB2S
112	1k4b-m20_A_A6_G7	NAN	NANT	0	0.77	AB2S
113	1k4b-m2_A_A6_G7	NAN	NANT	0	0.78	AB2S
114	1k4b-m3_A_A6_G7	NAN	NANT	0	0.85	AB2S
115	1k4b-m4_A_A6_G7	NAN	NANT	0	0.93	AB2S
116	1k4b-m5_A_A6_G7	NAN	NANT	0	0.71	AB2S
117	1k4b-m6_A_A6_G7	SYN	AB2S	10	0.74	AB2S
118	1k4b-m7_A_A6_G7	NAN	NANT	0	0.77	AA05
119	1k4b-m8_A_A6_G7	NAN	NANT	0	0.78	AB2S
120	1k4b-m9_A_A6_G7	NAN	NANT	0	0.74	AB2S
121	1k4b-m10_A_G7_U8	NAN	NANT	0	1.41	OP18
122	1k4b-m11_A_G7_U8	NAN	NANT	0	1.21	OPS1
123	1k4b-m12_A_G7_U8	NAN	NANT	0	1.29	BB08
124	1k4b-m13_A_G7_U8	NAN	NANT	0	0.83	IC03
125	1k4b-m14_A_G7_U8	NAN	NANT	0	1.06	BB08
126	1k4b-m15_A_G7_U8	NAN	NANT	0	2.05	ZZS1
127	1k4b-m16_A_G7_U8	NAN	NANT	0	1.98	ZZS1
128	1k4b-m17_A_G7_U8	NAN	NANT	0	0.67	OP27
129	1k4b-m18_A_G7_U8	NAN	NANT	0	1.00	IC03
130	1k4b-m19_A_G7_U8	NAN	NANT	0	1.48	AA11
131	1k4b-m1_A_G7_U8	NAN	NANT	0	0.68	OP27
132	1k4b-m20_A_G7_U8	NAN	NANT	0	1.99	ZZS1
133	1k4b-m2_A_G7_U8	NAN	NANT	0	0.71	OP27
134	1k4b-m3_A_G7_U8	NAN	NANT	0	2.02	ZZS1
135	1k4b-m4_A_G7_U8	NAN	NANT	0	0.99	OPS1
136	1k4b-m5_A_G7_U8	NAN	NANT	0	1.36	OPS1
137	1k4b-m6_A_G7_U8	NAN	NANT	0	2.06	ZZS1
138	1k4b-m7_A_G7_U8	NAN	NANT	0	0.78	IC03
139	1k4b-m8_A_G7_U8	NAN	NANT	0	1.02	OP25
140	1k4b-m9_A_G7_U8	NAN	NANT	0	1.01	OP25
141	1k4b-m10_A_U8_U9	NAN	NANT	0	0.89	OP04
142	1k4b-m11_A_U8_U9	NAN	NANT	0	0.74	OP27
143	1k4b-m12_A_U8_U9	NAN	NANT	0	0.72	OP20
144	1k4b-m13_A_U8_U9	NAN	NANT	0	2.31	IC04
145	1k4b-m14_A_U8_U9	NAN	NANT	0	2.45	IC02
146	1k4b-m15_A_U8_U9	NAN	NANT	0	1.00	OP04
147	1k4b-m16_A_U8_U9	NAN	NANT	0	0.98	IC06
148	1k4b-m17_A_U8_U9	NAN	NANT	0	1.51	BB11
149	1k4b-m18_A_U8_U9	NAN	NANT	0	0.90	OP27
150	1k4b-m19_A_U8_U9	NAN	NANT	0	1.98	OP17
151	1k4b-m1_A_U8_U9	NAN	NANT	0	1.38	AA12
152	1k4b-m20_A_U8_U9	NAN	NANT	0	1.40	BB08
153	1k4b-m2_A_U8_U9	NAN	NANT	0	0.96	OP04
154	1k4b-m3_A_U8_U9	NAN	NANT	0	0.87	OP04
155	1k4b-m4_A_U8_U9	NAN	NANT	0	1.55	OP27
156	1k4b-m5_A_U8_U9	NAN	NANT	0	1.89	OP23
157	1k4b-m6_A_U8_U9	NAN	NANT	0	1.23	OP12
158	1k4b-m7_A_U8_U9	NAN	NANT	0	1.05	OP21
159	1k4b-m8_A_U8_U9	NAN	NANT	0	1.29	BB08
160	1k4b-m9_A_U8_U9	NAN	NANT	0	0.91	OP04
161	1k4b-m10_A_U9_G10	NAN	NANT	0	1.10	OP12
162	1k4b-m11_A_U9_G10	NAN	NANT	0	0.65	OP22
163	1k4b-m12_A_U9_G10	NAN	NANT	0	0.92	OP12
164	1k4b-m13_A_U9_G10	NAN	NANT	0	0.88	OP12
165	1k4b-m14_A_U9_G10	NAN	NANT	0	0.85	OP12
166	1k4b-m15_A_U9_G10	NAN	NANT	0	1.06	OP12
167	1k4b-m16_A_U9_G10	NAN	NANT	0	0.62	OP22
168	1k4b-m17_A_U9_G10	NAN	NANT	0	0.99	OP12
169	1k4b-m18_A_U9_G10	NAN	NANT	0	0.69	OP22
170	1k4b-m19_A_U9_G10	NAN	NANT	0	0.92	OP12
171	1k4b-m1_A_U9_G10	NAN	NANT	0	0.99	OP12
172	1k4b-m20_A_U9_G10	NAN	NANT	0	1.03	OP12
173	1k4b-m2_A_U9_G10	NAN	NANT	0	0.96	OP12
174	1k4b-m3_A_U9_G10	NAN	NANT	0	0.97	OP12
175	1k4b-m4_A_U9_G10	NAN	NANT	0	0.89	OP12
176	1k4b-m5_A_U9_G10	NAN	NANT	0	0.69	OP26
177	1k4b-m6_A_U9_G10	NAN	NANT	0	0.66	OP26
178	1k4b-m7_A_U9_G10	NAN	NANT	0	0.91	OP12
179	1k4b-m8_A_U9_G10	NAN	NANT	0	0.98	OP12
180	1k4b-m9_A_U9_G10	NAN	NANT	0	1.03	OP12
181	1k4b-m10_A_G10_A11	NAN	NANT	0	0.49	AB04
182	1k4b-m11_A_G10_A11	AAA	AA00	69	0.29	AA00
183	1k4b-m12_A_G10_A11	AAA	AA08	25	0.31	AA08
184	1k4b-m13_A_G10_A11	AAA	AA00	61	0.27	AA00
185	1k4b-m14_A_G10_A11	AAA	AA00	61	0.20	AA00
186	1k4b-m15_A_G10_A11	AAA	AA00	18	0.33	AA00
187	1k4b-m16_A_G10_A11	AAA	AA00	74	0.22	AA00
188	1k4b-m17_A_G10_A11	AAA	AA08	15	0.35	AA08
189	1k4b-m18_A_G10_A11	AAA	AA00	60	0.33	AA00
190	1k4b-m19_A_G10_A11	AAA	AA00	48	0.24	AA00
191	1k4b-m1_A_G10_A11	AAA	AA00	32	0.26	AA00
192	1k4b-m20_A_G10_A11	AAA	AA00	30	0.29	AA00
193	1k4b-m2_A_G10_A11	AAA	AA00	24	0.30	AA00
194	1k4b-m3_A_G10_A11	AAA	AA00	25	0.32	AA00
195	1k4b-m4_A_G10_A11	AAA	AA00	46	0.32	AA00
196	1k4b-m5_A_G10_A11	AAA	AA00	66	0.29	AA00
197	1k4b-m6_A_G10_A11	AAA	AA00	73	0.26	AA00
198	1k4b-m7_A_G10_A11	AAA	AA00	45	0.26	AA00
199	1k4b-m8_A_G10_A11	AAA	AA00	41	0.27	AA00
200	1k4b-m9_A_G10_A11	AAA	AA08	13	0.37	AA08
201	1k4b-m10_A_A11_A12	AAA	AA00	59	0.26	AA00
202	1k4b-m11_A_A11_A12	AAA	AA00	24	0.41	AA00
203	1k4b-m12_A_A11_A12	AAA	AA00	33	0.32	AA00
204	1k4b-m13_A_A11_A12	AAA	AA00	53	0.27	AA00
205	1k4b-m14_A_A11_A12	AAA	AA00	57	0.25	AA00
206	1k4b-m15_A_A11_A12	AAA	AA00	58	0.23	AA00
207	1k4b-m16_A_A11_A12	AAA	AA00	34	0.36	AA00
208	1k4b-m17_A_A11_A12	AAA	AA00	60	0.22	AA00
209	1k4b-m18_A_A11_A12	AAA	AA00	35	0.39	AA00
210	1k4b-m19_A_A11_A12	AAA	AA00	62	0.23	AA00
211	1k4b-m1_A_A11_A12	AAA	AA00	61	0.24	AA00
212	1k4b-m20_A_A11_A12	AAA	AA00	62	0.24	AA00
213	1k4b-m2_A_A11_A12	AAA	AA00	68	0.18	AA00
214	1k4b-m3_A_A11_A12	AAA	AA00	38	0.31	AA00
215	1k4b-m4_A_A11_A12	AAA	AA00	19	0.39	AA00
216	1k4b-m5_A_A11_A12	AAA	AA00	22	0.42	AA00
217	1k4b-m6_A_A11_A12	AAA	AA00	38	0.35	AA00
218	1k4b-m7_A_A11_A12	AAA	AA00	30	0.34	AA00
219	1k4b-m8_A_A11_A12	AAA	AA00	57	0.24	AA00
220	1k4b-m9_A_A11_A12	AAA	AA00	39	0.33	AA00
221	1k4b-m10_A_A12_C13	AAA	AA00	78	0.27	AA00
222	1k4b-m11_A_A12_C13	AAA	AA00	66	0.27	AA00
223	1k4b-m12_A_A12_C13	AAA	AA00	61	0.22	AA00
224	1k4b-m13_A_A12_C13	AAA	AA00	74	0.25	AA00
225	1k4b-m14_A_A12_C13	AAA	AA00	55	0.27	AA00
226	1k4b-m15_A_A12_C13	AAA	AA00	64	0.21	AA00
227	1k4b-m16_A_A12_C13	AAA	AA00	64	0.23	AA00
228	1k4b-m17_A_A12_C13	AAA	AA00	78	0.22	AA00
229	1k4b-m18_A_A12_C13	AAA	AA00	61	0.33	AA00
230	1k4b-m19_A_A12_C13	AAA	AA00	66	0.24	AA00
231	1k4b-m1_A_A12_C13	AAA	AA00	74	0.19	AA00
232	1k4b-m20_A_A12_C13	AAA	AA00	68	0.21	AA00
233	1k4b-m2_A_A12_C13	AAA	AA00	74	0.21	AA00
234	1k4b-m3_A_A12_C13	AAA	AA00	75	0.21	AA00
235	1k4b-m4_A_A12_C13	AAA	AA00	75	0.20	AA00
236	1k4b-m5_A_A12_C13	AAA	AA00	61	0.23	AA00
237	1k4b-m6_A_A12_C13	AAA	AA00	68	0.21	AA00
238	1k4b-m7_A_A12_C13	AAA	AA00	73	0.20	AA00
239	1k4b-m8_A_A12_C13	AAA	AA00	75	0.23	AA00
240	1k4b-m9_A_A12_C13	AAA	AA00	68	0.24	AA00
241	1k4b-m10_A_C13_C14	AAA	AA00	62	0.23	AA00
242	1k4b-m11_A_C13_C14	AAA	AA00	68	0.28	AA00
243	1k4b-m12_A_C13_C14	AAA	AA00	67	0.23	AA00
244	1k4b-m13_A_C13_C14	AAA	AA00	54	0.27	AA00
245	1k4b-m14_A_C13_C14	AAA	AA00	63	0.25	AA00
246	1k4b-m15_A_C13_C14	AAA	AA00	71	0.21	AA00
247	1k4b-m16_A_C13_C14	AAA	AA00	54	0.24	AA00
248	1k4b-m17_A_C13_C14	AAA	AA00	67	0.24	AA00
249	1k4b-m18_A_C13_C14	AAA	AA00	68	0.27	AA00
250	1k4b-m19_A_C13_C14	AAA	AA00	62	0.26	AA00
251	1k4b-m1_A_C13_C14	AAA	AA00	56	0.23	AA00
252	1k4b-m20_A_C13_C14	AAA	AA00	74	0.24	AA00
253	1k4b-m2_A_C13_C14	AAA	AA00	71	0.22	AA00
254	1k4b-m3_A_C13_C14	AAA	AA00	71	0.25	AA00
255	1k4b-m4_A_C13_C14	AAA	AA00	66	0.22	AA00
256	1k4b-m5_A_C13_C14	AAA	AA00	64	0.28	AA00
257	1k4b-m6_A_C13_C14	AAA	AA00	70	0.19	AA00
258	1k4b-m7_A_C13_C14	AAA	AA00	57	0.28	AA00
259	1k4b-m8_A_C13_C14	AAA	AA00	72	0.20	AA00
260	1k4b-m9_A_C13_C14	AAA	AA00	66	0.25	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 260 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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