DNATCO v4.1: results

STRUCTURE OF AGAA RNA TETRALOOP, NMR, 20 STRUCTURES

Results of the assignment of 260 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1k4a-m10_A_G1_G2	AAu	AA12	31	0.48	AA12
002	1k4a-m11_A_G1_G2	AAA	AA00	25	0.36	AA00
003	1k4a-m12_A_G1_G2	AAA	AA00	21	0.36	AA00
004	1k4a-m13_A_G1_G2	AAu	AA12	30	0.50	AA12
005	1k4a-m14_A_G1_G2	AAA	AA00	17	0.37	AA00
006	1k4a-m15_A_G1_G2	AAA	AA00	23	0.34	AA00
007	1k4a-m16_A_G1_G2	AAA	AA00	22	0.37	AA00
008	1k4a-m17_A_G1_G2	AAu	AA12	34	0.47	AA12
009	1k4a-m18_A_G1_G2	AAu	AA12	30	0.42	AA12
010	1k4a-m19_A_G1_G2	AAA	AA00	25	0.35	AA00
011	1k4a-m1_A_G1_G2	AAA	AA08	8	0.45	AA08
012	1k4a-m20_A_G1_G2	AAA	AA00	30	0.32	AA00
013	1k4a-m2_A_G1_G2	AAA	AA00	27	0.34	AA00
014	1k4a-m3_A_G1_G2	AAA	AA00	27	0.31	AA00
015	1k4a-m4_A_G1_G2	AAu	AA12	19	0.49	AA12
016	1k4a-m5_A_G1_G2	AAu	AA12	24	0.50	AA12
017	1k4a-m6_A_G1_G2	AAu	AA12	17	0.47	AA12
018	1k4a-m7_A_G1_G2	AAA	AA00	8	0.46	AA00
019	1k4a-m8_A_G1_G2	AAu	AA12	32	0.50	AA12
020	1k4a-m9_A_G1_G2	AAA	AA00	62	0.23	AA00
021	1k4a-m10_A_G2_U3	AAA	AA00	36	0.31	AA00
022	1k4a-m11_A_G2_U3	AAA	AA00	34	0.27	AA00
023	1k4a-m12_A_G2_U3	AAA	AA00	26	0.28	AA00
024	1k4a-m13_A_G2_U3	AAA	AA00	30	0.27	AA00
025	1k4a-m14_A_G2_U3	AAA	AA00	27	0.25	AA00
026	1k4a-m15_A_G2_U3	AAA	AA08	46	0.24	AA08
027	1k4a-m16_A_G2_U3	AAA	AA00	32	0.29	AA00
028	1k4a-m17_A_G2_U3	AAA	AA00	32	0.33	AA00
029	1k4a-m18_A_G2_U3	AAA	AA08	39	0.28	AA08
030	1k4a-m19_A_G2_U3	AAA	AA00	69	0.21	AA00
031	1k4a-m1_A_G2_U3	AAA	AA00	53	0.27	AA00
032	1k4a-m20_A_G2_U3	AAA	AA00	27	0.27	AA00
033	1k4a-m2_A_G2_U3	AAA	AA00	59	0.24	AA00
034	1k4a-m3_A_G2_U3	AAA	AA00	32	0.25	AA00
035	1k4a-m4_A_G2_U3	AAA	AA00	24	0.32	AA00
036	1k4a-m5_A_G2_U3	AAA	AA00	35	0.26	AA00
037	1k4a-m6_A_G2_U3	AAA	AA00	28	0.34	AA00
038	1k4a-m7_A_G2_U3	AAA	AA00	36	0.25	AA00
039	1k4a-m8_A_G2_U3	AAA	AA00	31	0.36	AA00
040	1k4a-m9_A_G2_U3	AAA	AA04	80	0.26	AA04
041	1k4a-m10_A_U3_U4	AAA	AA00	30	0.29	AA00
042	1k4a-m11_A_U3_U4	AAA	AA00	81	0.27	AA00
043	1k4a-m12_A_U3_U4	AAA	AA00	76	0.28	AA00
044	1k4a-m13_A_U3_U4	AAA	AA04	71	0.32	AA04
045	1k4a-m14_A_U3_U4	AAA	AA00	61	0.33	AA00
046	1k4a-m15_A_U3_U4	AAA	AA00	36	0.30	AA00
047	1k4a-m16_A_U3_U4	AAA	AA00	28	0.31	AA00
048	1k4a-m17_A_U3_U4	AAA	AA00	30	0.32	AA00
049	1k4a-m18_A_U3_U4	AAA	AA00	67	0.32	AA00
050	1k4a-m19_A_U3_U4	AAA	AA00	48	0.29	AA00
051	1k4a-m1_A_U3_U4	AAA	AA00	67	0.30	AA00
052	1k4a-m20_A_U3_U4	AAA	AA00	48	0.31	AA00
053	1k4a-m2_A_U3_U4	AAA	AA00	74	0.30	AA00
054	1k4a-m3_A_U3_U4	AAA	AA00	43	0.31	AA00
055	1k4a-m4_A_U3_U4	AAA	AA00	28	0.31	AA00
056	1k4a-m5_A_U3_U4	AAA	AA04	73	0.29	AA04
057	1k4a-m6_A_U3_U4	AAA	AA00	57	0.21	AA00
058	1k4a-m7_A_U3_U4	AAA	AA04	76	0.32	AA04
059	1k4a-m8_A_U3_U4	AAA	AA00	67	0.25	AA00
060	1k4a-m9_A_U3_U4	AAA	AA04	87	0.25	AA04
061	1k4a-m10_A_U4_C5	AAA	AA00	30	0.35	AA00
062	1k4a-m11_A_U4_C5	AAA	AA00	44	0.28	AA00
063	1k4a-m12_A_U4_C5	AAA	AA04	82	0.26	AA04
064	1k4a-m13_A_U4_C5	AAA	AA04	73	0.32	AA04
065	1k4a-m14_A_U4_C5	AAA	AA04	79	0.33	AA04
066	1k4a-m15_A_U4_C5	AAA	AA00	78	0.24	AA00
067	1k4a-m16_A_U4_C5	AAA	AA00	28	0.30	AA00
068	1k4a-m17_A_U4_C5	AAA	AA04	79	0.30	AA04
069	1k4a-m18_A_U4_C5	AAA	AA04	79	0.27	AA04
070	1k4a-m19_A_U4_C5	AAA	AA00	43	0.33	AA00
071	1k4a-m1_A_U4_C5	AAA	AA00	32	0.36	AA00
072	1k4a-m20_A_U4_C5	AAA	AA00	35	0.28	AA00
073	1k4a-m2_A_U4_C5	AAA	AA04	81	0.31	AA04
074	1k4a-m3_A_U4_C5	AAA	AA00	31	0.28	AA00
075	1k4a-m4_A_U4_C5	AAA	AA00	29	0.30	AA00
076	1k4a-m5_A_U4_C5	AAA	AA00	67	0.30	AA00
077	1k4a-m6_A_U4_C5	AAA	AA00	80	0.28	AA00
078	1k4a-m7_A_U4_C5	AAA	AA00	30	0.31	AA00
079	1k4a-m8_A_U4_C5	AAA	AA00	55	0.29	AA00
080	1k4a-m9_A_U4_C5	AAA	AA04	76	0.29	AA04
081	1k4a-m10_A_C5_A6	AAw	AA01	23	0.37	AA01
082	1k4a-m11_A_C5_A6	NAN	NANT	0	0.56	AA10
083	1k4a-m12_A_C5_A6	AAw	AA01	52	0.39	AA01
084	1k4a-m13_A_C5_A6	AAw	AA10	12	0.54	AA10
085	1k4a-m14_A_C5_A6	AAw	AA01	35	0.42	AA01
086	1k4a-m15_A_C5_A6	AAw	AA10	17	0.60	AA10
087	1k4a-m16_A_C5_A6	AAw	AA01	50	0.45	AA01
088	1k4a-m17_A_C5_A6	AAA	AA04	22	0.53	AA04
089	1k4a-m18_A_C5_A6	AAw	AA10	14	0.55	AA10
090	1k4a-m19_A_C5_A6	AAw	AA10	29	0.51	AA10
091	1k4a-m1_A_C5_A6	AAw	AA01	29	0.39	AA01
092	1k4a-m20_A_C5_A6	AAw	AA10	19	0.50	AA10
093	1k4a-m2_A_C5_A6	AAw	AA01	31	0.34	AA01
094	1k4a-m3_A_C5_A6	NAN	NANT	0	0.47	AA01
095	1k4a-m4_A_C5_A6	AAw	AA01	40	0.56	AA01
096	1k4a-m5_A_C5_A6	AAw	AA10	29	0.50	AA10
097	1k4a-m6_A_C5_A6	AAw	AA10	26	0.46	AA10
098	1k4a-m7_A_C5_A6	AAw	AA01	57	0.34	AA01
099	1k4a-m8_A_C5_A6	AAw	AA10	27	0.48	AA10
100	1k4a-m9_A_C5_A6	AAw	AA10	18	0.49	AA10
101	1k4a-m10_A_A6_G7	SYN	AB2S	20	0.47	AB2S
102	1k4a-m11_A_A6_G7	NAN	NANT	0	0.59	AB2S
103	1k4a-m12_A_A6_G7	SYN	AB2S	30	0.26	AB2S
104	1k4a-m13_A_A6_G7	SYN	AB2S	48	0.41	AB2S
105	1k4a-m14_A_A6_G7	NAN	NANT	0	0.55	AB2S
106	1k4a-m15_A_A6_G7	SYN	AB2S	32	0.46	AB2S
107	1k4a-m16_A_A6_G7	NAN	NANT	0	0.37	AB2S
108	1k4a-m17_A_A6_G7	SYN	AB2S	31	0.50	AB2S
109	1k4a-m18_A_A6_G7	NAN	NANT	0	0.53	AB2S
110	1k4a-m19_A_A6_G7	NAN	NANT	0	0.36	AB2S
111	1k4a-m1_A_A6_G7	NAN	NANT	0	0.44	AB2S
112	1k4a-m20_A_A6_G7	SYN	AB2S	29	0.58	AB2S
113	1k4a-m2_A_A6_G7	SYN	AB2S	35	0.41	AB2S
114	1k4a-m3_A_A6_G7	NAN	NANT	0	0.45	AB2S
115	1k4a-m4_A_A6_G7	NAN	NANT	0	0.31	AB2S
116	1k4a-m5_A_A6_G7	SYN	AB2S	51	0.49	AB2S
117	1k4a-m6_A_A6_G7	NAN	NANT	0	0.37	AB2S
118	1k4a-m7_A_A6_G7	NAN	NANT	0	0.36	AB2S
119	1k4a-m8_A_A6_G7	SYN	AB2S	42	0.32	AB2S
120	1k4a-m9_A_A6_G7	SYN	AB2S	37	0.31	AB2S
121	1k4a-m10_A_G7_A8	NAN	NANT	0	1.06	OP25
122	1k4a-m11_A_G7_A8	NAN	NANT	0	1.28	OP18
123	1k4a-m12_A_G7_A8	NAN	NANT	0	0.98	OP25
124	1k4a-m13_A_G7_A8	NAN	NANT	0	1.10	OP25
125	1k4a-m14_A_G7_A8	NAN	NANT	0	1.22	OP25
126	1k4a-m15_A_G7_A8	NAN	NANT	0	1.17	OP18
127	1k4a-m16_A_G7_A8	NAN	NANT	0	0.93	OP18
128	1k4a-m17_A_G7_A8	NAN	NANT	0	1.25	OP18
129	1k4a-m18_A_G7_A8	NAN	NANT	0	1.24	OP18
130	1k4a-m19_A_G7_A8	NAN	NANT	0	1.07	OP18
131	1k4a-m1_A_G7_A8	NAN	NANT	0	1.18	OP25
132	1k4a-m20_A_G7_A8	NAN	NANT	0	1.28	OP18
133	1k4a-m2_A_G7_A8	NAN	NANT	0	2.41	OPS1
134	1k4a-m3_A_G7_A8	NAN	NANT	0	0.98	OP18
135	1k4a-m4_A_G7_A8	NAN	NANT	0	1.04	OP18
136	1k4a-m5_A_G7_A8	NAN	NANT	0	1.16	OP25
137	1k4a-m6_A_G7_A8	NAN	NANT	0	1.05	OP18
138	1k4a-m7_A_G7_A8	NAN	NANT	0	1.00	OP18
139	1k4a-m8_A_G7_A8	NAN	NANT	0	1.01	OP18
140	1k4a-m9_A_G7_A8	NAN	NANT	0	1.01	OP25
141	1k4a-m10_A_A8_A9	NAN	NANT	0	0.86	BA13
142	1k4a-m11_A_A8_A9	BBw	BB11	25	0.76	BB11
143	1k4a-m12_A_A8_A9	NAN	NANT	0	0.87	BB12
144	1k4a-m13_A_A8_A9	NAN	NANT	0	0.88	BB12
145	1k4a-m14_A_A8_A9	NAN	NANT	0	0.76	BB11
146	1k4a-m15_A_A8_A9	NAN	NANT	0	0.84	BB13
147	1k4a-m16_A_A8_A9	NAN	NANT	0	0.80	BB12
148	1k4a-m17_A_A8_A9	NAN	NANT	0	0.80	BA10
149	1k4a-m18_A_A8_A9	NAN	NANT	0	0.84	BA10
150	1k4a-m19_A_A8_A9	NAN	NANT	0	0.87	BA13
151	1k4a-m1_A_A8_A9	NAN	NANT	0	0.92	BB12
152	1k4a-m20_A_A8_A9	NAN	NANT	0	0.81	BA10
153	1k4a-m2_A_A8_A9	NAN	NANT	0	0.91	BA01
154	1k4a-m3_A_A8_A9	NAN	NANT	0	1.03	BA08
155	1k4a-m4_A_A8_A9	NAN	NANT	0	0.77	BB12
156	1k4a-m5_A_A8_A9	NAN	NANT	0	0.75	BA10
157	1k4a-m6_A_A8_A9	NAN	NANT	0	0.88	BA13
158	1k4a-m7_A_A8_A9	NAN	NANT	0	0.92	BA13
159	1k4a-m8_A_A8_A9	NAN	NANT	0	0.80	BB12
160	1k4a-m9_A_A8_A9	NAN	NANT	0	0.87	BA08
161	1k4a-m10_A_A9_G10	NAN	NANT	0	0.61	AA04
162	1k4a-m11_A_A9_G10	NAN	NANT	0	0.66	AA04
163	1k4a-m12_A_A9_G10	NAN	NANT	0	0.64	AA04
164	1k4a-m13_A_A9_G10	NAN	NANT	0	0.67	AA04
165	1k4a-m14_A_A9_G10	NAN	NANT	0	0.58	AA04
166	1k4a-m15_A_A9_G10	NAN	NANT	0	0.69	AA04
167	1k4a-m16_A_A9_G10	NAN	NANT	0	0.58	AA04
168	1k4a-m17_A_A9_G10	NAN	NANT	0	0.57	AA04
169	1k4a-m18_A_A9_G10	NAN	NANT	0	0.58	AA04
170	1k4a-m19_A_A9_G10	NAN	NANT	0	0.59	AA04
171	1k4a-m1_A_A9_G10	NAN	NANT	0	0.69	AA04
172	1k4a-m20_A_A9_G10	NAN	NANT	0	0.60	AA04
173	1k4a-m2_A_A9_G10	NAN	NANT	0	0.59	AA04
174	1k4a-m3_A_A9_G10	NAN	NANT	0	0.43	AA04
175	1k4a-m4_A_A9_G10	NAN	NANT	0	0.57	AA04
176	1k4a-m5_A_A9_G10	NAN	NANT	0	0.57	AA04
177	1k4a-m6_A_A9_G10	NAN	NANT	0	0.58	AA04
178	1k4a-m7_A_A9_G10	NAN	NANT	0	0.63	AA04
179	1k4a-m8_A_A9_G10	NAN	NANT	0	0.65	AA04
180	1k4a-m9_A_A9_G10	NAN	NANT	0	0.63	AA04
181	1k4a-m10_A_G10_A11	AAA	AA04	81	0.18	AA04
182	1k4a-m11_A_G10_A11	AAA	AA00	36	0.26	AA00
183	1k4a-m12_A_G10_A11	AAA	AA00	40	0.23	AA00
184	1k4a-m13_A_G10_A11	AAA	AA00	36	0.20	AA00
185	1k4a-m14_A_G10_A11	AAA	AA04	82	0.21	AA04
186	1k4a-m15_A_G10_A11	AAA	AA04	81	0.20	AA04
187	1k4a-m16_A_G10_A11	AAA	AA04	75	0.24	AA04
188	1k4a-m17_A_G10_A11	AAA	AA00	28	0.21	AA00
189	1k4a-m18_A_G10_A11	AAA	AA00	39	0.21	AA00
190	1k4a-m19_A_G10_A11	AAA	AA00	62	0.21	AA00
191	1k4a-m1_A_G10_A11	AAA	AA04	87	0.23	AA04
192	1k4a-m20_A_G10_A11	AAA	AA00	29	0.24	AA00
193	1k4a-m2_A_G10_A11	AAA	AA00	37	0.21	AA00
194	1k4a-m3_A_G10_A11	AAA	AA00	42	0.17	AA00
195	1k4a-m4_A_G10_A11	AAA	AA04	77	0.21	AA04
196	1k4a-m5_A_G10_A11	AAA	AA04	85	0.18	AA04
197	1k4a-m6_A_G10_A11	AAA	AA00	64	0.32	AA00
198	1k4a-m7_A_G10_A11	AAA	AA00	31	0.20	AA00
199	1k4a-m8_A_G10_A11	AAA	AA00	34	0.22	AA00
200	1k4a-m9_A_G10_A11	AAA	AA00	41	0.27	AA00
201	1k4a-m10_A_A11_A12	AAA	AA00	28	0.36	AA00
202	1k4a-m11_A_A11_A12	AAA	AA00	24	0.34	AA00
203	1k4a-m12_A_A11_A12	AAA	AA04	69	0.30	AA04
204	1k4a-m13_A_A11_A12	AAA	AA00	23	0.35	AA00
205	1k4a-m14_A_A11_A12	AAA	AA00	27	0.32	AA00
206	1k4a-m15_A_A11_A12	AAA	AA00	27	0.29	AA00
207	1k4a-m16_A_A11_A12	AAA	AA00	31	0.28	AA00
208	1k4a-m17_A_A11_A12	AAA	AA00	28	0.31	AA00
209	1k4a-m18_A_A11_A12	AAA	AA00	27	0.30	AA00
210	1k4a-m19_A_A11_A12	AAA	AA00	26	0.35	AA00
211	1k4a-m1_A_A11_A12	AAA	AA00	21	0.40	AA00
212	1k4a-m20_A_A11_A12	AAA	AA00	30	0.24	AA00
213	1k4a-m2_A_A11_A12	AAA	AA00	23	0.34	AA00
214	1k4a-m3_A_A11_A12	AAA	AA04	87	0.19	AA04
215	1k4a-m4_A_A11_A12	AAA	AA00	25	0.32	AA00
216	1k4a-m5_A_A11_A12	AAA	AA00	25	0.33	AA00
217	1k4a-m6_A_A11_A12	AAA	AA00	16	0.44	AA00
218	1k4a-m7_A_A11_A12	AAA	AA04	71	0.30	AA04
219	1k4a-m8_A_A11_A12	AAu	AA12	45	0.32	AA12
220	1k4a-m9_A_A11_A12	AAA	AA00	24	0.36	AA00
221	1k4a-m10_A_A12_C13	AAA	AA00	30	0.27	AA00
222	1k4a-m11_A_A12_C13	AAA	AA04	84	0.23	AA04
223	1k4a-m12_A_A12_C13	AAA	AA00	31	0.27	AA00
224	1k4a-m13_A_A12_C13	AAA	AA04	86	0.23	AA04
225	1k4a-m14_A_A12_C13	AAA	AA00	31	0.24	AA00
226	1k4a-m15_A_A12_C13	AAA	AA00	29	0.20	AA00
227	1k4a-m16_A_A12_C13	AAA	AA00	31	0.28	AA00
228	1k4a-m17_A_A12_C13	AAA	AA00	38	0.27	AA00
229	1k4a-m18_A_A12_C13	AAA	AA00	30	0.25	AA00
230	1k4a-m19_A_A12_C13	AAA	AA04	86	0.26	AA04
231	1k4a-m1_A_A12_C13	AAA	AA00	33	0.22	AA00
232	1k4a-m20_A_A12_C13	AAA	AA00	32	0.26	AA00
233	1k4a-m2_A_A12_C13	AAA	AA00	29	0.26	AA00
234	1k4a-m3_A_A12_C13	AAA	AA00	36	0.28	AA00
235	1k4a-m4_A_A12_C13	AAA	AA00	30	0.23	AA00
236	1k4a-m5_A_A12_C13	AAA	AA00	41	0.29	AA00
237	1k4a-m6_A_A12_C13	AAA	AA00	31	0.29	AA00
238	1k4a-m7_A_A12_C13	AAA	AA04	86	0.24	AA04
239	1k4a-m8_A_A12_C13	AAA	AA00	31	0.28	AA00
240	1k4a-m9_A_A12_C13	AAA	AA00	37	0.23	AA00
241	1k4a-m10_A_C13_C14	AAA	AA08	38	0.29	AA08
242	1k4a-m11_A_C13_C14	AAA	AA00	28	0.31	AA00
243	1k4a-m12_A_C13_C14	AAA	AA00	27	0.23	AA00
244	1k4a-m13_A_C13_C14	AAA	AA00	28	0.36	AA00
245	1k4a-m14_A_C13_C14	AAA	AA00	29	0.28	AA00
246	1k4a-m15_A_C13_C14	AAA	AA04	86	0.26	AA04
247	1k4a-m16_A_C13_C14	AAA	AA00	25	0.24	AA00
248	1k4a-m17_A_C13_C14	AAA	AA00	23	0.34	AA00
249	1k4a-m18_A_C13_C14	AAA	AA00	38	0.24	AA00
250	1k4a-m19_A_C13_C14	AAA	AA00	24	0.32	AA00
251	1k4a-m1_A_C13_C14	AAA	AA00	39	0.24	AA00
252	1k4a-m20_A_C13_C14	AAA	AA00	31	0.24	AA00
253	1k4a-m2_A_C13_C14	AAA	AA00	40	0.25	AA00
254	1k4a-m3_A_C13_C14	AAA	AA00	36	0.25	AA00
255	1k4a-m4_A_C13_C14	AAA	AA00	29	0.24	AA00
256	1k4a-m5_A_C13_C14	AAA	AA00	52	0.26	AA00
257	1k4a-m6_A_C13_C14	AAA	AA00	30	0.26	AA00
258	1k4a-m7_A_C13_C14	AAA	AA00	31	0.34	AA00
259	1k4a-m8_A_C13_C14	AAA	AA00	30	0.26	AA00
260	1k4a-m9_A_C13_C14	AAA	AA00	28	0.32	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 260 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible