Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Crystal Structure of the Jun/CRE Complex
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 38 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 1jnm_C_DC201_DG202 | BBB | BB00 | 81 | 0.23 |
| 02 | 1jnm_C_DG202_DT203 | BBB | BB00 | 72 | 0.26 |
| 03 | 1jnm_C_DT203_DC204 | BBB | BB00 | 69 | 0.29 |
| 04 | 1jnm_C_DC204_DG205 | BBB | BB00 | 83 | 0.39 |
| 05 | 1jnm_C_DG205_DA206 | BBB | BB00 | 82 | 0.21 |
| 06 | 1jnm_C_DA206_DT207 | BBw | BB02 | 84 | 0.14 |
| 07 | 1jnm_C_DT207_DG208 | B12 | BB04 | 42 | 0.20 |
| 08 | 1jnm_C_DG208_DA209 | BBB | BB00 | 90 | 0.13 |
| 09 | 1jnm_C_DA209_DC210 | BBB | BB00 | 73 | 0.22 |
| 10 | 1jnm_C_DC210_DG211 | BBB | BB00 | 73 | 0.30 |
| 11 | 1jnm_C_DG211_DT212 | BBB | BB00 | 67 | 0.21 |
| 12 | 1jnm_C_DT212_DC213 | BBB | BB00 | 68 | 0.21 |
| 13 | 1jnm_C_DC213_DA214 | BBB | BB00 | 81 | 0.17 |
| 14 | 1jnm_C_DA214_DT215 | BBB | BB00 | 80 | 0.22 |
| 15 | 1jnm_C_DT215_DC216 | BBB | BB00 | 38 | 0.32 |
| 16 | 1jnm_C_DC216_DG217 | BBB | BB00 | 68 | 0.38 |
| 17 | 1jnm_C_DG217_DA218 | BBB | BB00 | 94 | 0.11 |
| 18 | 1jnm_C_DA218_DC219 | BBB | BB00 | 88 | 0.18 |
| 19 | 1jnm_C_DC219_DG220 | BBB | BB00 | 59 | 0.30 |
| 20 | 1jnm_D_DC301_DG302 | BBw | BB03 | 75 | 0.38 |
| 21 | 1jnm_D_DG302_DT303 | BBB | BB01 | 71 | 0.27 |
| 22 | 1jnm_D_DT303_DC304 | BBB | BB00 | 46 | 0.29 |
| 23 | 1jnm_D_DC304_DG305 | BBB | BB00 | 64 | 0.42 |
| 24 | 1jnm_D_DG305_DA306 | BBB | BB00 | 89 | 0.18 |
| 25 | 1jnm_D_DA306_DT307 | BBB | BB00 | 78 | 0.19 |
| 26 | 1jnm_D_DT307_DG308 | B12 | BB04 | 81 | 0.17 |
| 27 | 1jnm_D_DG308_DA309 | BBB | BB00 | 96 | 0.08 |
| 28 | 1jnm_D_DA309_DC310 | BBw | BB02 | 70 | 0.24 |
| 29 | 1jnm_D_DC310_DG311 | BBB | BB00 | 83 | 0.32 |
| 30 | 1jnm_D_DG311_DT312 | BBB | BB01 | 79 | 0.14 |
| 31 | 1jnm_D_DT312_DC313 | BBB | BB00 | 69 | 0.19 |
| 32 | 1jnm_D_DC313_DA314 | BBB | BB00 | 92 | 0.13 |
| 33 | 1jnm_D_DA314_DT315 | BBB | BB00 | 62 | 0.23 |
| 34 | 1jnm_D_DT315_DC316 | BBw | BB02 | 47 | 0.35 |
| 35 | 1jnm_D_DC316_DG317 | BBB | BB00 | 77 | 0.42 |
| 36 | 1jnm_D_DG317_DA318 | BBB | BB00 | 89 | 0.12 |
| 37 | 1jnm_D_DA318_DC319 | BBB | BB00 | 89 | 0.17 |
| 38 | 1jnm_D_DC319_DG320 | BBB | BB00 | 63 | 0.29 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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