DNATCO v4.1: results

Crystal Structure Of Archaeosine tRNA-Guanine Transglycosylase Complexed With lambda-form tRNA(Val)

Results of the assignment of 145 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1j2b_C_G901_G902	AAA	AA00	15	0.38	AA00
002	1j2b_C_G902_G903	AAA	AA00	63	0.25	AA00
003	1j2b_C_G903_C904	AAA	AA00	87	0.13	AA00
004	1j2b_C_C904_C905	AAA	AA00	77	0.19	AA00
005	1j2b_C_C905_C906	AAA	AA00	62	0.22	AA00
006	1j2b_C_C906_G907	AAA	AA00	6	0.43	AA00
007	1j2b_C_G907_U908	NAN	NANT	0	1.41	AA13
008	1j2b_C_U908_G909	NAN	NANT	0	1.30	OP17
009	1j2b_C_G909_G910	AAw	AA06	58	0.46	AA06
010	1j2b_C_G910_U911	AAA	AA08	67	0.30	AA08
011	1j2b_C_U911_C912	AAA	AA08	81	0.27	AA08
012	1j2b_C_C912_U913	AAA	AA00	24	0.51	AA00
013	1j2b_C_U913_A914	NAN	NANT	0	2.52	IC04
014	1j2b_C_A914_G915	NAN	NANT	0	1.24	IC03
015	1j2b_C_G915_U916	NAN	NANT	0	1.81	OP31
016	1j2b_C_U916_U917	NAN	NANT	0	1.47	OP06
017	1j2b_C_U917_G918	NAN	NANT	0	1.62	OP06
018	1j2b_C_G918_G919	AAA	AA03	40	0.35	AA03
019	1j2b_C_G919_U920	AAA	AA08	70	0.34	AA08
020	1j2b_C_U920_C921	AAA	AA00	89	0.18	AA00
021	1j2b_C_C921_A922	AAw	AA06	85	0.27	AA06
022	1j2b_C_A922_U923	AAA	AA08	76	0.41	AA08
023	1j2b_C_U923_G924	NAN	NANT	0	1.06	OP17
024	1j2b_C_G924_A925	AAA	AA08	85	0.30	AA08
025	1j2b_C_A925_C926	AAA	AA00	76	0.21	AA00
026	1j2b_C_C926_G927	AAA	AA00	39	0.33	AA00
027	1j2b_C_G927_C928	AAA	AA09	60	0.37	AA09
028	1j2b_C_C928_C929	AAu	AA12	27	0.53	AA12
029	1j2b_C_C929_G930	AAA	AA00	50	0.30	AA00
030	1j2b_C_G930_C931	AAA	AA00	61	0.21	AA00
031	1j2b_C_C931_C932	AAA	AA00	75	0.23	AA00
032	1j2b_C_C932_C933	AAA	AA08	73	0.25	AA08
033	1j2b_C_C933_U934	AAw	AA01	65	0.26	AA01
034	1j2b_C_U934_U935	NAN	NANT	0	0.85	OP04
035	1j2b_C_U935_A936	NAN	NANT	0	0.72	AA11
036	1j2b_C_A936_C937	NAN	NANT	0	0.51	AA01
037	1j2b_C_C937_G938	NAN	NANT	0	1.11	AA11
038	1j2b_C_G938_A939	AAA	AA08	30	0.49	AA08
039	1j2b_C_A939_G940	AAw	AA01	58	0.27	AA01
040	1j2b_C_G940_G941	AAA	AA08	67	0.28	AA08
041	1j2b_C_G941_C942	AAA	AA00	68	0.17	AA00
042	1j2b_C_C942_G943	AAA	AA00	81	0.20	AA00
043	1j2b_C_G943_G944	AAA	AA00	69	0.34	AA00
044	1j2b_C_G944_A945	AAA	AA00	37	0.31	AA00
045	1j2b_C_A945_G946	AAA	AA08	45	0.43	AA08
046	1j2b_C_G946_G947	AAu	AA12	41	0.66	AA12
047	1j2b_C_G947_U948	AAA	AA00	69	0.29	AA00
048	1j2b_C_U948_C949	NAN	NANT	0	0.62	AB04
049	1j2b_C_C949_C950	NAN	NANT	0	1.39	OP06
050	1j2b_C_C950_G951	AAA	AA00	19	0.38	AA00
051	1j2b_C_G951_G952	AAA	AA00	88	0.10	AA00
052	1j2b_C_G952_G953	AAA	AA00	72	0.22	AA00
053	1j2b_C_G953_G954	AAw	AA01	54	0.34	AA01
054	1j2b_C_G954_U955	NAN	NANT	0	0.63	AA04
055	1j2b_C_U955_U956	AAA	AA00	77	0.22	AA00
056	1j2b_C_U956_C957	OPN	OP04	50	0.23	OP04
057	1j2b_C_C957_A958	NAN	NANT	0	0.81	AA02
058	1j2b_C_A958_A959	NAN	NANT	0	0.51	IC01
059	1j2b_C_A959_G960	NAN	NANT	0	1.43	OP18
060	1j2b_C_G960_U961	NAN	NANT	0	0.73	AAS1
061	1j2b_C_U961_C962	NAN	NANT	0	1.59	ZZ01
062	1j2b_C_C962_C963	AAw	AA11	49	0.31	AA11
063	1j2b_C_C963_C964	AAA	AA08	65	0.40	AA08
064	1j2b_C_C964_C965	AAA	AA00	76	0.23	AA00
065	1j2b_C_C965_G966	AAA	AA00	84	0.24	AA00
066	1j2b_C_G966_C967	AAA	AA00	74	0.18	AA00
067	1j2b_C_C967_G968	AAw	AA01	90	0.27	AA01
068	1j2b_C_G968_G969	AAA	AA08	32	0.29	AA08
069	1j2b_C_G969_G970	AAA	AA00	55	0.25	AA00
070	1j2b_C_G970_C971	AAA	AA00	16	0.22	AA00
071	1j2b_C_C971_C972	AAA	AA00	83	0.17	AA00
072	1j2b_C_C972_C973	AAA	AA00	81	0.19	AA00
073	1j2b_C_C973_A974	AAA	AA00	80	0.20	AA00
074	1j2b_C_A974_C975	NAN	NANT	0	0.34	AA03
075	1j2b_C_C975_C976	NAN	NANT	0	1.66	OP30
076	1j2b_C_C976_A977	NAN	NANT	0	2.10	IC04
077	1j2b_D_G901_G902	AAw	AA01	73	0.35	AA01
078	1j2b_D_G902_G903	AAA	AA08	59	0.32	AA08
079	1j2b_D_G903_C904	AAA	AA00	60	0.19	AA00
080	1j2b_D_C904_C905	AAA	AA00	17	0.35	AA00
081	1j2b_D_C905_C906	AAA	AA00	30	0.33	AA00
082	1j2b_D_C906_G907	AAA	AA00	45	0.35	AA00
083	1j2b_D_G907_U908	NAN	NANT	0	1.64	AA02
084	1j2b_D_U908_G909	NAN	NANT	0	1.28	OP17
085	1j2b_D_G909_G910	NAN	NANT	0	0.42	AA10
086	1j2b_D_G910_U911	AAA	AA08	56	0.31	AA08
087	1j2b_D_U911_C912	AAA	AA02	14	0.54	AA02
088	1j2b_D_C912_U913	AAA	AA02	20	0.54	AA02
089	1j2b_D_U913_A914	NAN	NANT	0	1.39	OP09
090	1j2b_D_A914_G915	NAN	NANT	0	1.86	OP10
091	1j2b_D_G915_U916	NAN	NANT	0	2.00	OP31
092	1j2b_D_U916_U917	NAN	NANT	0	0.52	OP17
093	1j2b_D_G924_A925	AAA	AA00	48	0.33	AA00
094	1j2b_D_A925_C926	AAA	AA00	67	0.29	AA00
095	1j2b_D_C926_G927	AAA	AA00	67	0.19	AA00
096	1j2b_D_G927_C928	AAA	AA00	74	0.18	AA00
097	1j2b_D_C928_C929	AAu	AA12	61	0.39	AA12
098	1j2b_D_C929_G930	AAA	AA00	90	0.19	AA00
099	1j2b_D_G930_C931	AAA	AA00	33	0.26	AA00
100	1j2b_D_C931_C932	AAA	AA00	34	0.27	AA00
101	1j2b_D_C932_C933	AAA	AA00	64	0.27	AA00
102	1j2b_D_C933_U934	AAw	AA01	37	0.34	AA01
103	1j2b_D_U934_U935	NAN	NANT	0	0.77	OP04
104	1j2b_D_U935_A936	NAN	NANT	0	0.82	AA11
105	1j2b_D_A936_C937	NAN	NANT	0	0.52	AA01
106	1j2b_D_C937_G938	NAN	NANT	0	0.83	AA05
107	1j2b_D_G938_A939	NAN	NANT	0	0.73	AA08
108	1j2b_D_A939_G940	AAw	AA06	45	0.34	AA06
109	1j2b_D_G940_G941	AAA	AA08	66	0.32	AA08
110	1j2b_D_G941_C942	AAA	AA00	69	0.20	AA00
111	1j2b_D_C942_G943	AAA	AA00	66	0.23	AA00
112	1j2b_D_G943_G944	AAA	AA00	75	0.28	AA00
113	1j2b_D_G944_A945	AAA	AA00	30	0.41	AA00
114	1j2b_D_A945_G946	AAA	AA08	24	0.53	AA08
115	1j2b_D_G946_G947	NAN	NANT	0	1.31	AA06
116	1j2b_D_G947_U948	AAA	AA08	54	0.48	AA08
117	1j2b_D_U948_C949	AAA	AA00	35	0.41	AA00
118	1j2b_D_C949_C950	NAN	NANT	0	1.23	OP06
119	1j2b_D_C950_G951	AAA	AA08	57	0.33	AA08
120	1j2b_D_G951_G952	AAA	AA00	84	0.18	AA00
121	1j2b_D_G952_G953	AAA	AA00	49	0.27	AA00
122	1j2b_D_G953_G954	AAw	AA06	85	0.27	AA06
123	1j2b_D_G954_U955	NAN	NANT	0	0.79	AA12
124	1j2b_D_U955_U956	AAA	AA00	18	0.44	AA00
125	1j2b_D_U956_C957	OPN	OP04	27	0.19	OP04
126	1j2b_D_C957_A958	NAN	NANT	0	0.53	AA00
127	1j2b_D_A958_A959	NAN	NANT	0	0.69	AA02
128	1j2b_D_A959_G960	NAN	NANT	0	1.85	AB02
129	1j2b_D_G960_U961	NAN	NANT	0	0.77	AAS1
130	1j2b_D_U961_C962	NAN	NANT	0	1.59	OP01
131	1j2b_D_C962_C963	AAw	AA06	44	0.57	AA06
132	1j2b_D_C963_C964	AAA	AA00	36	0.36	AA00
133	1j2b_D_C964_C965	AAA	AA00	52	0.29	AA00
134	1j2b_D_C965_G966	AAA	AA00	21	0.31	AA00
135	1j2b_D_G966_C967	AAA	AA00	47	0.26	AA00
136	1j2b_D_C967_G968	AAw	AA01	84	0.22	AA01
137	1j2b_D_G968_G969	AAA	AA08	35	0.35	AA08
138	1j2b_D_G969_G970	AAA	AA08	69	0.28	AA08
139	1j2b_D_G970_C971	AAA	AA00	47	0.24	AA00
140	1j2b_D_C971_C972	AAA	AA00	63	0.21	AA00
141	1j2b_D_C972_C973	AAA	AA08	79	0.15	AA08
142	1j2b_D_C973_A974	AAA	AA00	47	0.28	AA00
143	1j2b_D_A974_C975	AAA	AA08	75	0.32	AA08
144	1j2b_D_C975_C976	NAN	NANT	0	0.95	IC03
145	1j2b_D_C976_A977	NAN	NANT	0	2.23	IC04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 145 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible