DNATCO v4.1: results

NMR structure of HCV ires RNA domain IIIC

Results of the assignment of 90 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1idv-m10_A_G1_G2	AAA	AA08	8	0.38	AA08
02	1idv-m1_A_G1_G2	AAA	AA08	60	0.32	AA08
03	1idv-m2_A_G1_G2	NAN	NANT	0	0.53	AA03
04	1idv-m3_A_G1_G2	NAN	NANT	0	0.54	AA03
05	1idv-m4_A_G1_G2	AAA	AA03	22	0.52	AA03
06	1idv-m5_A_G1_G2	NAN	NANT	0	0.55	AA03
07	1idv-m6_A_G1_G2	AAA	AA08	58	0.34	AA08
08	1idv-m7_A_G1_G2	AAA	AA08	62	0.33	AA08
09	1idv-m8_A_G1_G2	AAA	AA08	29	0.39	AA08
10	1idv-m9_A_G1_G2	NAN	NANT	0	0.52	AA03
11	1idv-m10_A_G2_G3	AAA	AA03	25	0.36	AA03
12	1idv-m1_A_G2_G3	AAA	AA03	44	0.35	AA03
13	1idv-m2_A_G2_G3	AAA	AA03	18	0.36	AA03
14	1idv-m3_A_G2_G3	AAA	AA03	23	0.36	AA03
15	1idv-m4_A_G2_G3	AAA	AA03	25	0.36	AA03
16	1idv-m5_A_G2_G3	NAN	NANT	0	0.65	AB03
17	1idv-m6_A_G2_G3	AAA	AA00	24	0.36	AA00
18	1idv-m7_A_G2_G3	AAA	AA03	38	0.34	AA03
19	1idv-m8_A_G2_G3	AAA	AA03	40	0.32	AA03
20	1idv-m9_A_G2_G3	NAN	NANT	0	0.42	AA03
21	1idv-m10_A_G3_C4	NAN	NANT	0	1.45	IC02
22	1idv-m1_A_G3_C4	NAN	NANT	0	0.98	AA12
23	1idv-m2_A_G3_C4	NAN	NANT	0	1.34	IC03
24	1idv-m3_A_G3_C4	NAN	NANT	0	1.14	AA07
25	1idv-m4_A_G3_C4	NAN	NANT	0	1.03	AA07
26	1idv-m5_A_G3_C4	NAN	NANT	0	1.26	AA12
27	1idv-m6_A_G3_C4	NAN	NANT	0	1.03	IC07
28	1idv-m7_A_G3_C4	NAN	NANT	0	1.43	AA11
29	1idv-m8_A_G3_C4	NAN	NANT	0	1.14	AA07
30	1idv-m9_A_G3_C4	NAN	NANT	0	1.09	AA07
31	1idv-m10_A_C4_G5	NAN	NANT	0	1.15	AA01
32	1idv-m1_A_C4_G5	NAN	NANT	0	1.37	AA10
33	1idv-m2_A_C4_G5	NAN	NANT	0	1.08	AA01
34	1idv-m3_A_C4_G5	NAN	NANT	0	1.13	AA01
35	1idv-m4_A_C4_G5	NAN	NANT	0	1.35	AA10
36	1idv-m5_A_C4_G5	NAN	NANT	0	1.33	AB04
37	1idv-m6_A_C4_G5	NAN	NANT	0	1.14	AA01
38	1idv-m7_A_C4_G5	NAN	NANT	0	0.87	AB04
39	1idv-m8_A_C4_G5	NAN	NANT	0	1.32	AA10
40	1idv-m9_A_C4_G5	NAN	NANT	0	1.25	AB04
41	1idv-m10_A_G5_U6	NAN	NANT	0	0.50	AA00
42	1idv-m1_A_G5_U6	NAN	NANT	0	0.55	AA03
43	1idv-m2_A_G5_U6	NAN	NANT	0	0.48	AA03
44	1idv-m3_A_G5_U6	NAN	NANT	0	0.49	AA03
45	1idv-m4_A_G5_U6	NAN	NANT	0	0.55	AA03
46	1idv-m5_A_G5_U6	NAN	NANT	0	0.70	IC06
47	1idv-m6_A_G5_U6	NAN	NANT	0	0.54	AA03
48	1idv-m7_A_G5_U6	NAN	NANT	0	0.65	BA08
49	1idv-m8_A_G5_U6	NAN	NANT	0	0.57	AA03
50	1idv-m9_A_G5_U6	NAN	NANT	0	0.89	BA08
51	1idv-m10_A_U6_G7	AAw	AA05	51	0.27	AA05
52	1idv-m1_A_U6_G7	AAw	AA05	11	0.27	AA05
53	1idv-m2_A_U6_G7	AAw	AA05	41	0.24	AA05
54	1idv-m3_A_U6_G7	AAw	AA05	31	0.26	AA05
55	1idv-m4_A_U6_G7	AAw	AA05	17	0.22	AA05
56	1idv-m5_A_U6_G7	NAN	NANT	0	0.31	AA01
57	1idv-m6_A_U6_G7	NAN	NANT	0	1.36	OP24
58	1idv-m7_A_U6_G7	AAw	AA01	10	0.44	AA01
59	1idv-m8_A_U6_G7	AAw	AA05	22	0.27	AA05
60	1idv-m9_A_U6_G7	NAN	NANT	0	0.62	BB13
61	1idv-m10_A_G7_C8	NAN	NANT	0	0.77	AA04
62	1idv-m1_A_G7_C8	AAA	AA04	10	0.73	AA04
63	1idv-m2_A_G7_C8	AAA	AA04	17	0.71	AA04
64	1idv-m3_A_G7_C8	AAA	AA04	17	0.70	AA04
65	1idv-m4_A_G7_C8	AAA	AA04	12	0.73	AA04
66	1idv-m5_A_G7_C8	NAN	NANT	0	0.67	AA04
67	1idv-m6_A_G7_C8	AAA	AA04	22	0.64	AA04
68	1idv-m7_A_G7_C8	AAA	AA04	14	0.65	AA04
69	1idv-m8_A_G7_C8	AAA	AA04	11	0.74	AA04
70	1idv-m9_A_G7_C8	AAA	AA04	19	0.66	AA04
71	1idv-m10_A_C8_C9	AAA	AA09	43	0.37	AA09
72	1idv-m1_A_C8_C9	AAA	AA00	24	0.46	AA00
73	1idv-m2_A_C8_C9	AAA	AA00	35	0.43	AA00
74	1idv-m3_A_C8_C9	AAA	AA00	47	0.37	AA00
75	1idv-m4_A_C8_C9	AAA	AA00	20	0.45	AA00
76	1idv-m5_A_C8_C9	AAA	AA00	28	0.46	AA00
77	1idv-m6_A_C8_C9	AAA	AA08	25	0.43	AA08
78	1idv-m7_A_C8_C9	AAA	AA00	54	0.36	AA00
79	1idv-m8_A_C8_C9	AAA	AA04	53	0.34	AA04
80	1idv-m9_A_C8_C9	AAA	AA00	20	0.48	AA00
81	1idv-m10_A_C9_C10	AAw	AA06	10	0.47	AA06
82	1idv-m1_A_C9_C10	NAN	NANT	0	0.39	AA06
83	1idv-m2_A_C9_C10	NAN	NANT	0	0.53	AA11
84	1idv-m3_A_C9_C10	NAN	NANT	0	1.29	OP24
85	1idv-m4_A_C9_C10	NAN	NANT	0	0.52	AA11
86	1idv-m5_A_C9_C10	AAw	AA11	14	0.57	AA11
87	1idv-m6_A_C9_C10	NAN	NANT	0	0.81	BA09
88	1idv-m7_A_C9_C10	NAN	NANT	0	0.41	AA06
89	1idv-m8_A_C9_C10	AAw	AA06	19	0.40	AA06
90	1idv-m9_A_C9_C10	NAN	NANT	0	0.52	AA11

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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IC

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Z

N

Results of the assignment of 90 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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