DNATCO v4.1: results

RNA-PROTEIN INTERACTIONS: THE CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN S8/RRNA COMPLEX FROM METHANOCOCCUS JANNASCHII

Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	1i6u_C_G1_G2	AAA	AA00	79	0.11	AA00
02	1i6u_C_G2_G3	AAA	AA08	85	0.21	AA08
03	1i6u_C_G3_C4	AAA	AA00	68	0.26	AA00
04	1i6u_C_C4_C5	AAA	AA00	92	0.19	AA00
05	1i6u_C_C5_C6	AAA	AA00	50	0.23	AA00
06	1i6u_C_C6_G7	AAA	AA00	91	0.09	AA00
07	1i6u_C_G7_G8	AAA	AA00	85	0.19	AA00
08	1i6u_C_G8_U9	AAA	AA00	81	0.31	AA00
09	1i6u_C_U9_A10	NAN	NANT	0	0.50	AB03
10	1i6u_C_A10_A11	NAN	NANT	0	0.65	OP15
11	1i6u_C_A11_G12	AAA	AA00	62	0.29	AA00
12	1i6u_C_G12_U13	AAA	AA08	14	0.51	AA08
13	1i6u_C_U13_C14	AAA	AA00	95	0.10	AA00
14	1i6u_C_C14_U15	AAA	AA00	91	0.12	AA00
15	1i6u_C_U15_C16	AAA	AA00	88	0.15	AA00
16	1i6u_C_C16_U17	AAA	AA00	76	0.33	AA00
17	1i6u_C_U17_U18	NAN	NANT	0	0.20	OP09
18	1i6u_C_U18_C19	NAN	NANT	0	0.54	OP12
19	1i6u_C_C19_G20	NAN	NANT	0	2.08	AA01
20	1i6u_C_G20_G21	NAN	NANT	0	0.48	AA05
21	1i6u_C_G21_A22	AAA	AA00	91	0.14	AA00
22	1i6u_C_A22_G23	AAA	AA00	92	0.16	AA00
23	1i6u_C_G23_A24	AAA	AA00	90	0.25	AA00
24	1i6u_C_A24_U25	NAN	NANT	0	0.46	AB03
25	1i6u_C_U25_A26	NAN	NANT	0	1.08	AA13
26	1i6u_C_A26_C27	AAA	AA00	93	0.12	AA00
27	1i6u_C_C27_U28	AAA	AA00	82	0.21	AA00
28	1i6u_C_U28_G29	AAA	AA00	88	0.25	AA00
29	1i6u_C_G29_C30	AAA	AA00	88	0.19	AA00
30	1i6u_C_C30_C31	AAA	AA00	72	0.21	AA00
31	1i6u_C_C31_G32	AAA	AA00	85	0.17	AA00
32	1i6u_C_G32_G33	AAw	AA01	94	0.17	AA01
33	1i6u_C_G33_G34	AAA	AA08	68	0.19	AA08
34	1i6u_C_G34_C35	AAA	AA00	88	0.29	AA00
35	1i6u_C_C35_C36	AAA	AA00	60	0.28	AA00
36	1i6u_C_C36_C37	AAA	AA00	93	0.18	AA00
37	1i6u_D_G1_G2	AAA	AA08	80	0.18	AA08
38	1i6u_D_G2_G3	AAA	AA00	75	0.09	AA00
39	1i6u_D_G3_C4	AAA	AA00	88	0.07	AA00
40	1i6u_D_C4_C5	AAA	AA00	87	0.14	AA00
41	1i6u_D_C5_C6	AAA	AA00	71	0.19	AA00
42	1i6u_D_C6_G7	AAA	AA00	82	0.15	AA00
43	1i6u_D_G7_G8	AAA	AA00	85	0.15	AA00
44	1i6u_D_G8_U9	AAA	AA00	74	0.31	AA00
45	1i6u_D_U9_A10	NAN	NANT	0	0.54	AA09
46	1i6u_D_A10_A11	NAN	NANT	0	0.44	OP26
47	1i6u_D_A11_G12	AAA	AA00	88	0.24	AA00
48	1i6u_D_G12_U13	AAA	AA08	22	0.51	AA08
49	1i6u_D_U13_C14	AAA	AA00	83	0.16	AA00
50	1i6u_D_C14_U15	AAA	AA00	81	0.18	AA00
51	1i6u_D_U15_C16	AAA	AA00	93	0.16	AA00
52	1i6u_D_C16_U17	AAA	AA00	87	0.30	AA00
53	1i6u_D_U17_U18	NAN	NANT	0	0.62	OP03
54	1i6u_D_U18_C19	NAN	NANT	0	1.99	AA13
55	1i6u_D_C19_G20	NAN	NANT	0	0.40	ZZ1S
56	1i6u_D_G20_G21	NAN	NANT	0	0.50	AA05
57	1i6u_D_G21_A22	AAA	AA00	64	0.21	AA00
58	1i6u_D_A22_G23	AAw	AA01	97	0.14	AA01
59	1i6u_D_G23_A24	AAA	AA00	75	0.24	AA00
60	1i6u_D_A24_U25	NAN	NANT	0	0.45	AB03
61	1i6u_D_U25_A26	NAN	NANT	0	1.03	AA13
62	1i6u_D_A26_C27	AAA	AA00	95	0.14	AA00
63	1i6u_D_C27_U28	AAA	AA00	83	0.21	AA00
64	1i6u_D_U28_G29	AAA	AA00	85	0.28	AA00
65	1i6u_D_G29_C30	AAA	AA00	87	0.20	AA00
66	1i6u_D_C30_C31	AAA	AA00	72	0.23	AA00
67	1i6u_D_C31_G32	AAA	AA00	93	0.11	AA00
68	1i6u_D_G32_G33	AAA	AA00	84	0.17	AA00
69	1i6u_D_G33_G34	AAA	AA00	93	0.16	AA00
70	1i6u_D_G34_C35	AAA	AA00	96	0.09	AA00
71	1i6u_D_C35_C36	AAA	AA00	91	0.12	AA00
72	1i6u_D_C36_C37	AAA	AA00	85	0.20	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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