DNATCO v4.1: results

CHIMERIC ARABINONUCLEIC ACID (ANA) HAIRPIN WITH ANA/RNA HYBRID STEM

Results of the assignment of 110 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1ho6-m10_A_G1_G2	AAA	AA00	71	0.24	AA00
002	1ho6-m1_A_G1_G2	AAA	AA00	58	0.21	AA00
003	1ho6-m2_A_G1_G2	AAA	AA00	34	0.34	AA00
004	1ho6-m3_A_G1_G2	AAA	AA00	59	0.36	AA00
005	1ho6-m4_A_G1_G2	AAu	AA12	14	0.47	AA12
006	1ho6-m5_A_G1_G2	AAA	AA00	34	0.27	AA00
007	1ho6-m6_A_G1_G2	AAA	AA00	32	0.35	AA00
008	1ho6-m7_A_G1_G2	AAu	AA12	28	0.40	AA12
009	1ho6-m8_A_G1_G2	AAA	AA00	80	0.26	AA00
010	1ho6-m9_A_G1_G2	AAA	AA00	59	0.22	AA00
011	1ho6-m10_A_G2_A3	AAA	AA00	54	0.22	AA00
012	1ho6-m1_A_G2_A3	AAA	AA00	67	0.18	AA00
013	1ho6-m2_A_G2_A3	AAA	AA00	50	0.38	AA00
014	1ho6-m3_A_G2_A3	AAA	AA00	47	0.25	AA00
015	1ho6-m4_A_G2_A3	AAA	AA00	72	0.29	AA00
016	1ho6-m5_A_G2_A3	AAA	AA00	67	0.20	AA00
017	1ho6-m6_A_G2_A3	AAA	AA00	52	0.30	AA00
018	1ho6-m7_A_G2_A3	AAA	AA00	82	0.23	AA00
019	1ho6-m8_A_G2_A3	AAA	AA00	46	0.23	AA00
020	1ho6-m9_A_G2_A3	AAA	AA00	39	0.24	AA00
021	1ho6-m10_A_A3_C4	AAA	AA00	36	0.42	AA00
022	1ho6-m1_A_A3_C4	AAA	AA00	33	0.32	AA00
023	1ho6-m2_A_A3_C4	AAA	AA00	70	0.22	AA00
024	1ho6-m3_A_A3_C4	AAA	AA00	38	0.33	AA00
025	1ho6-m4_A_A3_C4	AAA	AA00	73	0.23	AA00
026	1ho6-m5_A_A3_C4	AAA	AA00	62	0.23	AA00
027	1ho6-m6_A_A3_C4	AAA	AA00	31	0.35	AA00
028	1ho6-m7_A_A3_C4	AAA	AA00	65	0.23	AA00
029	1ho6-m8_A_A3_C4	AAA	AA00	53	0.37	AA00
030	1ho6-m9_A_A3_C4	AAA	AA00	43	0.32	AA00
031	1ho6-m10_A_C4_DT5	AAA	AA00	54	0.23	AA00
032	1ho6-m1_A_C4_DT5	AAA	AA00	16	0.34	AA00
033	1ho6-m2_A_C4_DT5	AAA	AA08	26	0.47	AA08
034	1ho6-m3_A_C4_DT5	AAA	AA04	23	0.68	AA04
035	1ho6-m4_A_C4_DT5	AAA	AA00	10	0.62	AA00
036	1ho6-m5_A_C4_DT5	AAA	AA00	22	0.48	AA00
037	1ho6-m6_A_C4_DT5	AAA	AA00	28	0.39	AA00
038	1ho6-m7_A_C4_DT5	AAA	AA00	34	0.34	AA00
039	1ho6-m8_A_C4_DT5	AAA	AA08	22	0.40	AA08
040	1ho6-m9_A_C4_DT5	AAA	AA00	14	0.35	AA00
041	1ho6-m10_A_DT5_DT6	A-B	AB01	9	0.66	AB01
042	1ho6-m1_A_DT5_DT6	A-B	AB01	27	0.41	AB01
043	1ho6-m2_A_DT5_DT6	NAN	NANT	0	0.90	AB05
044	1ho6-m3_A_DT5_DT6	A-B	AB05	19	0.45	AB05
045	1ho6-m4_A_DT5_DT6	NAN	NANT	0	0.86	AB05
046	1ho6-m5_A_DT5_DT6	A-B	AB01	14	0.44	AB01
047	1ho6-m6_A_DT5_DT6	NAN	NANT	0	0.79	AB05
048	1ho6-m7_A_DT5_DT6	A-B	AB05	17	0.54	AB05
049	1ho6-m8_A_DT5_DT6	NAN	NANT	0	0.74	AB05
050	1ho6-m9_A_DT5_DT6	A-B	AB01	34	0.38	AB01
051	1ho6-m10_A_DT6_DC7	NAN	NANT	0	0.40	BB01
052	1ho6-m1_A_DT6_DC7	BBB	BB01	54	0.27	BB01
053	1ho6-m2_A_DT6_DC7	NAN	NANT	0	0.91	BB07
054	1ho6-m3_A_DT6_DC7	B12	BB04	20	0.63	BB04
055	1ho6-m4_A_DT6_DC7	NAN	NANT	0	2.04	IC01
056	1ho6-m5_A_DT6_DC7	NAN	NANT	0	0.99	OP12
057	1ho6-m6_A_DT6_DC7	NAN	NANT	0	0.97	OP22
058	1ho6-m7_A_DT6_DC7	NAN	NANT	0	0.71	BB04
059	1ho6-m8_A_DT6_DC7	NAN	NANT	0	0.50	ZZ02
060	1ho6-m9_A_DT6_DC7	NAN	NANT	0	2.45	IC05
061	1ho6-m10_A_DC7_DG8	NAN	NANT	0	0.62	ZZ2S
062	1ho6-m1_A_DC7_DG8	NAN	NANT	0	0.80	OP24
063	1ho6-m2_A_DC7_DG8	NAN	NANT	0	0.95	ZZ2S
064	1ho6-m3_A_DC7_DG8	NAN	NANT	0	0.91	ZZ2S
065	1ho6-m4_A_DC7_DG8	NAN	NANT	0	1.31	IC04
066	1ho6-m5_A_DC7_DG8	NAN	NANT	0	0.82	ZZ2S
067	1ho6-m6_A_DC7_DG8	NAN	NANT	0	0.51	ZZ2S
068	1ho6-m7_A_DC7_DG8	NAN	NANT	0	1.26	BB08
069	1ho6-m8_A_DC7_DG8	NAN	NANT	0	0.71	AB1S
070	1ho6-m9_A_DC7_DG8	NAN	NANT	0	1.62	OP1S
071	1ho6-m10_A_DG8_GAO9	SYN	BBS1	19	0.52	BBS1
072	1ho6-m1_A_DG8_GAO9	NAN	NANT	0	0.67	OP15
073	1ho6-m2_A_DG8_GAO9	NAN	NANT	0	0.96	AA03
074	1ho6-m3_A_DG8_GAO9	NAN	NANT	0	0.50	BBS1
075	1ho6-m4_A_DG8_GAO9	NAN	NANT	0	0.85	AB03
076	1ho6-m5_A_DG8_GAO9	NAN	NANT	0	1.66	ZZS1
077	1ho6-m6_A_DG8_GAO9	NAN	NANT	0	0.98	BB10
078	1ho6-m7_A_DG8_GAO9	NAN	NANT	0	0.61	BB04
079	1ho6-m8_A_DG8_GAO9	NAN	NANT	0	1.25	BBS1
080	1ho6-m9_A_DG8_GAO9	NAN	NANT	0	0.96	AA07
081	1ho6-m10_A_GAO9_UAR10	B-A	BA05	38	0.26	BA05
082	1ho6-m1_A_GAO9_UAR10	B-A	BA05	67	0.26	BA05
083	1ho6-m2_A_GAO9_UAR10	B-A	BA05	45	0.29	BA05
084	1ho6-m3_A_GAO9_UAR10	B-A	BA05	52	0.37	BA05
085	1ho6-m4_A_GAO9_UAR10	B-A	BA05	42	0.33	BA05
086	1ho6-m5_A_GAO9_UAR10	B-A	BA05	36	0.39	BA05
087	1ho6-m6_A_GAO9_UAR10	B-A	BA05	56	0.30	BA05
088	1ho6-m7_A_GAO9_UAR10	BBB	BB01	22	0.22	BB01
089	1ho6-m8_A_GAO9_UAR10	B-A	BA05	21	0.32	BA05
090	1ho6-m9_A_GAO9_UAR10	B-A	BA05	55	0.23	BA05
091	1ho6-m10_A_UAR10_CAR11	NAN	NANT	0	0.49	AA00
092	1ho6-m1_A_UAR10_CAR11	B-A	BA05	39	0.25	BA05
093	1ho6-m2_A_UAR10_CAR11	AAA	AA02	28	0.57	AA02
094	1ho6-m3_A_UAR10_CAR11	NAN	NANT	0	0.52	AA00
095	1ho6-m4_A_UAR10_CAR11	AAA	AA02	19	0.56	AA02
096	1ho6-m5_A_UAR10_CAR11	NAN	NANT	0	0.49	AA00
097	1ho6-m6_A_UAR10_CAR11	AAA	AA02	30	0.55	AA02
098	1ho6-m7_A_UAR10_CAR11	B-A	BA05	33	0.22	BA05
099	1ho6-m8_A_UAR10_CAR11	NAN	NANT	0	0.47	AA00
100	1ho6-m9_A_UAR10_CAR11	B-A	BA05	45	0.27	BA05
101	1ho6-m10_A_CAR11_CAR12	NAN	NANT	0	0.47	AA00
102	1ho6-m1_A_CAR11_CAR12	NAN	NANT	0	0.51	AA00
103	1ho6-m2_A_CAR11_CAR12	AAA	AA02	11	0.62	AA02
104	1ho6-m3_A_CAR11_CAR12	NAN	NANT	0	0.45	AA00
105	1ho6-m4_A_CAR11_CAR12	B-A	BA05	17	0.21	BA05
106	1ho6-m5_A_CAR11_CAR12	NAN	NANT	0	0.47	AA00
107	1ho6-m6_A_CAR11_CAR12	B-A	BA05	32	0.22	BA05
108	1ho6-m7_A_CAR11_CAR12	B-A	BA05	19	0.19	BA05
109	1ho6-m8_A_CAR11_CAR12	NAN	NANT	0	0.47	AA00
110	1ho6-m9_A_CAR11_CAR12	NAN	NANT	0	0.49	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 110 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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