DNATCO v4.1: results

CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX

Results of the assignment of 114 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1hc8_C_GTP101_C102	AAA	AA00	70	0.20	AA00
002	1hc8_C_C102_C103	AAA	AA00	76	0.20	AA00
003	1hc8_C_C103_A104	AAA	AA00	88	0.17	AA00
004	1hc8_C_A104_G105	AAw	AA06	91	0.14	AA06
005	1hc8_C_G105_G106	AAA	AA08	64	0.44	AA08
006	1hc8_C_G106_A107	NAN	NANT	0	2.50	OP18
007	1hc8_C_A107_U108	AAA	AA08	40	0.35	AA08
008	1hc8_C_U108_G109	AAA	AA00	42	0.30	AA00
009	1hc8_C_G109_U110	ZZZ	ZZ01	74	0.27	ZZ01
010	1hc8_C_U110_A111	OPN	OP18	95	0.20	OP18
011	1hc8_C_A111_G112	OPN	OP13	50	0.40	OP13
012	1hc8_C_G112_G113	AAA	AA00	65	0.18	AA00
013	1hc8_C_G113_C114	AAA	AA00	86	0.34	AA00
014	1hc8_C_C114_U115	AAA	AA08	61	0.38	AA08
015	1hc8_C_U115_U116	AAA	AA00	38	0.42	AA00
016	1hc8_C_U116_A117	OPN	OP04	81	0.23	OP04
017	1hc8_C_A117_G118	AAA	AA00	39	0.39	AA00
018	1hc8_C_G118_A119	NAN	NANT	0	0.62	AB01
019	1hc8_C_A119_A120	NAN	NANT	0	0.80	OP19
020	1hc8_C_A120_G121	NAN	NANT	0	1.16	OP05
021	1hc8_C_G121_C122	AAA	AA08	63	0.21	AA08
022	1hc8_C_C122_A123	NAN	NANT	0	0.31	OP30
023	1hc8_C_A123_G124	AAA	AA00	49	0.38	AA00
024	1hc8_C_G124_C125	AAA	AA00	38	0.27	AA00
025	1hc8_C_C125_C126	AAA	AA00	91	0.18	AA00
026	1hc8_C_C126_A127	AAw	AA01	91	0.12	AA01
027	1hc8_C_A127_U128	AAA	AA00	40	0.43	AA00
028	1hc8_C_U128_C129	NAN	NANT	0	1.50	OP24
029	1hc8_C_C129_A130	AAA	AA08	89	0.25	AA08
030	1hc8_C_A130_U131	AAA	AA00	82	0.24	AA00
031	1hc8_C_U131_U132	AAA	AA00	86	0.28	AA00
032	1hc8_C_U132_U133	AAw	AA10	56	0.37	AA10
033	1hc8_C_U133_A134	OPN	OP04	65	0.13	OP04
034	1hc8_C_A134_A135	AAA	AA00	63	0.28	AA00
035	1hc8_C_A135_A136	NAN	NANT	0	0.45	AB2S
036	1hc8_C_A136_G137	NAN	NANT	0	0.57	OP28
037	1hc8_C_G137_A138	NAN	NANT	0	0.89	OP17
038	1hc8_C_A138_A139	NAN	NANT	0	1.58	OP16
039	1hc8_C_A139_A140	NAN	NANT	0	0.63	OP26
040	1hc8_C_A140_G141	AAw	AA01	54	0.37	AA01
041	1hc8_C_G141_C142	AAA	AA08	80	0.19	AA08
042	1hc8_C_C142_G143	AAA	AA00	24	0.53	AA00
043	1hc8_C_G143_U144	AAA	AA00	31	0.40	AA00
044	1hc8_C_U144_A145	OPN	OP04	83	0.18	OP04
045	1hc8_C_A145_A146	AAA	AA00	60	0.33	AA00
046	1hc8_C_A146_U147	AAw	AA01	79	0.26	AA01
047	1hc8_C_U147_A148	NAN	NANT	0	0.74	AA08
048	1hc8_C_A148_G149	AAA	AA00	12	0.50	AA00
049	1hc8_C_G149_C150	AAA	AA00	84	0.16	AA00
050	1hc8_C_C150_U151	AAA	AA00	86	0.23	AA00
051	1hc8_C_U151_C152	AAA	AA00	77	0.31	AA00
052	1hc8_C_C152_A153	AAA	AA00	72	0.24	AA00
053	1hc8_C_A153_C154	AAA	AA08	27	0.50	AA08
054	1hc8_C_C154_U155	AAA	AA00	69	0.21	AA00
055	1hc8_C_U155_G156	AAA	AA00	91	0.14	AA00
056	1hc8_C_G156_G157	AAA	AA00	91	0.17	AA00
057	1hc8_C_G157_U158	AAA	AA08	87	0.17	AA08
058	1hc8_D_GTP301_C302	AAA	AA00	66	0.27	AA00
059	1hc8_D_C302_C303	AAA	AA00	83	0.18	AA00
060	1hc8_D_C303_A304	AAA	AA00	86	0.25	AA00
061	1hc8_D_A304_G305	AAw	AA01	68	0.20	AA01
062	1hc8_D_G305_G306	NAN	NANT	0	0.56	AA00
063	1hc8_D_G306_A307	NAN	NANT	0	2.49	OP18
064	1hc8_D_A307_U308	AAA	AA08	19	0.39	AA08
065	1hc8_D_U308_G309	AAA	AA00	33	0.32	AA00
066	1hc8_D_G309_U310	ZZZ	ZZ01	57	0.30	ZZ01
067	1hc8_D_U310_A311	OPN	OP18	84	0.22	OP18
068	1hc8_D_A311_G312	OPN	OP13	45	0.34	OP13
069	1hc8_D_G312_G313	AAA	AA08	88	0.21	AA08
070	1hc8_D_G313_C314	AAA	AA00	78	0.30	AA00
071	1hc8_D_C314_U315	AAA	AA00	57	0.36	AA00
072	1hc8_D_U315_U316	AAA	AA00	57	0.34	AA00
073	1hc8_D_U316_A317	OPN	OP04	89	0.17	OP04
074	1hc8_D_A317_G318	AAA	AA00	60	0.37	AA00
075	1hc8_D_G318_A319	NAN	NANT	0	0.45	AB04
076	1hc8_D_A319_A320	NAN	NANT	0	0.78	OP19
077	1hc8_D_A320_G321	NAN	NANT	0	1.14	OP05
078	1hc8_D_G321_C322	AAA	AA08	78	0.23	AA08
079	1hc8_D_C322_A323	NAN	NANT	0	0.33	OP30
080	1hc8_D_A323_G324	AAA	AA00	33	0.46	AA00
081	1hc8_D_G324_C325	AAA	AA00	71	0.21	AA00
082	1hc8_D_C325_C326	AAA	AA00	73	0.27	AA00
083	1hc8_D_C326_A327	AAw	AA01	86	0.20	AA01
084	1hc8_D_A327_U328	AAA	AA04	56	0.52	AA04
085	1hc8_D_U328_C329	NAN	NANT	0	1.41	OP24
086	1hc8_D_C329_A330	NAN	NANT	0	0.55	AA10
087	1hc8_D_A330_U331	AAA	AA08	41	0.33	AA08
088	1hc8_D_U331_U332	AAw	AA01	52	0.34	AA01
089	1hc8_D_U332_U333	AAA	AA08	77	0.40	AA08
090	1hc8_D_U333_A334	OPN	OP04	87	0.15	OP04
091	1hc8_D_A334_A335	AAA	AA00	75	0.26	AA00
092	1hc8_D_A335_A336	NAN	NANT	0	0.43	AB2S
093	1hc8_D_A336_G337	NAN	NANT	0	0.59	OP28
094	1hc8_D_G337_A338	NAN	NANT	0	0.81	OP17
095	1hc8_D_A338_A339	NAN	NANT	0	1.52	OP16
096	1hc8_D_A339_A340	NAN	NANT	0	0.59	OP26
097	1hc8_D_A340_G341	AAw	AA01	56	0.33	AA01
098	1hc8_D_G341_C342	AAA	AA00	76	0.16	AA00
099	1hc8_D_C342_G343	AAA	AA00	33	0.50	AA00
100	1hc8_D_G343_U344	AAA	AA00	62	0.29	AA00
101	1hc8_D_U344_A345	OPN	OP03	76	0.33	OP03
102	1hc8_D_A345_A346	AAA	AA00	75	0.27	AA00
103	1hc8_D_A346_U347	AAw	AA01	35	0.25	AA01
104	1hc8_D_U347_A348	AAA	AA08	12	0.69	AA08
105	1hc8_D_A348_G349	AAA	AA00	14	0.52	AA00
106	1hc8_D_G349_C350	AAA	AA00	46	0.30	AA00
107	1hc8_D_C350_U351	AAw	AA01	83	0.19	AA01
108	1hc8_D_U351_C352	AAA	AA08	62	0.32	AA08
109	1hc8_D_C352_A353	AAA	AA00	71	0.22	AA00
110	1hc8_D_A353_C354	AAA	AA08	16	0.53	AA08
111	1hc8_D_C354_U355	AAA	AA00	72	0.21	AA00
112	1hc8_D_U355_G356	AAA	AA00	95	0.12	AA00
113	1hc8_D_G356_G357	AAA	AA00	91	0.20	AA00
114	1hc8_D_G357_U358	AAw	AA01	63	0.24	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 114 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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