DNATCO v4.1: results

HUMAN IMMUNODEFICIENCY VIRUS-1 OKAZAKI FRAGMENT, DNA-RNA CHIMERA, NMR, 11 STRUCTURES

Results of the assignment of 154 detected steps in 11 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1gtc-m10_A_DG1_DC2	BBB	BB00	71	0.28	BB00
002	1gtc-m11_A_DG1_DC2	BBB	BB01	61	0.22	BB01
003	1gtc-m1_A_DG1_DC2	BBB	BB00	70	0.29	BB00
004	1gtc-m2_A_DG1_DC2	BBB	BB01	61	0.20	BB01
005	1gtc-m3_A_DG1_DC2	BBB	BB01	58	0.20	BB01
006	1gtc-m4_A_DG1_DC2	BBB	BB01	60	0.20	BB01
007	1gtc-m5_A_DG1_DC2	BBB	BB01	62	0.20	BB01
008	1gtc-m6_A_DG1_DC2	BBB	BB00	72	0.28	BB00
009	1gtc-m7_A_DG1_DC2	BBB	BB00	71	0.28	BB00
010	1gtc-m8_A_DG1_DC2	BBB	BB00	71	0.28	BB00
011	1gtc-m9_A_DG1_DC2	BBB	BB00	71	0.28	BB00
012	1gtc-m10_A_DC2_DA3	BBB	BB00	65	0.36	BB00
013	1gtc-m11_A_DC2_DA3	BBB	BB00	64	0.36	BB00
014	1gtc-m1_A_DC2_DA3	BBB	BB00	60	0.38	BB00
015	1gtc-m2_A_DC2_DA3	BBB	BB00	65	0.35	BB00
016	1gtc-m3_A_DC2_DA3	BBB	BB00	64	0.35	BB00
017	1gtc-m4_A_DC2_DA3	BBB	BB00	65	0.35	BB00
018	1gtc-m5_A_DC2_DA3	BBB	BB00	65	0.35	BB00
019	1gtc-m6_A_DC2_DA3	BBB	BB00	65	0.36	BB00
020	1gtc-m7_A_DC2_DA3	BBB	BB00	64	0.36	BB00
021	1gtc-m8_A_DC2_DA3	BBB	BB00	64	0.36	BB00
022	1gtc-m9_A_DC2_DA3	BBB	BB00	66	0.36	BB00
023	1gtc-m10_A_DA3_DG4	BBB	BB01	64	0.20	BB01
024	1gtc-m11_A_DA3_DG4	BBB	BB01	65	0.20	BB01
025	1gtc-m1_A_DA3_DG4	BBB	BB01	67	0.21	BB01
026	1gtc-m2_A_DA3_DG4	BBB	BB01	64	0.20	BB01
027	1gtc-m3_A_DA3_DG4	BBB	BB01	66	0.20	BB01
028	1gtc-m4_A_DA3_DG4	BBB	BB01	66	0.20	BB01
029	1gtc-m5_A_DA3_DG4	BBB	BB01	65	0.20	BB01
030	1gtc-m6_A_DA3_DG4	BBB	BB01	65	0.20	BB01
031	1gtc-m7_A_DA3_DG4	BBB	BB01	64	0.20	BB01
032	1gtc-m8_A_DA3_DG4	BBB	BB01	64	0.20	BB01
033	1gtc-m9_A_DA3_DG4	BBB	BB01	65	0.20	BB01
034	1gtc-m10_A_DG4_DT5	BBB	BB01	59	0.22	BB01
035	1gtc-m11_A_DG4_DT5	BBB	BB01	59	0.22	BB01
036	1gtc-m1_A_DG4_DT5	BBB	BB01	57	0.23	BB01
037	1gtc-m2_A_DG4_DT5	BBB	BB01	60	0.22	BB01
038	1gtc-m3_A_DG4_DT5	BBB	BB01	61	0.22	BB01
039	1gtc-m4_A_DG4_DT5	BBB	BB01	62	0.22	BB01
040	1gtc-m5_A_DG4_DT5	BBB	BB01	58	0.22	BB01
041	1gtc-m6_A_DG4_DT5	BBB	BB01	60	0.22	BB01
042	1gtc-m7_A_DG4_DT5	BBB	BB01	59	0.22	BB01
043	1gtc-m8_A_DG4_DT5	BBB	BB01	59	0.22	BB01
044	1gtc-m9_A_DG4_DT5	BBB	BB01	59	0.22	BB01
045	1gtc-m10_A_DT5_DG6	BBB	BB01	63	0.20	BB01
046	1gtc-m11_A_DT5_DG6	BBB	BB01	59	0.21	BB01
047	1gtc-m1_A_DT5_DG6	BBB	BB01	54	0.22	BB01
048	1gtc-m2_A_DT5_DG6	BBB	BB01	63	0.20	BB01
049	1gtc-m3_A_DT5_DG6	BBB	BB01	60	0.20	BB01
050	1gtc-m4_A_DT5_DG6	BBB	BB01	58	0.21	BB01
051	1gtc-m5_A_DT5_DG6	BBB	BB01	61	0.20	BB01
052	1gtc-m6_A_DT5_DG6	BBB	BB01	61	0.20	BB01
053	1gtc-m7_A_DT5_DG6	BBB	BB01	56	0.21	BB01
054	1gtc-m8_A_DT5_DG6	BBB	BB01	56	0.21	BB01
055	1gtc-m9_A_DT5_DG6	BBB	BB01	60	0.20	BB01
056	1gtc-m10_A_DG6_DG7	BBB	BB01	67	0.19	BB01
057	1gtc-m11_A_DG6_DG7	BBB	BB01	61	0.20	BB01
058	1gtc-m1_A_DG6_DG7	BBB	BB01	49	0.22	BB01
059	1gtc-m2_A_DG6_DG7	BBB	BB01	67	0.19	BB01
060	1gtc-m3_A_DG6_DG7	BBB	BB01	67	0.19	BB01
061	1gtc-m4_A_DG6_DG7	BBB	BB01	63	0.19	BB01
062	1gtc-m5_A_DG6_DG7	BBB	BB01	66	0.20	BB01
063	1gtc-m6_A_DG6_DG7	BBB	BB01	66	0.19	BB01
064	1gtc-m7_A_DG6_DG7	BBB	BB01	67	0.19	BB01
065	1gtc-m8_A_DG6_DG7	BBB	BB01	60	0.20	BB01
066	1gtc-m9_A_DG6_DG7	BBB	BB01	66	0.19	BB01
067	1gtc-m10_A_DG7_DC8	BBB	BB01	25	0.30	BB01
068	1gtc-m11_A_DG7_DC8	BBB	BB01	19	0.31	BB01
069	1gtc-m1_A_DG7_DC8	BBB	BB01	25	0.30	BB01
070	1gtc-m2_A_DG7_DC8	BBB	BB01	22	0.31	BB01
071	1gtc-m3_A_DG7_DC8	BBB	BB01	21	0.31	BB01
072	1gtc-m4_A_DG7_DC8	BBB	BB01	18	0.31	BB01
073	1gtc-m5_A_DG7_DC8	NAN	NANT	0	0.43	BA10
074	1gtc-m6_A_DG7_DC8	BBB	BB01	14	0.32	BB01
075	1gtc-m7_A_DG7_DC8	BBB	BB01	19	0.31	BB01
076	1gtc-m8_A_DG7_DC8	BBB	BB01	17	0.31	BB01
077	1gtc-m9_A_DG7_DC8	BBB	BB01	22	0.32	BB01
078	1gtc-m10_B_G1_C2	AAA	AA04	79	0.28	AA04
079	1gtc-m11_B_G1_C2	AAA	AA00	45	0.40	AA00
080	1gtc-m1_B_G1_C2	AAA	AA00	53	0.30	AA00
081	1gtc-m2_B_G1_C2	AAA	AA00	51	0.27	AA00
082	1gtc-m3_B_G1_C2	AAA	AA00	52	0.28	AA00
083	1gtc-m4_B_G1_C2	AAA	AA04	78	0.37	AA04
084	1gtc-m5_B_G1_C2	AAA	AA00	52	0.27	AA00
085	1gtc-m6_B_G1_C2	AAA	AA00	54	0.27	AA00
086	1gtc-m7_B_G1_C2	AAA	AA00	48	0.27	AA00
087	1gtc-m8_B_G1_C2	AAA	AA04	78	0.37	AA04
088	1gtc-m9_B_G1_C2	AAA	AA00	53	0.28	AA00
089	1gtc-m10_B_C2_C3	AAA	AA00	46	0.33	AA00
090	1gtc-m11_B_C2_C3	AAA	AA00	45	0.35	AA00
091	1gtc-m1_B_C2_C3	AAA	AA04	78	0.34	AA04
092	1gtc-m2_B_C2_C3	AAA	AA00	46	0.33	AA00
093	1gtc-m3_B_C2_C3	AAA	AA00	44	0.33	AA00
094	1gtc-m4_B_C2_C3	AAA	AA00	45	0.37	AA00
095	1gtc-m5_B_C2_C3	AAA	AA00	43	0.34	AA00
096	1gtc-m6_B_C2_C3	AAA	AA00	45	0.34	AA00
097	1gtc-m7_B_C2_C3	AAA	AA00	43	0.36	AA00
098	1gtc-m8_B_C2_C3	AAA	AA00	45	0.37	AA00
099	1gtc-m9_B_C2_C3	AAA	AA00	46	0.34	AA00
100	1gtc-m10_B_C3_A4	AAA	AA00	60	0.26	AA00
101	1gtc-m11_B_C3_A4	AAA	AA00	57	0.27	AA00
102	1gtc-m1_B_C3_A4	AAA	AA00	28	0.34	AA00
103	1gtc-m2_B_C3_A4	AAA	AA00	60	0.27	AA00
104	1gtc-m3_B_C3_A4	AAA	AA00	59	0.27	AA00
105	1gtc-m4_B_C3_A4	AAA	AA00	57	0.27	AA00
106	1gtc-m5_B_C3_A4	AAA	AA00	58	0.27	AA00
107	1gtc-m6_B_C3_A4	AAA	AA00	61	0.27	AA00
108	1gtc-m7_B_C3_A4	AAA	AA00	55	0.28	AA00
109	1gtc-m8_B_C3_A4	AAA	AA00	58	0.27	AA00
110	1gtc-m9_B_C3_A4	AAA	AA00	59	0.27	AA00
111	1gtc-m10_B_A4_DC5	AAA	AA00	11	0.33	AA00
112	1gtc-m11_B_A4_DC5	AAA	AA00	10	0.33	AA00
113	1gtc-m1_B_A4_DC5	AAA	AA00	44	0.43	AA00
114	1gtc-m2_B_A4_DC5	AAA	AA00	11	0.33	AA00
115	1gtc-m3_B_A4_DC5	AAA	AA00	10	0.33	AA00
116	1gtc-m4_B_A4_DC5	AAA	AA00	10	0.33	AA00
117	1gtc-m5_B_A4_DC5	AAA	AA04	41	0.28	AA04
118	1gtc-m6_B_A4_DC5	AAA	AA00	11	0.33	AA00
119	1gtc-m7_B_A4_DC5	AAA	AA00	11	0.33	AA00
120	1gtc-m8_B_A4_DC5	AAA	AA00	12	0.33	AA00
121	1gtc-m9_B_A4_DC5	AAA	AA04	42	0.28	AA04
122	1gtc-m10_B_DC5_DT6	A-B	AB01	10	0.38	AB01
123	1gtc-m11_B_DC5_DT6	A-B	AB01	9	0.38	AB01
124	1gtc-m1_B_DC5_DT6	A-B	AB01	26	0.39	AB01
125	1gtc-m2_B_DC5_DT6	A-B	AB01	10	0.38	AB01
126	1gtc-m3_B_DC5_DT6	A-B	AB01	9	0.38	AB01
127	1gtc-m4_B_DC5_DT6	A-B	AB01	9	0.38	AB01
128	1gtc-m5_B_DC5_DT6	NAN	NANT	0	0.79	BB16
129	1gtc-m6_B_DC5_DT6	A-B	AB01	10	0.38	AB01
130	1gtc-m7_B_DC5_DT6	A-B	AB01	10	0.38	AB01
131	1gtc-m8_B_DC5_DT6	A-B	AB01	10	0.38	AB01
132	1gtc-m9_B_DC5_DT6	NAN	NANT	0	0.79	BB16
133	1gtc-m10_B_DT6_DG7	BBB	BB01	69	0.23	BB01
134	1gtc-m11_B_DT6_DG7	BBB	BB01	68	0.24	BB01
135	1gtc-m1_B_DT6_DG7	BBB	BB01	74	0.21	BB01
136	1gtc-m2_B_DT6_DG7	BBB	BB01	71	0.23	BB01
137	1gtc-m3_B_DT6_DG7	BBB	BB01	68	0.23	BB01
138	1gtc-m4_B_DT6_DG7	BBB	BB01	69	0.23	BB01
139	1gtc-m5_B_DT6_DG7	BBB	BB01	69	0.23	BB01
140	1gtc-m6_B_DT6_DG7	BBB	BB01	71	0.23	BB01
141	1gtc-m7_B_DT6_DG7	BBB	BB01	69	0.23	BB01
142	1gtc-m8_B_DT6_DG7	BBB	BB01	69	0.23	BB01
143	1gtc-m9_B_DT6_DG7	BBB	BB01	68	0.23	BB01
144	1gtc-m10_B_DG7_DC8	B-A	BA05	15	0.28	BA05
145	1gtc-m11_B_DG7_DC8	B-A	BA05	17	0.28	BA05
146	1gtc-m1_B_DG7_DC8	B-A	BA05	16	0.32	BA05
147	1gtc-m2_B_DG7_DC8	B-A	BA05	19	0.28	BA05
148	1gtc-m3_B_DG7_DC8	B-A	BA05	19	0.31	BA05
149	1gtc-m4_B_DG7_DC8	B-A	BA05	16	0.31	BA05
150	1gtc-m5_B_DG7_DC8	B-A	BA05	25	0.28	BA05
151	1gtc-m6_B_DG7_DC8	B-A	BA05	12	0.29	BA05
152	1gtc-m7_B_DG7_DC8	B-A	BA05	14	0.29	BA05
153	1gtc-m8_B_DG7_DC8	B-A	BA05	17	0.29	BA05
154	1gtc-m9_B_DG7_DC8	B-A	BA05	17	0.29	BA05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 154 detected steps in 11 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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